RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 BACH2Q9BYV9 841 aa17.39■□□□□ 0.37
HNRNPU-226ENST00000640218 PDCL3Q9H2J4 239 aa17.39■□□□□ 0.37
HNRNPU-226ENST00000640218 ATAD2Q6PL18 1390 aa17.39■□□□□ 0.37
HNRNPU-226ENST00000640218 UBAP1LF5GYI3 381 aa17.39■□□□□ 0.37
HNRNPU-226ENST00000640218 ZSCAN29Q8IWY8 852 aaPredicted RBP17.39■□□□□ 0.37
HNRNPU-226ENST00000640218 DEF6Q9H4E7 631 aa17.39■□□□□ 0.37
HNRNPU-226ENST00000640218 NOL7Q9UMY1 257 aaKnown RBP17.39■□□□□ 0.37
HNRNPU-226ENST00000640218 SYNJ1O43426 1573 aa17.39■□□□□ 0.37
HNRNPU-226ENST00000640218 GNAT3A8MTJ3 354 aa17.38■□□□□ 0.37
HNRNPU-226ENST00000640218 UBAC1Q9BSL1 405 aa17.38■□□□□ 0.37
HNRNPU-226ENST00000640218 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
HNRNPU-226ENST00000640218 LRP2BPQ9P2M1 347 aa17.38■□□□□ 0.37
HNRNPU-226ENST00000640218 NFE2L2Q16236 605 aa17.38■□□□□ 0.37
HNRNPU-226ENST00000640218 PIBF1Q8WXW3 757 aa17.38■□□□□ 0.37
HNRNPU-226ENST00000640218 NSD3Q9BZ95 1437 aa17.38■□□□□ 0.37
HNRNPU-226ENST00000640218 DCTN1Q14203 1278 aa17.37■□□□□ 0.37
HNRNPU-226ENST00000640218 NUTM1Q86Y26 1132 aa17.37■□□□□ 0.37
HNRNPU-226ENST00000640218 RPGRIP1LQ68CZ1 1315 aa17.37■□□□□ 0.37
HNRNPU-226ENST00000640218 TMPOP42166 694 aaKnown RBP17.37■□□□□ 0.37
HNRNPU-226ENST00000640218 NUDT16Q96DE0 195 aaKnown RBP17.37■□□□□ 0.37
HNRNPU-226ENST00000640218 SPATA32Q96LK8 384 aa17.37■□□□□ 0.37
HNRNPU-226ENST00000640218 CTNNA3Q9UI47 895 aa17.37■□□□□ 0.37
HNRNPU-226ENST00000640218 DAPK1P53355 1430 aa17.37■□□□□ 0.37
HNRNPU-226ENST00000640218 CDKL5O76039 1030 aa17.37■□□□□ 0.37
HNRNPU-226ENST00000640218 CCDC184Q52MB2 194 aa17.37■□□□□ 0.37
HNRNPU-226ENST00000640218 TMEM57Q8N5G2 664 aa17.37■□□□□ 0.37
HNRNPU-226ENST00000640218 NESP48681 1621 aa17.36■□□□□ 0.37
HNRNPU-226ENST00000640218 SUPT6HQ7KZ85 1726 aaKnown RBP17.36■□□□□ 0.37
HNRNPU-226ENST00000640218 IDH1O75874 414 aaKnown RBP17.36■□□□□ 0.37
HNRNPU-226ENST00000640218 SSBP05455 408 aaKnown RBP eCLIP17.36■□□□□ 0.37
HNRNPU-226ENST00000640218 BRPF3Q9ULD4 1205 aa17.35■□□□□ 0.37
HNRNPU-226ENST00000640218 MRC2Q9UBG0 1479 aa17.35■□□□□ 0.37
HNRNPU-226ENST00000640218 H0YHG0 523 aa17.35■□□□□ 0.37
HNRNPU-226ENST00000640218 AXDND1Q5T1B0 1012 aaPredicted RBP17.35■□□□□ 0.37
HNRNPU-226ENST00000640218 IGHMBP2P38935 993 aaKnown RBP17.35■□□□□ 0.37
HNRNPU-226ENST00000640218 FAM177A1Q8N128 213 aaPredicted RBP17.35■□□□□ 0.37
HNRNPU-226ENST00000640218 ANKRD30BQ9BXX2 1392 aa17.35■□□□□ 0.37
HNRNPU-226ENST00000640218 EXOC6BQ9Y2D4 811 aa17.35■□□□□ 0.37
HNRNPU-226ENST00000640218 MAP7D2Q96T17 732 aa17.34■□□□□ 0.37
HNRNPU-226ENST00000640218 THUMPD2Q9BTF0 503 aaKnown RBP17.34■□□□□ 0.37
HNRNPU-226ENST00000640218 MCM10Q7L590 875 aa17.34■□□□□ 0.37
HNRNPU-226ENST00000640218 ZSCAN31Q96LW9 406 aaPredicted RBP17.34■□□□□ 0.37
HNRNPU-226ENST00000640218 RPAP2Q8IXW5 612 aaPredicted RBP17.34■□□□□ 0.37
HNRNPU-226ENST00000640218 CLEC11AQ9Y240 323 aa17.34■□□□□ 0.37
HNRNPU-226ENST00000640218 CFAP45Q9UL16 551 aa17.34■□□□□ 0.37
HNRNPU-226ENST00000640218 KRT32Q14532 448 aa17.33■□□□□ 0.37
HNRNPU-226ENST00000640218 LUC7LQ9NQ29 371 aaKnown RBP17.33■□□□□ 0.37
HNRNPU-226ENST00000640218 CASTP20810 708 aaKnown RBP17.33■□□□□ 0.37
HNRNPU-226ENST00000640218 PLCD3Q8N3E9 789 aa17.33■□□□□ 0.37
HNRNPU-226ENST00000640218 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.36
HNRNPU-226ENST00000640218 DUSP27Q5VZP5 1158 aa17.33■□□□□ 0.36
HNRNPU-226ENST00000640218 CCDC181Q5TID7 509 aa17.33■□□□□ 0.36
HNRNPU-226ENST00000640218 MTERF4Q7Z6M4 381 aaKnown RBP17.33■□□□□ 0.36
HNRNPU-226ENST00000640218 ABCF2Q9UG63 623 aa17.33■□□□□ 0.36
HNRNPU-226ENST00000640218 IFT140Q96RY7 1462 aa17.33■□□□□ 0.36
HNRNPU-226ENST00000640218 STARD3NLO95772 234 aa17.33■□□□□ 0.36
HNRNPU-226ENST00000640218 NEFHP12036 1026 aa17.33■□□□□ 0.36
HNRNPU-226ENST00000640218 CCDC61Q9Y6R9 512 aa17.33■□□□□ 0.36
HNRNPU-226ENST00000640218 ERLIN2O94905 339 aa17.32■□□□□ 0.36
HNRNPU-226ENST00000640218 AIDAQ96BJ3 306 aa17.32■□□□□ 0.36
HNRNPU-226ENST00000640218 DDX11Q96FC9 970 aa17.32■□□□□ 0.36
HNRNPU-226ENST00000640218 SLFN5Q08AF3 891 aa17.32■□□□□ 0.36
HNRNPU-226ENST00000640218 METTL24Q5JXM2 366 aa17.32■□□□□ 0.36
HNRNPU-226ENST00000640218 IMMTQ16891 758 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-226ENST00000640218 WAPLQ7Z5K2 1190 aa17.32■□□□□ 0.36
HNRNPU-226ENST00000640218 PTCD1O75127 700 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-226ENST00000640218 USP5P45974 858 aa17.32■□□□□ 0.36
HNRNPU-226ENST00000640218 CWC15Q9P013 229 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-226ENST00000640218 CBFA2T2O43439 604 aa17.31■□□□□ 0.36
HNRNPU-226ENST00000640218 TMEM87AQ8NBN3 555 aa17.31■□□□□ 0.36
HNRNPU-226ENST00000640218 ZNF76P36508 570 aa17.31■□□□□ 0.36
HNRNPU-226ENST00000640218 BMP2KQ9NSY1 1161 aaPredicted RBP17.31■□□□□ 0.36
HNRNPU-226ENST00000640218 RBM10P98175 930 aaKnown RBP17.31■□□□□ 0.36
HNRNPU-226ENST00000640218 GRPEL1Q9HAV7 217 aa17.31■□□□□ 0.36
HNRNPU-226ENST00000640218 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
HNRNPU-226ENST00000640218 HMGN5P82970 282 aaKnown RBP17.31■□□□□ 0.36
HNRNPU-226ENST00000640218 NUP62CLQ9H1M0 184 aa17.31■□□□□ 0.36
HNRNPU-226ENST00000640218 TIAM1Q13009 1591 aa17.31■□□□□ 0.36
HNRNPU-226ENST00000640218 SEPT11Q9NVA2 429 aaKnown RBP17.3■□□□□ 0.36
HNRNPU-226ENST00000640218 SMARCA5O60264 1052 aaPredicted RBP17.3■□□□□ 0.36
HNRNPU-226ENST00000640218 KCNH5Q8NCM2 988 aa17.3■□□□□ 0.36
HNRNPU-226ENST00000640218 WDR97A6NE52 1622 aa17.3■□□□□ 0.36
HNRNPU-226ENST00000640218 DHX8Q14562 1220 aaKnown RBP17.3■□□□□ 0.36
HNRNPU-226ENST00000640218 CEP57L1Q8IYX8 460 aa17.3■□□□□ 0.36
HNRNPU-226ENST00000640218 CCDC191Q8NCU4 936 aa17.3■□□□□ 0.36
HNRNPU-226ENST00000640218 MPHOSPH10O00566 681 aaKnown RBP17.29■□□□□ 0.36
HNRNPU-226ENST00000640218 WDR78Q5VTH9 848 aa17.29■□□□□ 0.36
HNRNPU-226ENST00000640218 KIF1BPQ96EK5 621 aa17.29■□□□□ 0.36
HNRNPU-226ENST00000640218 POGZQ7Z3K3 1410 aa17.29■□□□□ 0.36
HNRNPU-226ENST00000640218 WDHD1O75717 1129 aaPredicted RBP17.29■□□□□ 0.36
HNRNPU-226ENST00000640218 WASF1Q92558 559 aa17.29■□□□□ 0.36
HNRNPU-226ENST00000640218 USHBP1Q8N6Y0 703 aa17.28■□□□□ 0.36
HNRNPU-226ENST00000640218 MYD88Q99836 296 aa17.28■□□□□ 0.36
HNRNPU-226ENST00000640218 TSPYL1Q9H0U9 437 aa17.28■□□□□ 0.36
HNRNPU-226ENST00000640218 MATR3P43243 847 aaKnown RBP eCLIP17.28■□□□□ 0.36
HNRNPU-226ENST00000640218 GOLGA6L10A6NI86 522 aa17.28■□□□□ 0.36
HNRNPU-226ENST00000640218 UPF3BQ9BZI7 483 aaKnown RBP17.28■□□□□ 0.36
HNRNPU-226ENST00000640218 TXLNBQ8N3L3 684 aa17.27■□□□□ 0.36
HNRNPU-226ENST00000640218 CCDC112Q8NEF3 446 aa17.27■□□□□ 0.36
HNRNPU-226ENST00000640218 CDK13Q14004 1512 aaKnown RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms