RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 LMO7Q8WWI1 1683 aa23.56■■□□□ 1.36
PHGDH-209ENST00000641074 CRBNQ96SW2 442 aa23.55■■□□□ 1.36
PHGDH-209ENST00000641074 BCL2L13Q9BXK5 485 aa23.55■■□□□ 1.36
PHGDH-209ENST00000641074 AHDC1Q5TGY3 1603 aaPredicted RBP23.55■■□□□ 1.36
PHGDH-209ENST00000641074 B4GALNT3Q6L9W6 998 aa23.55■■□□□ 1.36
PHGDH-209ENST00000641074 PRDM11Q9NQV5 511 aa23.55■■□□□ 1.36
PHGDH-209ENST00000641074 MAP3K5Q99683 1374 aa23.55■■□□□ 1.36
PHGDH-209ENST00000641074 CHL1O00533 1208 aa23.54■■□□□ 1.36
PHGDH-209ENST00000641074 NLRP2Q9NX02 1062 aa23.54■■□□□ 1.36
PHGDH-209ENST00000641074 CSB-PGBD3P0DP91 1061 aa23.52■■□□□ 1.36
PHGDH-209ENST00000641074 PLEKHO1Q53GL0 409 aaPredicted RBP23.52■■□□□ 1.36
PHGDH-209ENST00000641074 SSH1Q8WYL5 1049 aa23.51■■□□□ 1.35
PHGDH-209ENST00000641074 FRAT1Q92837 279 aaPredicted RBP23.51■■□□□ 1.35
PHGDH-209ENST00000641074 CANXP27824 592 aaKnown RBP23.5■■□□□ 1.35
PHGDH-209ENST00000641074 AMOTQ4VCS5 1084 aa23.5■■□□□ 1.35
PHGDH-209ENST00000641074 TSPYL6Q8N831 410 aa23.5■■□□□ 1.35
PHGDH-209ENST00000641074 IL17REQ8NFR9 667 aa23.5■■□□□ 1.35
PHGDH-209ENST00000641074 LRRC37A3O60309 1634 aa23.5■■□□□ 1.35
PHGDH-209ENST00000641074 VAMP4O75379 141 aa23.5■■□□□ 1.35
PHGDH-209ENST00000641074 SMC4Q9NTJ3 1288 aa23.5■■□□□ 1.35
PHGDH-209ENST00000641074 FAM208AQ9UK61 1670 aaKnown RBP23.49■■□□□ 1.35
PHGDH-209ENST00000641074 C8orf58Q8NAV2 365 aa23.49■■□□□ 1.35
PHGDH-209ENST00000641074 PDE3AQ14432 1141 aa23.48■■□□□ 1.35
PHGDH-209ENST00000641074 ZNF428Q96B54 188 aa23.48■■□□□ 1.35
PHGDH-209ENST00000641074 ELL2O00472 640 aaPredicted RBP23.47■■□□□ 1.35
PHGDH-209ENST00000641074 TOM1O60784 492 aa23.47■■□□□ 1.35
PHGDH-209ENST00000641074 ZNF530Q6P9A1 599 aaPredicted RBP23.47■■□□□ 1.35
PHGDH-209ENST00000641074 CCDC136Q96JN2 1154 aa23.47■■□□□ 1.35
PHGDH-209ENST00000641074 TWISTNBQ3B726 338 aaPredicted RBP23.47■■□□□ 1.35
PHGDH-209ENST00000641074 ALDH1L2Q3SY69 923 aa23.47■■□□□ 1.35
PHGDH-209ENST00000641074 AEBP2Q6ZN18 517 aaPredicted RBP23.47■■□□□ 1.35
PHGDH-209ENST00000641074 MIS18AQ9NYP9 233 aa23.47■■□□□ 1.35
PHGDH-209ENST00000641074 AKAP4Q5JQC9 854 aa23.46■■□□□ 1.35
PHGDH-209ENST00000641074 RAPGEF4Q8WZA2 1011 aa23.46■■□□□ 1.35
PHGDH-209ENST00000641074 COL5A2P05997 1499 aaPredicted RBP23.45■■□□□ 1.34
PHGDH-209ENST00000641074 TSPYL4Q9UJ04 414 aa23.45■■□□□ 1.34
PHGDH-209ENST00000641074 CEMIPQ8WUJ3 1361 aa23.44■■□□□ 1.34
PHGDH-209ENST00000641074 WDR17Q8IZU2 1322 aa23.44■■□□□ 1.34
PHGDH-209ENST00000641074 PIP4K2BP78356 416 aa23.44■■□□□ 1.34
PHGDH-209ENST00000641074 PANK1Q8TE04 598 aa23.44■■□□□ 1.34
PHGDH-209ENST00000641074 COL22A1Q8NFW1 1626 aaPredicted RBP23.43■■□□□ 1.34
PHGDH-209ENST00000641074 KRT24Q2M2I5 525 aa23.43■■□□□ 1.34
PHGDH-209ENST00000641074 LGR6Q9HBX8 967 aa23.43■■□□□ 1.34
PHGDH-209ENST00000641074 TNNQ9UQP3 1299 aa23.43■■□□□ 1.34
PHGDH-209ENST00000641074 MEGF6O75095 1541 aa23.43■■□□□ 1.34
PHGDH-209ENST00000641074 PHLPP1O60346 1717 aa23.42■■□□□ 1.34
PHGDH-209ENST00000641074 TATP17735 454 aaPredicted RBP23.42■■□□□ 1.34
PHGDH-209ENST00000641074 C1orf141Q5JVX7 400 aa23.42■■□□□ 1.34
PHGDH-209ENST00000641074 ZKSCAN2Q63HK3 967 aa23.42■■□□□ 1.34
PHGDH-209ENST00000641074 TAF7Q15545 349 aaPredicted RBP23.42■■□□□ 1.34
PHGDH-209ENST00000641074 COL16A1Q07092 1604 aaPredicted RBP23.41■■□□□ 1.34
PHGDH-209ENST00000641074 NOB1Q9ULX3 412 aaKnown RBP23.41■■□□□ 1.34
PHGDH-209ENST00000641074 RLBP1P12271 317 aa23.4■■□□□ 1.34
PHGDH-209ENST00000641074 BRPF1P55201 1214 aaPredicted RBP23.4■■□□□ 1.34
PHGDH-209ENST00000641074 MPRIPQ6WCQ1 1025 aa23.4■■□□□ 1.34
PHGDH-209ENST00000641074 TOM1L2Q6ZVM7 507 aa23.4■■□□□ 1.34
PHGDH-209ENST00000641074 BABAM1Q9NWV8 329 aa23.4■■□□□ 1.34
PHGDH-209ENST00000641074 KIF16BQ96L93 1317 aa23.39■■□□□ 1.33
PHGDH-209ENST00000641074 UBAP1LF5GYI3 381 aa23.39■■□□□ 1.33
PHGDH-209ENST00000641074 MRPL50Q8N5N7 158 aaKnown RBP23.39■■□□□ 1.33
PHGDH-209ENST00000641074 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.39■■□□□ 1.33
PHGDH-209ENST00000641074 COG6Q9Y2V7 657 aa23.39■■□□□ 1.33
PHGDH-209ENST00000641074 PELP1Q8IZL8 1130 aaKnown RBP23.38■■□□□ 1.33
PHGDH-209ENST00000641074 CLUAP1Q96AJ1 413 aa23.38■■□□□ 1.33
PHGDH-209ENST00000641074 SPG7Q9UQ90 795 aa23.38■■□□□ 1.33
PHGDH-209ENST00000641074 PLEKHG2Q9H7P9 1386 aa23.38■■□□□ 1.33
PHGDH-209ENST00000641074 RNMTO43148 476 aaKnown RBP23.37■■□□□ 1.33
PHGDH-209ENST00000641074 TRIM27P14373 513 aa23.37■■□□□ 1.33
PHGDH-209ENST00000641074 ATF7IPQ6VMQ6 1270 aa23.37■■□□□ 1.33
PHGDH-209ENST00000641074 STRN4Q9NRL3 753 aa23.37■■□□□ 1.33
PHGDH-209ENST00000641074 TCERG1O14776 1098 aaKnown RBP23.37■■□□□ 1.33
PHGDH-209ENST00000641074 EVA1CP58658 441 aa23.37■■□□□ 1.33
PHGDH-209ENST00000641074 IPO8O15397 1037 aaKnown RBP23.36■■□□□ 1.33
PHGDH-209ENST00000641074 LARP1Q6PKG0 1096 aaKnown RBP23.36■■□□□ 1.33
PHGDH-209ENST00000641074 DZIP1LQ8IYY4 767 aaKnown RBP23.36■■□□□ 1.33
PHGDH-209ENST00000641074 CARD10Q9BWT7 1032 aa23.36■■□□□ 1.33
PHGDH-209ENST00000641074 OVOS2A0A0G2JMS6 1433 aa23.35■■□□□ 1.33
PHGDH-209ENST00000641074 MS4A1P11836 297 aa23.35■■□□□ 1.33
PHGDH-209ENST00000641074 BTG4Q9NY30 223 aa23.35■■□□□ 1.33
PHGDH-209ENST00000641074 TEFQ10587 303 aa23.34■■□□□ 1.33
PHGDH-209ENST00000641074 FTSJ3Q8IY81 847 aaKnown RBP23.34■■□□□ 1.33
PHGDH-209ENST00000641074 COL14A1Q05707 1796 aaKnown RBP23.34■■□□□ 1.33
PHGDH-209ENST00000641074 VIRMAQ69YN4 1812 aaKnown RBP23.34■■□□□ 1.33
PHGDH-209ENST00000641074 PKD1L3Q7Z443 1732 aa23.33■■□□□ 1.33
PHGDH-209ENST00000641074 PHKG2P15735 406 aa23.33■■□□□ 1.33
PHGDH-209ENST00000641074 ADAMTS7Q9UKP4 1686 aa23.33■■□□□ 1.32
PHGDH-209ENST00000641074 IFNL2Q8IZJ0 200 aa23.32■■□□□ 1.32
PHGDH-209ENST00000641074 ARHGAP45Q92619 1136 aa23.31■■□□□ 1.32
PHGDH-209ENST00000641074 PARP4Q9UKK3 1724 aaKnown RBP23.3■■□□□ 1.32
PHGDH-209ENST00000641074 CYP27B1O15528 508 aa23.3■■□□□ 1.32
PHGDH-209ENST00000641074 MVPQ14764 893 aaKnown RBP23.3■■□□□ 1.32
PHGDH-209ENST00000641074 BTBD11A6QL63 1104 aa23.29■■□□□ 1.32
PHGDH-209ENST00000641074 KDM6AO15550 1401 aaPredicted RBP23.29■■□□□ 1.32
PHGDH-209ENST00000641074 KDM3BQ7LBC6 1761 aa23.29■■□□□ 1.32
PHGDH-209ENST00000641074 IL2RBP14784 551 aa23.28■■□□□ 1.32
PHGDH-209ENST00000641074 SCN11AQ9UI33 1791 aa23.27■■□□□ 1.32
PHGDH-209ENST00000641074 KCNQ3O43525 872 aa23.27■■□□□ 1.32
PHGDH-209ENST00000641074 ADAMTS2O95450 1211 aa23.27■■□□□ 1.32
PHGDH-209ENST00000641074 EIF4A1P60842 406 aaKnown RBP23.27■■□□□ 1.32
PHGDH-209ENST00000641074 TMEM57Q8N5G2 664 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms