RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 C1orf115Q9H7X2 142 aa21.52■■□□□ 1.04
PHGDH-211ENST00000641213 ABTB2Q8N961 1025 aa21.52■■□□□ 1.04
PHGDH-211ENST00000641213 NWD1Q149M9 1564 aa21.51■■□□□ 1.03
PHGDH-211ENST00000641213 HOXC9P31274 260 aa21.51■■□□□ 1.03
PHGDH-211ENST00000641213 LRRC37A3O60309 1634 aa21.51■■□□□ 1.03
PHGDH-211ENST00000641213 UPF2Q9HAU5 1272 aaKnown RBP21.51■■□□□ 1.03
PHGDH-211ENST00000641213 PHF8Q9UPP1 1060 aa21.51■■□□□ 1.03
PHGDH-211ENST00000641213 RGS12O14924 1447 aa21.5■■□□□ 1.03
PHGDH-211ENST00000641213 CHD1LQ86WJ1 897 aa21.49■■□□□ 1.03
PHGDH-211ENST00000641213 RTF1Q92541 710 aaKnown RBP21.49■■□□□ 1.03
PHGDH-211ENST00000641213 TBC1D32Q96NH3 1257 aa21.49■■□□□ 1.03
PHGDH-211ENST00000641213 SIRT2Q8IXJ6 389 aa21.49■■□□□ 1.03
PHGDH-211ENST00000641213 GAS2L2Q8NHY3 880 aa21.49■■□□□ 1.03
PHGDH-211ENST00000641213 GCC1Q96CN9 775 aa21.49■■□□□ 1.03
PHGDH-211ENST00000641213 LNPKQ9C0E8 428 aa21.48■■□□□ 1.03
PHGDH-211ENST00000641213 USP35Q9P2H5 1018 aa21.48■■□□□ 1.03
PHGDH-211ENST00000641213 INTS3Q68E01 1043 aaKnown RBP21.48■■□□□ 1.03
PHGDH-211ENST00000641213 RBM33Q96EV2 1170 aaKnown RBP21.48■■□□□ 1.03
PHGDH-211ENST00000641213 MIS18AQ9NYP9 233 aa21.48■■□□□ 1.03
PHGDH-211ENST00000641213 ADGRL3Q9HAR2 1447 aa21.47■■□□□ 1.03
PHGDH-211ENST00000641213 DEKP35659 375 aaKnown RBP21.46■■□□□ 1.03
PHGDH-211ENST00000641213 TSPYL4Q9UJ04 414 aa21.45■■□□□ 1.02
PHGDH-211ENST00000641213 HTATSF1O43719 755 aaKnown RBP21.44■■□□□ 1.02
PHGDH-211ENST00000641213 ANKRD45Q5TZF3 282 aa21.44■■□□□ 1.02
PHGDH-211ENST00000641213 C14orf37Q86TY3 774 aa21.44■■□□□ 1.02
PHGDH-211ENST00000641213 RTL1A6NKG5 1358 aa21.44■■□□□ 1.02
PHGDH-211ENST00000641213 PTPRCP08575 1304 aa21.44■■□□□ 1.02
PHGDH-211ENST00000641213 CACNA1FO60840 1977 aa21.44■■□□□ 1.02
PHGDH-211ENST00000641213 NFAT5O94916 1531 aa21.43■■□□□ 1.02
PHGDH-211ENST00000641213 BECN1Q14457 450 aa21.43■■□□□ 1.02
PHGDH-211ENST00000641213 NPHP4O75161 1426 aaPredicted RBP21.42■■□□□ 1.02
PHGDH-211ENST00000641213 RGPD2P0DJD1 1756 aa21.42■■□□□ 1.02
PHGDH-211ENST00000641213 GNAT3A8MTJ3 354 aa21.41■■□□□ 1.02
PHGDH-211ENST00000641213 SLC4A2P04920 1241 aa21.41■■□□□ 1.02
PHGDH-211ENST00000641213 LTV1Q96GA3 475 aaPredicted RBP21.41■■□□□ 1.02
PHGDH-211ENST00000641213 FAM208AQ9UK61 1670 aaKnown RBP21.41■■□□□ 1.02
PHGDH-211ENST00000641213 ESCO1Q5FWF5 840 aa21.41■■□□□ 1.02
PHGDH-211ENST00000641213 PHRF1Q9P1Y6 1649 aaKnown RBP21.4■■□□□ 1.02
PHGDH-211ENST00000641213 MFAP1P55081 439 aaKnown RBP21.4■■□□□ 1.02
PHGDH-211ENST00000641213 PSME1Q06323 249 aa21.39■■□□□ 1.01
PHGDH-211ENST00000641213 NFKBIBQ15653 356 aa21.39■■□□□ 1.01
PHGDH-211ENST00000641213 MSH6P52701 1360 aa21.39■■□□□ 1.01
PHGDH-211ENST00000641213 MAP3K5Q99683 1374 aa21.39■■□□□ 1.01
PHGDH-211ENST00000641213 BMP2KLQ5H9B9 411 aa21.38■■□□□ 1.01
PHGDH-211ENST00000641213 IP6K1Q92551 441 aa21.38■■□□□ 1.01
PHGDH-211ENST00000641213 C22orf23Q9BZE7 217 aa21.38■■□□□ 1.01
PHGDH-211ENST00000641213 ATP10DQ9P241 1426 aa21.38■■□□□ 1.01
PHGDH-211ENST00000641213 DCTPP1Q9H773 170 aa21.36■■□□□ 1.01
PHGDH-211ENST00000641213 G2E3Q7L622 706 aa21.36■■□□□ 1.01
PHGDH-211ENST00000641213 USHBP1Q8N6Y0 703 aa21.36■■□□□ 1.01
PHGDH-211ENST00000641213 ANKRD44Q8N8A2 993 aa21.36■■□□□ 1.01
PHGDH-211ENST00000641213 IL17REQ8NFR9 667 aa21.36■■□□□ 1.01
PHGDH-211ENST00000641213 RPAP2Q8IXW5 612 aaPredicted RBP21.35■■□□□ 1.01
PHGDH-211ENST00000641213 KCNH5Q8NCM2 988 aa21.33■■□□□ 1.01
PHGDH-211ENST00000641213 MEIS3Q99687 375 aa21.33■■□□□ 1.01
PHGDH-211ENST00000641213 TBC1D2Q9BYX2 928 aa21.33■■□□□ 1.01
PHGDH-211ENST00000641213 N4BP2Q86UW6 1770 aaPredicted RBP21.33■■□□□ 1.01
PHGDH-211ENST00000641213 CEP85Q6P2H3 762 aa21.33■■□□□ 1
PHGDH-211ENST00000641213 TRPM3Q9HCF6 1732 aaPredicted RBP21.32■■□□□ 1
PHGDH-211ENST00000641213 TAF7Q15545 349 aaPredicted RBP21.32■■□□□ 1
PHGDH-211ENST00000641213 BABAM1Q9NWV8 329 aa21.32■■□□□ 1
PHGDH-211ENST00000641213 NBPF6Q5VWK0 638 aa21.32■■□□□ 1
PHGDH-211ENST00000641213 NBPF4Q96M43 638 aa21.32■■□□□ 1
PHGDH-211ENST00000641213 ORAI2Q96SN7 254 aa21.32■■□□□ 1
PHGDH-211ENST00000641213 STK31Q9BXU1 1019 aa21.32■■□□□ 1
PHGDH-211ENST00000641213 F6X3S4 739 aa21.31■■□□□ 1
PHGDH-211ENST00000641213 LMO7Q8WWI1 1683 aa21.3■■□□□ 1
PHGDH-211ENST00000641213 SLIT3O75094 1523 aa21.3■■□□□ 1
PHGDH-211ENST00000641213 CCT4P50991 539 aaKnown RBP21.3■■□□□ 1
PHGDH-211ENST00000641213 CCDC30Q5VVM6 783 aa21.3■■□□□ 1
PHGDH-211ENST00000641213 KDM3BQ7LBC6 1761 aa21.29■■□□□ 1
PHGDH-211ENST00000641213 SOS1Q07889 1333 aaPredicted RBP21.29■■□□□ 1
PHGDH-211ENST00000641213 SLC4A10Q6U841 1118 aa21.29■■□□□ 1
PHGDH-211ENST00000641213 PLEKHM2Q8IWE5 1019 aa21.28■■□□□ 1
PHGDH-211ENST00000641213 MED1Q15648 1581 aaPredicted RBP21.28■■□□□ 1
PHGDH-211ENST00000641213 ZBTB7CA1YPR0 619 aa21.28■■□□□ 1
PHGDH-211ENST00000641213 RBM25P49756 843 aaKnown RBP21.28■■□□□ 1
PHGDH-211ENST00000641213 KIF1AQ12756 1690 aa21.28■■□□□ 1
PHGDH-211ENST00000641213 CEMIPQ8WUJ3 1361 aa21.28■■□□□ 1
PHGDH-211ENST00000641213 XPCQ01831 940 aaPredicted RBP21.27■■□□□ 1
PHGDH-211ENST00000641213 SLKQ9H2G2 1235 aaPredicted RBP21.27■■□□□ 1
PHGDH-211ENST00000641213 ANTXR1Q9H6X2 564 aa21.27■■□□□ 1
PHGDH-211ENST00000641213 FRAT2O75474 233 aaPredicted RBP21.27■□□□□ 0.99
PHGDH-211ENST00000641213 FLIIQ13045 1269 aa21.27■□□□□ 0.99
PHGDH-211ENST00000641213 RGPD5Q99666 1765 aa21.27■□□□□ 0.99
PHGDH-211ENST00000641213 GCP02774 474 aa21.25■□□□□ 0.99
PHGDH-211ENST00000641213 TBC1D9Q6ZT07 1266 aa21.25■□□□□ 0.99
PHGDH-211ENST00000641213 NECTIN2Q92692 538 aa21.25■□□□□ 0.99
PHGDH-211ENST00000641213 ARHGEF25Q86VW2 580 aa21.25■□□□□ 0.99
PHGDH-211ENST00000641213 PROSER2Q86WR7 435 aaPredicted RBP21.25■□□□□ 0.99
PHGDH-211ENST00000641213 GSPT1P15170 499 aaKnown RBP21.24■□□□□ 0.99
PHGDH-211ENST00000641213 FKBP5Q13451 457 aaPredicted RBP21.24■□□□□ 0.99
PHGDH-211ENST00000641213 C16orf71Q8IYS4 520 aaPredicted RBP21.24■□□□□ 0.99
PHGDH-211ENST00000641213 LRRC59Q96AG4 307 aaKnown RBP21.24■□□□□ 0.99
PHGDH-211ENST00000641213 CAMTA1Q9Y6Y1 1673 aa21.23■□□□□ 0.99
PHGDH-211ENST00000641213 LGR6Q9HBX8 967 aa21.23■□□□□ 0.99
PHGDH-211ENST00000641213 NCAPD2Q15021 1401 aa21.23■□□□□ 0.99
PHGDH-211ENST00000641213 C1orf167Q5SNV9 1468 aa21.22■□□□□ 0.99
PHGDH-211ENST00000641213 HMMRO75330 724 aa21.22■□□□□ 0.99
PHGDH-211ENST00000641213 CDC45O75419 566 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms