RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
AP3S1-209ENST00000640413 CELA2BP08218 269 aaPredicted RBP9.4□□□□□ -0.9
AP3S1-209ENST00000640413 RNF144AP50876 292 aaPredicted RBP9.4□□□□□ -0.9
AP3S1-209ENST00000640413 DNMT3AQ9Y6K1 912 aaPredicted RBP9.4□□□□□ -0.9
AP3S1-209ENST00000640413 GPR25O00155 361 aa9.39□□□□□ -0.91
AP3S1-209ENST00000640413 GIGYF1O75420 1035 aaPredicted RBP9.39□□□□□ -0.91
AP3S1-209ENST00000640413 MAP3K10Q02779 954 aa9.39□□□□□ -0.91
AP3S1-209ENST00000640413 SEPT12Q8IYM1 358 aa9.39□□□□□ -0.91
AP3S1-209ENST00000640413 ZNF837Q96EG3 531 aaPredicted RBP9.39□□□□□ -0.91
AP3S1-209ENST00000640413 SCARF2Q96GP6 870 aaPredicted RBP9.39□□□□□ -0.91
AP3S1-209ENST00000640413 ATP5J2-PTCD1G3V325 749 aa9.38□□□□□ -0.91
AP3S1-209ENST00000640413 MEN1O00255 615 aa9.38□□□□□ -0.91
AP3S1-209ENST00000640413 KANK3Q6NY19 840 aa9.38□□□□□ -0.91
AP3S1-209ENST00000640413 PCDHB9Q9Y5E1 797 aa9.38□□□□□ -0.91
AP3S1-209ENST00000640413 DBN1Q16643 649 aa9.37□□□□□ -0.91
AP3S1-209ENST00000640413 RIPOR1Q6ZS17 1223 aa9.37□□□□□ -0.91
AP3S1-209ENST00000640413 TRIM22Q8IYM9 498 aa9.36□□□□□ -0.91
AP3S1-209ENST00000640413 A0A1W2PRU2 124 aa9.35□□□□□ -0.91
AP3S1-209ENST00000640413 ZBBXA8MT70 800 aa9.35□□□□□ -0.91
AP3S1-209ENST00000640413 MBIPQ9NS73 344 aa9.35□□□□□ -0.91
AP3S1-209ENST00000640413 FBXO45P0C2W1 286 aa9.34□□□□□ -0.91
AP3S1-209ENST00000640413 POU4F2Q12837 409 aa9.34□□□□□ -0.91
AP3S1-209ENST00000640413 IGF1RP08069 1367 aa9.34□□□□□ -0.91
AP3S1-209ENST00000640413 GTPBP3Q969Y2 492 aaKnown RBP9.33□□□□□ -0.92
AP3S1-209ENST00000640413 GAS2L1Q99501 681 aaPredicted RBP9.33□□□□□ -0.92
AP3S1-209ENST00000640413 CNTNAP5Q8WYK1 1306 aa9.32□□□□□ -0.92
AP3S1-209ENST00000640413 IGHA1P01876 353 aa9.32□□□□□ -0.92
AP3S1-209ENST00000640413 GPC1P35052 558 aa9.32□□□□□ -0.92
AP3S1-209ENST00000640413 FOXR1Q6PIV2 292 aa9.32□□□□□ -0.92
AP3S1-209ENST00000640413 GMCL1Q96IK5 515 aa9.32□□□□□ -0.92
AP3S1-209ENST00000640413 ENAMQ9NRM1 1142 aa9.32□□□□□ -0.92
AP3S1-209ENST00000640413 ERVK-9P63128 1117 aa9.31□□□□□ -0.92
AP3S1-209ENST00000640413 TMEM259Q4ZIN3 620 aa9.31□□□□□ -0.92
AP3S1-209ENST00000640413 SLC27A3Q5K4L6 730 aa9.31□□□□□ -0.92
AP3S1-209ENST00000640413 CC2D2BQ6DHV5 1058 aa9.31□□□□□ -0.92
AP3S1-209ENST00000640413 TRIM52Q96A61 297 aa9.31□□□□□ -0.92
AP3S1-209ENST00000640413 GJD4Q96KN9 370 aaPredicted RBP9.31□□□□□ -0.92
AP3S1-209ENST00000640413 PCMTD1Q96MG8 357 aaPredicted RBP9.31□□□□□ -0.92
AP3S1-209ENST00000640413 DYRK1BQ9Y463 629 aa9.31□□□□□ -0.92
AP3S1-209ENST00000640413 SCTRP47872 440 aa9.3□□□□□ -0.92
AP3S1-209ENST00000640413 FOXK2Q01167 660 aa9.3□□□□□ -0.92
AP3S1-209ENST00000640413 NLRP3Q96P20 1036 aa9.3□□□□□ -0.92
AP3S1-209ENST00000640413 BCRP11274 1271 aa9.29□□□□□ -0.92
AP3S1-209ENST00000640413 ACDQ96AP0 544 aa9.29□□□□□ -0.92
AP3S1-209ENST00000640413 GRIP2Q9C0E4 1043 aa9.29□□□□□ -0.92
AP3S1-209ENST00000640413 H7C1W4 665 aa9.28□□□□□ -0.92
AP3S1-209ENST00000640413 NBPF10Q6P3W6 841 aaKnown RBP9.28□□□□□ -0.92
AP3S1-209ENST00000640413 NBPF15Q8N660 670 aa9.28□□□□□ -0.92
AP3S1-209ENST00000640413 NEDD1Q8NHV4 660 aa9.28□□□□□ -0.92
AP3S1-209ENST00000640413 PHF20L1A8MW92 1017 aa9.26□□□□□ -0.93
AP3S1-209ENST00000640413 CLN3Q13286 438 aa9.26□□□□□ -0.93
AP3S1-209ENST00000640413 PLA2G4EQ3MJ16 856 aa9.26□□□□□ -0.93
AP3S1-209ENST00000640413 RNF20Q5VTR2 975 aa9.26□□□□□ -0.93
AP3S1-209ENST00000640413 CYP2U1Q7Z449 544 aa9.26□□□□□ -0.93
AP3S1-209ENST00000640413 DCAF5Q96JK2 942 aa9.26□□□□□ -0.93
AP3S1-209ENST00000640413 TRERF1Q96PN7 1200 aa9.26□□□□□ -0.93
AP3S1-209ENST00000640413 ARHGEF10LQ9HCE6 1279 aa9.26□□□□□ -0.93
AP3S1-209ENST00000640413 GOPCQ9HD26 462 aa9.26□□□□□ -0.93
AP3S1-209ENST00000640413 PCDHB11Q9Y5F2 797 aa9.26□□□□□ -0.93
AP3S1-209ENST00000640413 MX2P20592 715 aa9.25□□□□□ -0.93
AP3S1-209ENST00000640413 CCDC125Q86Z20 511 aa9.25□□□□□ -0.93
AP3S1-209ENST00000640413 BEND7Q8N7W2 519 aaPredicted RBP9.25□□□□□ -0.93
AP3S1-209ENST00000640413 OSBPL3Q9H4L5 887 aa9.25□□□□□ -0.93
AP3S1-209ENST00000640413 TIMMDC1Q9NPL8 285 aa9.25□□□□□ -0.93
AP3S1-209ENST00000640413 RAB6BQ9NRW1 208 aa9.25□□□□□ -0.93
AP3S1-209ENST00000640413 SPATA31C2B4DYI2 1134 aa9.24□□□□□ -0.93
AP3S1-209ENST00000640413 ITGB2P05107 769 aa9.24□□□□□ -0.93
AP3S1-209ENST00000640413 NR1H3Q13133 447 aa9.24□□□□□ -0.93
AP3S1-209ENST00000640413 NUCKS1Q9H1E3 243 aaKnown RBP9.24□□□□□ -0.93
AP3S1-209ENST00000640413 WASLO00401 505 aaPredicted RBP9.23□□□□□ -0.93
AP3S1-209ENST00000640413 TRAK2O60296 914 aa9.23□□□□□ -0.93
AP3S1-209ENST00000640413 PODNQ7Z5L7 613 aa9.23□□□□□ -0.93
AP3S1-209ENST00000640413 IL27Q8NEV9 243 aa9.23□□□□□ -0.93
AP3S1-209ENST00000640413 MSTNO14793 375 aa9.22□□□□□ -0.93
AP3S1-209ENST00000640413 F11P03951 625 aa9.22□□□□□ -0.93
AP3S1-209ENST00000640413 TAS1R3Q7RTX0 852 aa9.22□□□□□ -0.93
AP3S1-209ENST00000640413 ESF1Q9H501 851 aaKnown RBP9.22□□□□□ -0.93
AP3S1-209ENST00000640413 THBS1P07996 1170 aa9.21□□□□□ -0.94
AP3S1-209ENST00000640413 WDR44Q5JSH3 913 aa9.21□□□□□ -0.94
AP3S1-209ENST00000640413 SPOCK3Q9BQ16 436 aa9.21□□□□□ -0.94
AP3S1-209ENST00000640413 GPAMQ9HCL2 828 aa9.21□□□□□ -0.94
AP3S1-209ENST00000640413 PHKA2P46019 1235 aa9.2□□□□□ -0.94
AP3S1-209ENST00000640413 MCCD1P59942 119 aaPredicted RBP9.2□□□□□ -0.94
AP3S1-209ENST00000640413 CNKSR1Q969H4 720 aa9.2□□□□□ -0.94
AP3S1-209ENST00000640413 NSFL1CQ9UNZ2 370 aaKnown RBP9.2□□□□□ -0.94
AP3S1-209ENST00000640413 OIP5O43482 229 aa9.19□□□□□ -0.94
AP3S1-209ENST00000640413 GPR37L1O60883 481 aa9.19□□□□□ -0.94
AP3S1-209ENST00000640413 IL2RAP01589 272 aa9.19□□□□□ -0.94
AP3S1-209ENST00000640413 CENPCQ03188 943 aa9.19□□□□□ -0.94
AP3S1-209ENST00000640413 SNRPNP63162 240 aaKnown RBP9.18□□□□□ -0.94
AP3S1-209ENST00000640413 ESYT1Q9BSJ8 1104 aa9.18□□□□□ -0.94
AP3S1-209ENST00000640413 CDCA7Q9BWT1 371 aaPredicted RBP9.18□□□□□ -0.94
AP3S1-209ENST00000640413 OXCT2Q9BYC2 517 aaPredicted RBP9.18□□□□□ -0.94
AP3S1-209ENST00000640413 ZNF330Q9Y3S2 320 aaPredicted RBP9.18□□□□□ -0.94
AP3S1-209ENST00000640413 NEUROD2Q15784 382 aa9.17□□□□□ -0.94
AP3S1-209ENST00000640413 LRRC4BQ9NT99 713 aa9.17□□□□□ -0.94
AP3S1-209ENST00000640413 SHISA8B8ZZ34 492 aa9.16□□□□□ -0.94
AP3S1-209ENST00000640413 ADAM23O75077 832 aa9.16□□□□□ -0.94
AP3S1-209ENST00000640413 GNRH1P01148 92 aa9.16□□□□□ -0.94
AP3S1-209ENST00000640413 PROCP04070 461 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms