RNA–Protein interactions for RNA: ENST00000636257.1

SPTAN1-230, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-230ENST00000636257 TAF1LQ8IZX4 1826 aa18.31■□□□□ 0.52
SPTAN1-230ENST00000636257 SRPK2P78362 688 aaKnown RBP18.31■□□□□ 0.52
SPTAN1-230ENST00000636257 CCNL1Q9UK58 526 aaPredicted RBP18.31■□□□□ 0.52
SPTAN1-230ENST00000636257 NSD2O96028 1365 aa18.3■□□□□ 0.52
SPTAN1-230ENST00000636257 ANKRD36BQ8N2N9 1353 aa18.3■□□□□ 0.52
SPTAN1-230ENST00000636257 SOX12O15370 315 aa18.3■□□□□ 0.52
SPTAN1-230ENST00000636257 C16orf71Q8IYS4 520 aaPredicted RBP18.3■□□□□ 0.52
SPTAN1-230ENST00000636257 DCAF11Q8TEB1 546 aa18.3■□□□□ 0.52
SPTAN1-230ENST00000636257 NLRP2Q9NX02 1062 aa18.3■□□□□ 0.52
SPTAN1-230ENST00000636257 STAC3Q96MF2 364 aa18.29■□□□□ 0.52
SPTAN1-230ENST00000636257 LTN1O94822 1766 aa18.29■□□□□ 0.52
SPTAN1-230ENST00000636257 FLAD1Q8NFF5 587 aa18.28■□□□□ 0.52
SPTAN1-230ENST00000636257 CABP1Q9NZU7 370 aa18.28■□□□□ 0.52
SPTAN1-230ENST00000636257 PKD1L3Q7Z443 1732 aa18.27■□□□□ 0.52
SPTAN1-230ENST00000636257 KIAA1551Q9HCM1 1747 aa18.27■□□□□ 0.52
SPTAN1-230ENST00000636257 SYTL4Q96C24 671 aaPredicted RBP18.27■□□□□ 0.52
SPTAN1-230ENST00000636257 CABP2Q9NPB3 220 aa18.27■□□□□ 0.52
SPTAN1-230ENST00000636257 KIF13BQ9NQT8 1826 aa18.27■□□□□ 0.52
SPTAN1-230ENST00000636257 C10orf71Q711Q0 1435 aa18.26■□□□□ 0.51
SPTAN1-230ENST00000636257 TNRC6CQ9HCJ0 1690 aaKnown RBP18.26■□□□□ 0.51
SPTAN1-230ENST00000636257 PRIM1P49642 420 aaKnown RBP18.26■□□□□ 0.51
SPTAN1-230ENST00000636257 KIAA1210Q9ULL0 1709 aa18.26■□□□□ 0.51
SPTAN1-230ENST00000636257 TOGARAM1Q9Y4F4 1720 aa18.26■□□□□ 0.51
SPTAN1-230ENST00000636257 DDX54Q8TDD1 881 aaKnown RBP18.25■□□□□ 0.51
SPTAN1-230ENST00000636257 N4BP2Q86UW6 1770 aaPredicted RBP18.24■□□□□ 0.51
SPTAN1-230ENST00000636257 UBR3Q6ZT12 1888 aa18.24■□□□□ 0.51
SPTAN1-230ENST00000636257 TTC21BQ7Z4L5 1316 aa18.23■□□□□ 0.51
SPTAN1-230ENST00000636257 FAM208AQ9UK61 1670 aaKnown RBP18.23■□□□□ 0.51
SPTAN1-230ENST00000636257 PLEKHG2Q9H7P9 1386 aa18.23■□□□□ 0.51
SPTAN1-230ENST00000636257 BRCA1P38398 1863 aaKnown RBP18.22■□□□□ 0.51
SPTAN1-230ENST00000636257 TTC21AQ8NDW8 1320 aa18.22■□□□□ 0.51
SPTAN1-230ENST00000636257 PXDNLA1KZ92 1463 aa18.21■□□□□ 0.51
SPTAN1-230ENST00000636257 C4BP0C0L5 1744 aa18.21■□□□□ 0.51
SPTAN1-230ENST00000636257 USP47Q96K76 1375 aa18.21■□□□□ 0.51
SPTAN1-230ENST00000636257 KCPQ6ZWJ8 1503 aa18.19■□□□□ 0.5
SPTAN1-230ENST00000636257 HMGB2P26583 209 aaKnown RBP18.19■□□□□ 0.5
SPTAN1-230ENST00000636257 SMC1BQ8NDV3 1235 aa18.19■□□□□ 0.5
SPTAN1-230ENST00000636257 ANKRD24Q8TF21 1146 aa18.19■□□□□ 0.5
SPTAN1-230ENST00000636257 ARFGEF1Q9Y6D6 1849 aa18.19■□□□□ 0.5
SPTAN1-230ENST00000636257 KDM2BQ8NHM5 1336 aa18.18■□□□□ 0.5
SPTAN1-230ENST00000636257 ZNF692Q9BU19 519 aaPredicted RBP18.17■□□□□ 0.5
SPTAN1-230ENST00000636257 CENPJQ9HC77 1338 aaPredicted RBP18.17■□□□□ 0.5
SPTAN1-230ENST00000636257 ARHGAP27Q6ZUM4 889 aa18.16■□□□□ 0.5
SPTAN1-230ENST00000636257 BCS1LQ9Y276 419 aa18.16■□□□□ 0.5
SPTAN1-230ENST00000636257 MON2Q7Z3U7 1717 aa18.15■□□□□ 0.5
SPTAN1-230ENST00000636257 FAM161AQ3B820 660 aa18.15■□□□□ 0.5
SPTAN1-230ENST00000636257 C9orf131Q5VYM1 1079 aa18.15■□□□□ 0.5
SPTAN1-230ENST00000636257 NSD3Q9BZ95 1437 aa18.15■□□□□ 0.5
SPTAN1-230ENST00000636257 AMIGO3Q86WK7 504 aa18.14■□□□□ 0.49
SPTAN1-230ENST00000636257 RRAGCQ9HB90 399 aa18.14■□□□□ 0.49
SPTAN1-230ENST00000636257 SBF1O95248 1867 aa18.13■□□□□ 0.49
SPTAN1-230ENST00000636257 TGFB2P61812 414 aa18.12■□□□□ 0.49
SPTAN1-230ENST00000636257 USP31Q70CQ4 1352 aa18.12■□□□□ 0.49
SPTAN1-230ENST00000636257 AK7Q96M32 723 aa18.11■□□□□ 0.49
SPTAN1-230ENST00000636257 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.1■□□□□ 0.49
SPTAN1-230ENST00000636257 PRDM10Q9NQV6 1147 aa18.1■□□□□ 0.49
SPTAN1-230ENST00000636257 RGPD2P0DJD1 1756 aa18.09■□□□□ 0.49
SPTAN1-230ENST00000636257 PALLDQ8WX93 1383 aa18.09■□□□□ 0.49
SPTAN1-230ENST00000636257 A0A0G2JLW4 131 aa18.09■□□□□ 0.49
SPTAN1-230ENST00000636257 PHF14O94880 888 aa18.09■□□□□ 0.49
SPTAN1-230ENST00000636257 ZCRB1Q8TBF4 217 aaKnown RBP18.09■□□□□ 0.49
SPTAN1-230ENST00000636257 KTN1Q86UP2 1357 aaKnown RBP18.08■□□□□ 0.49
SPTAN1-230ENST00000636257 SSFA2P28290 1259 aa18.08■□□□□ 0.48
SPTAN1-230ENST00000636257 FCHSD2O94868 740 aa18.07■□□□□ 0.48
SPTAN1-230ENST00000636257 NBPF1Q3BBV0 1214 aa18.07■□□□□ 0.48
SPTAN1-230ENST00000636257 SMIM5Q71RC9 77 aa18.07■□□□□ 0.48
SPTAN1-230ENST00000636257 MEGF6O75095 1541 aa18.07■□□□□ 0.48
SPTAN1-230ENST00000636257 ITGB4P16144 1822 aa18.07■□□□□ 0.48
SPTAN1-230ENST00000636257 FOXN1O15353 648 aa18.06■□□□□ 0.48
SPTAN1-230ENST00000636257 MMP10P09238 476 aa18.06■□□□□ 0.48
SPTAN1-230ENST00000636257 MAP2P11137 1827 aaKnown RBP18.05■□□□□ 0.48
SPTAN1-230ENST00000636257 EVC2Q86UK5 1308 aa18.05■□□□□ 0.48
SPTAN1-230ENST00000636257 RNF181Q9P0P0 153 aa18.04■□□□□ 0.48
SPTAN1-230ENST00000636257 DPEP1P16444 411 aa18.03■□□□□ 0.48
SPTAN1-230ENST00000636257 C4AP0C0L4 1744 aa18.02■□□□□ 0.48
SPTAN1-230ENST00000636257 IP6K1Q92551 441 aa18.02■□□□□ 0.48
SPTAN1-230ENST00000636257 MLLT1Q03111 559 aaPredicted RBP18.01■□□□□ 0.47
SPTAN1-230ENST00000636257 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.01■□□□□ 0.47
SPTAN1-230ENST00000636257 ABHD8Q96I13 439 aa18.01■□□□□ 0.47
SPTAN1-230ENST00000636257 NME9Q86XW9 330 aa18■□□□□ 0.47
SPTAN1-230ENST00000636257 LTV1Q96GA3 475 aaPredicted RBP18■□□□□ 0.47
SPTAN1-230ENST00000636257 DCAF5Q96JK2 942 aa18■□□□□ 0.47
SPTAN1-230ENST00000636257 ZC3H4Q9UPT8 1303 aaKnown RBP17.99■□□□□ 0.47
SPTAN1-230ENST00000636257 VEGFAP15692 232 aaPredicted RBP17.99■□□□□ 0.47
SPTAN1-230ENST00000636257 KCNA3P22001 575 aa17.99■□□□□ 0.47
SPTAN1-230ENST00000636257 CTCFP49711 727 aaPredicted RBP17.99■□□□□ 0.47
SPTAN1-230ENST00000636257 SMARCC1Q92922 1105 aaPredicted RBP17.99■□□□□ 0.47
SPTAN1-230ENST00000636257 CREBZFQ9NS37 354 aa17.98■□□□□ 0.47
SPTAN1-230ENST00000636257 SBNO2Q9Y2G9 1366 aa17.98■□□□□ 0.47
SPTAN1-230ENST00000636257 CGNL1Q0VF96 1302 aa17.98■□□□□ 0.47
SPTAN1-230ENST00000636257 TNRC18O15417 2968 aaPredicted RBP17.97■□□□□ 0.47
SPTAN1-230ENST00000636257 RGS19P49795 217 aa17.97■□□□□ 0.47
SPTAN1-230ENST00000636257 MPRIPQ6WCQ1 1025 aa17.97■□□□□ 0.47
SPTAN1-230ENST00000636257 CCDC87Q9NVE4 849 aa17.97■□□□□ 0.47
SPTAN1-230ENST00000636257 MKRN1Q9UHC7 482 aaKnown RBP17.97■□□□□ 0.47
SPTAN1-230ENST00000636257 TIAM2Q8IVF5 1701 aa17.97■□□□□ 0.47
SPTAN1-230ENST00000636257 VIRMAQ69YN4 1812 aaKnown RBP17.96■□□□□ 0.47
SPTAN1-230ENST00000636257 LINC00116Q8NCU8 138 aa17.96■□□□□ 0.47
SPTAN1-230ENST00000636257 PIM2Q9P1W9 311 aa17.96■□□□□ 0.47
SPTAN1-230ENST00000636257 KDM6AO15550 1401 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms