RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 PROM2Q8N271 834 aa25.03■■□□□ 1.6
CLN6-210ENST00000635747 MEGF6O75095 1541 aa25.02■■□□□ 1.6
CLN6-210ENST00000635747 NHSQ6T4R5 1651 aa25.02■■□□□ 1.6
CLN6-210ENST00000635747 TNNT2P45379 298 aaPredicted RBP25.02■■□□□ 1.6
CLN6-210ENST00000635747 KIF7Q2M1P5 1343 aa25.02■■□□□ 1.6
CLN6-210ENST00000635747 RGPD2P0DJD1 1756 aa25■■□□□ 1.59
CLN6-210ENST00000635747 MORC1Q86VD1 984 aa25■■□□□ 1.59
CLN6-210ENST00000635747 LRP5O75197 1615 aa25■■□□□ 1.59
CLN6-210ENST00000635747 PCDH11XQ9BZA7 1347 aa24.98■■□□□ 1.59
CLN6-210ENST00000635747 PCDH11YQ9BZA8 1340 aa24.98■■□□□ 1.59
CLN6-210ENST00000635747 ANKRD26Q9UPS8 1709 aa24.98■■□□□ 1.59
CLN6-210ENST00000635747 SYTL4Q96C24 671 aaPredicted RBP24.97■■□□□ 1.59
CLN6-210ENST00000635747 MAP2P11137 1827 aaKnown RBP24.97■■□□□ 1.59
CLN6-210ENST00000635747 PRIM1P49642 420 aaKnown RBP24.96■■□□□ 1.59
CLN6-210ENST00000635747 EYA1Q99502 592 aa24.96■■□□□ 1.59
CLN6-210ENST00000635747 STK32BQ9NY57 414 aa24.96■■□□□ 1.59
CLN6-210ENST00000635747 ANO8Q9HCE9 1232 aaPredicted RBP24.95■■□□□ 1.58
CLN6-210ENST00000635747 KAT6BQ8WYB5 2073 aa24.95■■□□□ 1.58
CLN6-210ENST00000635747 NCAPD2Q15021 1401 aa24.95■■□□□ 1.58
CLN6-210ENST00000635747 SPG7Q9UQ90 795 aa24.94■■□□□ 1.58
CLN6-210ENST00000635747 EIF4A2Q14240 407 aaKnown RBP24.93■■□□□ 1.58
CLN6-210ENST00000635747 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.93■■□□□ 1.58
CLN6-210ENST00000635747 SLC15A2Q16348 729 aa24.92■■□□□ 1.58
CLN6-210ENST00000635747 AMER1Q5JTC6 1135 aaPredicted RBP24.92■■□□□ 1.58
CLN6-210ENST00000635747 SLC27A3Q5K4L6 730 aa24.92■■□□□ 1.58
CLN6-210ENST00000635747 SPON1Q9HCB6 807 aa24.91■■□□□ 1.58
CLN6-210ENST00000635747 BTAF1O14981 1849 aa24.91■■□□□ 1.58
CLN6-210ENST00000635747 PLEKHG2Q9H7P9 1386 aa24.9■■□□□ 1.58
CLN6-210ENST00000635747 SHANK3Q9BYB0 1731 aa24.89■■□□□ 1.57
CLN6-210ENST00000635747 CYP27B1O15528 508 aa24.88■■□□□ 1.57
CLN6-210ENST00000635747 PER1O15534 1290 aaPredicted RBP24.88■■□□□ 1.57
CLN6-210ENST00000635747 HMGB2P26583 209 aaKnown RBP24.88■■□□□ 1.57
CLN6-210ENST00000635747 IGSF1Q8N6C5 1336 aa24.86■■□□□ 1.57
CLN6-210ENST00000635747 NKX1-1Q15270 411 aaPredicted RBP24.85■■□□□ 1.57
CLN6-210ENST00000635747 LRRC4BQ9NT99 713 aa24.85■■□□□ 1.57
CLN6-210ENST00000635747 DOT1LQ8TEK3 1739 aa24.83■■□□□ 1.57
CLN6-210ENST00000635747 IFNL2Q8IZJ0 200 aa24.83■■□□□ 1.57
CLN6-210ENST00000635747 PPP1R1BQ9UD71 204 aaPredicted RBP24.82■■□□□ 1.56
CLN6-210ENST00000635747 PKD1L3Q7Z443 1732 aa24.81■■□□□ 1.56
CLN6-210ENST00000635747 MPRIPQ6WCQ1 1025 aa24.81■■□□□ 1.56
CLN6-210ENST00000635747 NPC1L1Q9UHC9 1359 aa24.8■■□□□ 1.56
CLN6-210ENST00000635747 CCNL1Q9UK58 526 aaPredicted RBP24.8■■□□□ 1.56
CLN6-210ENST00000635747 PHKG2P15735 406 aa24.79■■□□□ 1.56
CLN6-210ENST00000635747 AMOTQ4VCS5 1084 aa24.79■■□□□ 1.56
CLN6-210ENST00000635747 PLEKHO1Q53GL0 409 aaPredicted RBP24.79■■□□□ 1.56
CLN6-210ENST00000635747 CC2D1BQ5T0F9 858 aaKnown RBP24.79■■□□□ 1.56
CLN6-210ENST00000635747 SMARCC1Q92922 1105 aaPredicted RBP24.79■■□□□ 1.56
CLN6-210ENST00000635747 MTHFSP49914 203 aa24.78■■□□□ 1.56
CLN6-210ENST00000635747 AKT1S1Q96B36 256 aa24.78■■□□□ 1.56
CLN6-210ENST00000635747 PDGFDQ9GZP0 370 aaPredicted RBP24.78■■□□□ 1.56
CLN6-210ENST00000635747 PAPPAQ13219 1627 aa24.78■■□□□ 1.56
CLN6-210ENST00000635747 ZBTB7AO95365 584 aa24.77■■□□□ 1.56
CLN6-210ENST00000635747 HSP90AB1P08238 724 aaKnown RBP24.77■■□□□ 1.56
CLN6-210ENST00000635747 IL13P35225 146 aa24.77■■□□□ 1.56
CLN6-210ENST00000635747 ZNF827Q17R98 1081 aa24.77■■□□□ 1.56
CLN6-210ENST00000635747 MTFR1LQ9H019 292 aa24.77■■□□□ 1.56
CLN6-210ENST00000635747 CASZ1Q86V15 1759 aa24.77■■□□□ 1.56
CLN6-210ENST00000635747 TFCP2L1Q9NZI6 479 aa24.75■■□□□ 1.55
CLN6-210ENST00000635747 KCNQ4P56696 695 aa24.74■■□□□ 1.55
CLN6-210ENST00000635747 SULT6B1Q6IMI4 303 aa24.74■■□□□ 1.55
CLN6-210ENST00000635747 SLC16A10Q8TF71 515 aa24.74■■□□□ 1.55
CLN6-210ENST00000635747 PIGBQ92521 554 aa24.74■■□□□ 1.55
CLN6-210ENST00000635747 TMOD3Q9NYL9 352 aa24.74■■□□□ 1.55
CLN6-210ENST00000635747 ATF5Q9Y2D1 282 aaPredicted RBP24.74■■□□□ 1.55
CLN6-210ENST00000635747 LY75O60449 1722 aa24.73■■□□□ 1.55
CLN6-210ENST00000635747 PALLDQ8WX93 1383 aa24.73■■□□□ 1.55
CLN6-210ENST00000635747 DCAF5Q96JK2 942 aa24.72■■□□□ 1.55
CLN6-210ENST00000635747 KDRP35968 1356 aa24.71■■□□□ 1.55
CLN6-210ENST00000635747 ERVV-2B6SEH9 535 aa24.71■■□□□ 1.55
CLN6-210ENST00000635747 ZNF530Q6P9A1 599 aaPredicted RBP24.71■■□□□ 1.55
CLN6-210ENST00000635747 DIAPH1O60610 1272 aaKnown RBP24.7■■□□□ 1.54
CLN6-210ENST00000635747 PTGER2P43116 358 aa24.7■■□□□ 1.54
CLN6-210ENST00000635747 C1orf141Q5JVX7 400 aa24.7■■□□□ 1.54
CLN6-210ENST00000635747 AEBP1Q8IUX7 1158 aa24.7■■□□□ 1.54
CLN6-210ENST00000635747 PNPLA7Q6ZV29 1317 aa24.67■■□□□ 1.54
CLN6-210ENST00000635747 TOGARAM1Q9Y4F4 1720 aa24.66■■□□□ 1.54
CLN6-210ENST00000635747 ITGB4P16144 1822 aa24.66■■□□□ 1.54
CLN6-210ENST00000635747 CNGB1Q14028 1251 aaPredicted RBP24.66■■□□□ 1.54
CLN6-210ENST00000635747 FLAD1Q8NFF5 587 aa24.65■■□□□ 1.54
CLN6-210ENST00000635747 SGIP1Q9BQI5 828 aa24.65■■□□□ 1.54
CLN6-210ENST00000635747 LOC102724428A0A0B4J2F2 783 aa24.64■■□□□ 1.54
CLN6-210ENST00000635747 DCAF8L1A6NGE4 600 aa24.64■■□□□ 1.54
CLN6-210ENST00000635747 SIK1P57059 783 aa24.64■■□□□ 1.54
CLN6-210ENST00000635747 ASAP1Q9ULH1 1129 aa24.64■■□□□ 1.54
CLN6-210ENST00000635747 QSER1Q2KHR3 1735 aa24.64■■□□□ 1.53
CLN6-210ENST00000635747 CABP4P57796 275 aa24.63■■□□□ 1.53
CLN6-210ENST00000635747 POLD1P28340 1107 aa24.62■■□□□ 1.53
CLN6-210ENST00000635747 ARXQ96QS3 562 aa24.62■■□□□ 1.53
CLN6-210ENST00000635747 ATG3Q9NT62 314 aa24.62■■□□□ 1.53
CLN6-210ENST00000635747 MSH5O43196 834 aa24.61■■□□□ 1.53
CLN6-210ENST00000635747 HMOX1P09601 288 aa24.61■■□□□ 1.53
CLN6-210ENST00000635747 AKAP4Q5JQC9 854 aa24.61■■□□□ 1.53
CLN6-210ENST00000635747 AK7Q96M32 723 aa24.61■■□□□ 1.53
CLN6-210ENST00000635747 CFAP53Q96M91 514 aa24.61■■□□□ 1.53
CLN6-210ENST00000635747 ATP6V1AP38606 617 aa24.59■■□□□ 1.53
CLN6-210ENST00000635747 COL23A1Q86Y22 540 aaPredicted RBP24.59■■□□□ 1.53
CLN6-210ENST00000635747 KDM6AO15550 1401 aaPredicted RBP24.58■■□□□ 1.53
CLN6-210ENST00000635747 C5P01031 1676 aa24.57■■□□□ 1.52
CLN6-210ENST00000635747 FHDC1Q9C0D6 1143 aaPredicted RBP24.57■■□□□ 1.52
CLN6-210ENST00000635747 U2SURPO15042 1029 aaKnown RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms