RNA–Protein interactions for RNA: ENST00000637937.1

CTSD-214, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-214ENST00000637937 NUP188Q5SRE5 1749 aa23.26■■□□□ 1.31
CTSD-214ENST00000637937 KIF7Q2M1P5 1343 aa23.26■■□□□ 1.31
CTSD-214ENST00000637937 RGPD2P0DJD1 1756 aa23.25■■□□□ 1.31
CTSD-214ENST00000637937 MORC1Q86VD1 984 aa23.25■■□□□ 1.31
CTSD-214ENST00000637937 PRIM1P49642 420 aaKnown RBP23.23■■□□□ 1.31
CTSD-214ENST00000637937 ANO8Q9HCE9 1232 aaPredicted RBP23.23■■□□□ 1.31
CTSD-214ENST00000637937 NSD2O96028 1365 aa23.23■■□□□ 1.31
CTSD-214ENST00000637937 NHSQ6T4R5 1651 aa23.22■■□□□ 1.31
CTSD-214ENST00000637937 RGPD3A6NKT7 1758 aaPredicted RBP23.22■■□□□ 1.31
CTSD-214ENST00000637937 RGPD4Q7Z3J3 1758 aa23.22■■□□□ 1.31
CTSD-214ENST00000637937 STK32BQ9NY57 414 aa23.21■■□□□ 1.31
CTSD-214ENST00000637937 EYA1Q99502 592 aa23.2■■□□□ 1.3
CTSD-214ENST00000637937 LRP5O75197 1615 aa23.19■■□□□ 1.3
CTSD-214ENST00000637937 KAT6BQ8WYB5 2073 aa23.18■■□□□ 1.3
CTSD-214ENST00000637937 PCDH11XQ9BZA7 1347 aa23.18■■□□□ 1.3
CTSD-214ENST00000637937 PCDH11YQ9BZA8 1340 aa23.18■■□□□ 1.3
CTSD-214ENST00000637937 EIF4A2Q14240 407 aaKnown RBP23.18■■□□□ 1.3
CTSD-214ENST00000637937 MAP2P11137 1827 aaKnown RBP23.17■■□□□ 1.3
CTSD-214ENST00000637937 SLC15A2Q16348 729 aa23.16■■□□□ 1.3
CTSD-214ENST00000637937 SPG7Q9UQ90 795 aa23.15■■□□□ 1.3
CTSD-214ENST00000637937 ANKRD26Q9UPS8 1709 aa23.15■■□□□ 1.3
CTSD-214ENST00000637937 CYP27B1O15528 508 aa23.14■■□□□ 1.29
CTSD-214ENST00000637937 AMER1Q5JTC6 1135 aaPredicted RBP23.14■■□□□ 1.29
CTSD-214ENST00000637937 SPON1Q9HCB6 807 aa23.14■■□□□ 1.29
CTSD-214ENST00000637937 BTAF1O14981 1849 aa23.13■■□□□ 1.29
CTSD-214ENST00000637937 NCAPD2Q15021 1401 aa23.12■■□□□ 1.29
CTSD-214ENST00000637937 SLC27A3Q5K4L6 730 aa23.12■■□□□ 1.29
CTSD-214ENST00000637937 SHANK3Q9BYB0 1731 aa23.12■■□□□ 1.29
CTSD-214ENST00000637937 PDGFDQ9GZP0 370 aaPredicted RBP23.12■■□□□ 1.29
CTSD-214ENST00000637937 LRRC4BQ9NT99 713 aa23.12■■□□□ 1.29
CTSD-214ENST00000637937 CC2D1BQ5T0F9 858 aaKnown RBP23.1■■□□□ 1.29
CTSD-214ENST00000637937 MPRIPQ6WCQ1 1025 aa23.1■■□□□ 1.29
CTSD-214ENST00000637937 PPP1R1BQ9UD71 204 aaPredicted RBP23.1■■□□□ 1.29
CTSD-214ENST00000637937 DOT1LQ8TEK3 1739 aa23.09■■□□□ 1.29
CTSD-214ENST00000637937 PER1O15534 1290 aaPredicted RBP23.09■■□□□ 1.29
CTSD-214ENST00000637937 ZBTB7AO95365 584 aa23.09■■□□□ 1.29
CTSD-214ENST00000637937 KCNQ4P56696 695 aa23.09■■□□□ 1.29
CTSD-214ENST00000637937 CNGB1Q14028 1251 aaPredicted RBP23.09■■□□□ 1.29
CTSD-214ENST00000637937 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.09■■□□□ 1.29
CTSD-214ENST00000637937 IGSF1Q8N6C5 1336 aa23.08■■□□□ 1.28
CTSD-214ENST00000637937 CCNL1Q9UK58 526 aaPredicted RBP23.07■■□□□ 1.28
CTSD-214ENST00000637937 ZNF827Q17R98 1081 aa23.06■■□□□ 1.28
CTSD-214ENST00000637937 IFNL2Q8IZJ0 200 aa23.06■■□□□ 1.28
CTSD-214ENST00000637937 ATF5Q9Y2D1 282 aaPredicted RBP23.06■■□□□ 1.28
CTSD-214ENST00000637937 NKX1-1Q15270 411 aaPredicted RBP23.05■■□□□ 1.28
CTSD-214ENST00000637937 PHKG2P15735 406 aa23.04■■□□□ 1.28
CTSD-214ENST00000637937 MTHFSP49914 203 aa23.03■■□□□ 1.28
CTSD-214ENST00000637937 AKT1S1Q96B36 256 aa23.03■■□□□ 1.28
CTSD-214ENST00000637937 PLEKHO1Q53GL0 409 aaPredicted RBP23.02■■□□□ 1.28
CTSD-214ENST00000637937 TFCP2L1Q9NZI6 479 aa23.02■■□□□ 1.28
CTSD-214ENST00000637937 PKD1L3Q7Z443 1732 aa23.02■■□□□ 1.28
CTSD-214ENST00000637937 IL13P35225 146 aa23.01■■□□□ 1.27
CTSD-214ENST00000637937 SULT6B1Q6IMI4 303 aa23.01■■□□□ 1.27
CTSD-214ENST00000637937 AEBP1Q8IUX7 1158 aa23.01■■□□□ 1.27
CTSD-214ENST00000637937 PIGBQ92521 554 aa23.01■■□□□ 1.27
CTSD-214ENST00000637937 MTFR1LQ9H019 292 aa23.01■■□□□ 1.27
CTSD-214ENST00000637937 SMARCC1Q92922 1105 aaPredicted RBP23■■□□□ 1.27
CTSD-214ENST00000637937 TMOD3Q9NYL9 352 aa23■■□□□ 1.27
CTSD-214ENST00000637937 PAPPAQ13219 1627 aa23■■□□□ 1.27
CTSD-214ENST00000637937 PALLDQ8WX93 1383 aa23■■□□□ 1.27
CTSD-214ENST00000637937 CASZ1Q86V15 1759 aa22.99■■□□□ 1.27
CTSD-214ENST00000637937 AMOTQ4VCS5 1084 aa22.99■■□□□ 1.27
CTSD-214ENST00000637937 PLEKHG2Q9H7P9 1386 aa22.98■■□□□ 1.27
CTSD-214ENST00000637937 PTGER2P43116 358 aa22.97■■□□□ 1.27
CTSD-214ENST00000637937 ZNF530Q6P9A1 599 aaPredicted RBP22.97■■□□□ 1.27
CTSD-214ENST00000637937 HSP90AB1P08238 724 aaKnown RBP22.96■■□□□ 1.27
CTSD-214ENST00000637937 HMGB2P26583 209 aaKnown RBP22.96■■□□□ 1.27
CTSD-214ENST00000637937 NPC1L1Q9UHC9 1359 aa22.96■■□□□ 1.27
CTSD-214ENST00000637937 PNPLA7Q6ZV29 1317 aa22.95■■□□□ 1.26
CTSD-214ENST00000637937 LY75O60449 1722 aa22.94■■□□□ 1.26
CTSD-214ENST00000637937 MSH5O43196 834 aa22.94■■□□□ 1.26
CTSD-214ENST00000637937 DIAPH1O60610 1272 aaKnown RBP22.94■■□□□ 1.26
CTSD-214ENST00000637937 C1orf141Q5JVX7 400 aa22.94■■□□□ 1.26
CTSD-214ENST00000637937 DCAF5Q96JK2 942 aa22.94■■□□□ 1.26
CTSD-214ENST00000637937 TOGARAM1Q9Y4F4 1720 aa22.94■■□□□ 1.26
CTSD-214ENST00000637937 SLC16A10Q8TF71 515 aa22.93■■□□□ 1.26
CTSD-214ENST00000637937 ASAP1Q9ULH1 1129 aa22.93■■□□□ 1.26
CTSD-214ENST00000637937 HMOX1P09601 288 aa22.92■■□□□ 1.26
CTSD-214ENST00000637937 KDRP35968 1356 aa22.91■■□□□ 1.26
CTSD-214ENST00000637937 ERVV-2B6SEH9 535 aa22.91■■□□□ 1.26
CTSD-214ENST00000637937 LOC102724428A0A0B4J2F2 783 aa22.9■■□□□ 1.26
CTSD-214ENST00000637937 SIK1P57059 783 aa22.9■■□□□ 1.26
CTSD-214ENST00000637937 CABP4P57796 275 aa22.9■■□□□ 1.26
CTSD-214ENST00000637937 SGIP1Q9BQI5 828 aa22.9■■□□□ 1.26
CTSD-214ENST00000637937 DCAF8L1A6NGE4 600 aa22.89■■□□□ 1.25
CTSD-214ENST00000637937 ARXQ96QS3 562 aa22.89■■□□□ 1.25
CTSD-214ENST00000637937 ATG3Q9NT62 314 aa22.89■■□□□ 1.25
CTSD-214ENST00000637937 ITGB4P16144 1822 aa22.89■■□□□ 1.25
CTSD-214ENST00000637937 POLD1P28340 1107 aa22.88■■□□□ 1.25
CTSD-214ENST00000637937 COL23A1Q86Y22 540 aaPredicted RBP22.88■■□□□ 1.25
CTSD-214ENST00000637937 AK7Q96M32 723 aa22.88■■□□□ 1.25
CTSD-214ENST00000637937 U2SURPO15042 1029 aaKnown RBP22.87■■□□□ 1.25
CTSD-214ENST00000637937 ATP6V1AP38606 617 aa22.87■■□□□ 1.25
CTSD-214ENST00000637937 FHDC1Q9C0D6 1143 aaPredicted RBP22.87■■□□□ 1.25
CTSD-214ENST00000637937 KDM6AO15550 1401 aaPredicted RBP22.85■■□□□ 1.25
CTSD-214ENST00000637937 FLAD1Q8NFF5 587 aa22.85■■□□□ 1.25
CTSD-214ENST00000637937 RBM42Q9BTD8 480 aaKnown RBP22.85■■□□□ 1.25
CTSD-214ENST00000637937 AKAP4Q5JQC9 854 aa22.84■■□□□ 1.25
CTSD-214ENST00000637937 CFAP53Q96M91 514 aa22.84■■□□□ 1.25
CTSD-214ENST00000637937 SYT17Q9BSW7 474 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms