RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 FKBP4Q02790 459 aaKnown RBP eCLIP21.76■■□□□ 1.07
SCARB2-213ENST00000638680 NACAP1Q9BZK3 213 aa21.76■■□□□ 1.07
SCARB2-213ENST00000638680 TNPO1Q92973 898 aaKnown RBP21.75■■□□□ 1.07
SCARB2-213ENST00000638680 ANKRD30BQ9BXX2 1392 aa21.75■■□□□ 1.07
SCARB2-213ENST00000638680 FCHSD2O94868 740 aa21.75■■□□□ 1.07
SCARB2-213ENST00000638680 KRT32Q14532 448 aa21.75■■□□□ 1.07
SCARB2-213ENST00000638680 CCDC183Q5T5S1 534 aa21.75■■□□□ 1.07
SCARB2-213ENST00000638680 CDKL5O76039 1030 aa21.75■■□□□ 1.07
SCARB2-213ENST00000638680 RARSP54136 660 aaKnown RBP21.75■■□□□ 1.07
SCARB2-213ENST00000638680 RRS1Q15050 365 aaKnown RBP21.74■■□□□ 1.07
SCARB2-213ENST00000638680 ESCO1Q5FWF5 840 aa21.74■■□□□ 1.07
SCARB2-213ENST00000638680 NSD3Q9BZ95 1437 aa21.74■■□□□ 1.07
SCARB2-213ENST00000638680 NOL7Q9UMY1 257 aaKnown RBP21.74■■□□□ 1.07
SCARB2-213ENST00000638680 DAPK1P53355 1430 aa21.74■■□□□ 1.07
SCARB2-213ENST00000638680 NFE2L2Q16236 605 aa21.74■■□□□ 1.07
SCARB2-213ENST00000638680 PTPN14Q15678 1187 aa21.73■■□□□ 1.07
SCARB2-213ENST00000638680 CFAP100Q494V2 611 aa21.73■■□□□ 1.07
SCARB2-213ENST00000638680 ZNF530Q6P9A1 599 aaPredicted RBP21.73■■□□□ 1.07
SCARB2-213ENST00000638680 TXLNBQ8N3L3 684 aa21.73■■□□□ 1.07
SCARB2-213ENST00000638680 NKTRP30414 1462 aaKnown RBP21.73■■□□□ 1.07
SCARB2-213ENST00000638680 EFCAB5A4FU69 1503 aa21.73■■□□□ 1.07
SCARB2-213ENST00000638680 MX1P20591 662 aa21.72■■□□□ 1.07
SCARB2-213ENST00000638680 ZNF692Q9BU19 519 aaPredicted RBP21.72■■□□□ 1.07
SCARB2-213ENST00000638680 IQCEQ6IPM2 695 aa21.72■■□□□ 1.07
SCARB2-213ENST00000638680 TMCO3Q6UWJ1 677 aa21.72■■□□□ 1.07
SCARB2-213ENST00000638680 ZHX3Q9H4I2 956 aa21.72■■□□□ 1.07
SCARB2-213ENST00000638680 C11orf95C9JLR9 678 aaPredicted RBP21.72■■□□□ 1.07
SCARB2-213ENST00000638680 EPB41L2O43491 1005 aaKnown RBP21.72■■□□□ 1.07
SCARB2-213ENST00000638680 PRKCSHP14314 528 aaPredicted RBP21.72■■□□□ 1.07
SCARB2-213ENST00000638680 GNL3LQ9NVN8 582 aaKnown RBP21.72■■□□□ 1.07
SCARB2-213ENST00000638680 LRRFIP2Q9Y608 721 aaKnown RBP21.72■■□□□ 1.07
SCARB2-213ENST00000638680 PDIA4P13667 645 aaKnown RBP21.71■■□□□ 1.07
SCARB2-213ENST00000638680 NEFHP12036 1026 aa21.71■■□□□ 1.07
SCARB2-213ENST00000638680 ZSCAN25Q6NSZ9 544 aa21.71■■□□□ 1.07
SCARB2-213ENST00000638680 TATP17735 454 aaPredicted RBP21.71■■□□□ 1.07
SCARB2-213ENST00000638680 FAM69CQ0P6D2 419 aa21.71■■□□□ 1.07
SCARB2-213ENST00000638680 PRPF40BQ6NWY9 871 aaKnown RBP21.71■■□□□ 1.07
SCARB2-213ENST00000638680 CTNNA3Q9UI47 895 aa21.7■■□□□ 1.07
SCARB2-213ENST00000638680 DHX37Q8IY37 1157 aaKnown RBP21.7■■□□□ 1.06
SCARB2-213ENST00000638680 SSH1Q8WYL5 1049 aa21.7■■□□□ 1.06
SCARB2-213ENST00000638680 ARHGAP29Q52LW3 1261 aa21.7■■□□□ 1.06
SCARB2-213ENST00000638680 SYNJ2O15056 1496 aa21.7■■□□□ 1.06
SCARB2-213ENST00000638680 THUMPD2Q9BTF0 503 aaKnown RBP21.7■■□□□ 1.06
SCARB2-213ENST00000638680 SFPQP23246 707 aaKnown RBP eCLIP21.69■■□□□ 1.06
SCARB2-213ENST00000638680 CCDC57Q2TAC2 916 aa21.69■■□□□ 1.06
SCARB2-213ENST00000638680 MAPK8IP2Q13387 824 aaPredicted RBP21.69■■□□□ 1.06
SCARB2-213ENST00000638680 CABP4P57796 275 aa21.69■■□□□ 1.06
SCARB2-213ENST00000638680 PLEKHH2Q8IVE3 1493 aa21.69■■□□□ 1.06
SCARB2-213ENST00000638680 KIF2AO00139 706 aaPredicted RBP21.68■■□□□ 1.06
SCARB2-213ENST00000638680 RTEL1-TNFRSF6BF6WH68 1400 aa21.68■■□□□ 1.06
SCARB2-213ENST00000638680 PRG4Q92954 1404 aaPredicted RBP21.68■■□□□ 1.06
SCARB2-213ENST00000638680 TAF3Q5VWG9 929 aa21.68■■□□□ 1.06
SCARB2-213ENST00000638680 KIAA1328Q86T90 577 aa21.68■■□□□ 1.06
SCARB2-213ENST00000638680 TAX1BP1Q86VP1 789 aa21.68■■□□□ 1.06
SCARB2-213ENST00000638680 GOLGA6L7A0A1B0GV03 622 aa21.68■■□□□ 1.06
SCARB2-213ENST00000638680 USP25Q9UHP3 1055 aa21.68■■□□□ 1.06
SCARB2-213ENST00000638680 MIS18AQ9NYP9 233 aa21.68■■□□□ 1.06
SCARB2-213ENST00000638680 ENOX2Q16206 610 aaKnown RBP21.67■■□□□ 1.06
SCARB2-213ENST00000638680 BTBD11A6QL63 1104 aa21.67■■□□□ 1.06
SCARB2-213ENST00000638680 CNKSR2Q8WXI2 1034 aa21.67■■□□□ 1.06
SCARB2-213ENST00000638680 CLIP2Q9UDT6 1046 aa21.67■■□□□ 1.06
SCARB2-213ENST00000638680 KIF18AQ8NI77 898 aa21.66■■□□□ 1.06
SCARB2-213ENST00000638680 ATP2B2Q01814 1243 aa21.66■■□□□ 1.06
SCARB2-213ENST00000638680 CCDC148Q8NFR7 591 aa21.66■■□□□ 1.06
SCARB2-213ENST00000638680 ANO10Q9NW15 660 aa21.66■■□□□ 1.06
SCARB2-213ENST00000638680 SUPT6HQ7KZ85 1726 aaKnown RBP21.66■■□□□ 1.06
SCARB2-213ENST00000638680 EIF5P55010 431 aaKnown RBP21.66■■□□□ 1.06
SCARB2-213ENST00000638680 SEPT7Q16181 437 aaKnown RBP21.66■■□□□ 1.06
SCARB2-213ENST00000638680 SOGA3Q5TF21 947 aa21.66■■□□□ 1.06
SCARB2-213ENST00000638680 ALDH1L2Q3SY69 923 aa21.65■■□□□ 1.06
SCARB2-213ENST00000638680 KIF1BPQ96EK5 621 aa21.65■■□□□ 1.06
SCARB2-213ENST00000638680 UBAC1Q9BSL1 405 aa21.65■■□□□ 1.06
SCARB2-213ENST00000638680 LRPPRCP42704 1394 aaKnown RBP21.65■■□□□ 1.06
SCARB2-213ENST00000638680 DDX54Q8TDD1 881 aaKnown RBP21.65■■□□□ 1.06
SCARB2-213ENST00000638680 TDO2P48775 406 aa21.65■■□□□ 1.06
SCARB2-213ENST00000638680 PDCL3Q9H2J4 239 aa21.65■■□□□ 1.06
SCARB2-213ENST00000638680 ZSCAN12O43309 604 aa21.65■■□□□ 1.06
SCARB2-213ENST00000638680 USP8P40818 1118 aa21.65■■□□□ 1.06
SCARB2-213ENST00000638680 TMEM132AQ24JP5 1023 aa21.65■■□□□ 1.06
SCARB2-213ENST00000638680 SCAND2PQ9GZW5 306 aaPredicted RBP21.65■■□□□ 1.06
SCARB2-213ENST00000638680 NAIPQ13075 1403 aa21.64■■□□□ 1.06
SCARB2-213ENST00000638680 PLEKHH1Q9ULM0 1364 aa21.64■■□□□ 1.06
SCARB2-213ENST00000638680 CASQ1P31415 396 aa21.64■■□□□ 1.05
SCARB2-213ENST00000638680 WASF1Q92558 559 aa21.64■■□□□ 1.05
SCARB2-213ENST00000638680 IMMTQ16891 758 aaKnown RBP21.64■■□□□ 1.05
SCARB2-213ENST00000638680 OSCARQ8IYS5 282 aa21.64■■□□□ 1.05
SCARB2-213ENST00000638680 ATAD2Q6PL18 1390 aa21.64■■□□□ 1.05
SCARB2-213ENST00000638680 HECW1Q76N89 1606 aa21.64■■□□□ 1.05
SCARB2-213ENST00000638680 DUSP27Q5VZP5 1158 aa21.63■■□□□ 1.05
SCARB2-213ENST00000638680 CGNQ9P2M7 1197 aaKnown RBP21.63■■□□□ 1.05
SCARB2-213ENST00000638680 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
SCARB2-213ENST00000638680 RAB11FIP3O75154 756 aa21.63■■□□□ 1.05
SCARB2-213ENST00000638680 URI1O94763 535 aaPredicted RBP21.63■■□□□ 1.05
SCARB2-213ENST00000638680 TNNT1P13805 278 aa21.63■■□□□ 1.05
SCARB2-213ENST00000638680 PRXQ9BXM0 1461 aa21.63■■□□□ 1.05
SCARB2-213ENST00000638680 ANKRD62A6NC57 917 aa21.63■■□□□ 1.05
SCARB2-213ENST00000638680 GLRX3O76003 335 aaKnown RBP21.63■■□□□ 1.05
SCARB2-213ENST00000638680 MCM10Q7L590 875 aa21.63■■□□□ 1.05
SCARB2-213ENST00000638680 SEPT11Q9NVA2 429 aaKnown RBP21.63■■□□□ 1.05
SCARB2-213ENST00000638680 CEP126Q9P2H0 1117 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms