RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 SPDYE4A6NLX3 237 aa13.27□□□□□ -0.29
SRSF4-208ENST00000634348 SIL1Q9H173 461 aa13.27□□□□□ -0.29
SRSF4-208ENST00000634348 CABP2Q9NPB3 220 aa13.27□□□□□ -0.29
SRSF4-208ENST00000634348 DNAJC21Q5F1R6 531 aaKnown RBP13.26□□□□□ -0.29
SRSF4-208ENST00000634348 EPB41L2O43491 1005 aaKnown RBP13.26□□□□□ -0.29
SRSF4-208ENST00000634348 RAPGEF4Q8WZA2 1011 aa13.26□□□□□ -0.29
SRSF4-208ENST00000634348 C11orf95C9JLR9 678 aaPredicted RBP13.26□□□□□ -0.29
SRSF4-208ENST00000634348 WHAMMQ8TF30 809 aa13.26□□□□□ -0.29
SRSF4-208ENST00000634348 KRT18P05783 430 aaKnown RBP13.26□□□□□ -0.29
SRSF4-208ENST00000634348 ARHGAP29Q52LW3 1261 aa13.26□□□□□ -0.29
SRSF4-208ENST00000634348 RPUSD2Q8IZ73 545 aaKnown RBP13.26□□□□□ -0.29
SRSF4-208ENST00000634348 BRD2P25440 801 aaKnown RBP13.26□□□□□ -0.29
SRSF4-208ENST00000634348 STIM1Q13586 685 aa13.26□□□□□ -0.29
SRSF4-208ENST00000634348 TMEM132EQ6IEE7 984 aa13.26□□□□□ -0.29
SRSF4-208ENST00000634348 CDK5RAP3Q96JB5 506 aa13.26□□□□□ -0.29
SRSF4-208ENST00000634348 FLIIQ13045 1269 aa13.26□□□□□ -0.29
SRSF4-208ENST00000634348 PPP1R12BO60237 982 aaPredicted RBP13.25□□□□□ -0.29
SRSF4-208ENST00000634348 IMMTQ16891 758 aaKnown RBP13.25□□□□□ -0.29
SRSF4-208ENST00000634348 RUNDC1Q96C34 613 aa13.25□□□□□ -0.29
SRSF4-208ENST00000634348 PPFIBP2Q8ND30 876 aa13.25□□□□□ -0.29
SRSF4-208ENST00000634348 GOPCQ9HD26 462 aa13.25□□□□□ -0.29
SRSF4-208ENST00000634348 BANK1Q8NDB2 785 aa13.25□□□□□ -0.29
SRSF4-208ENST00000634348 TNMDQ9H2S6 317 aa13.25□□□□□ -0.29
SRSF4-208ENST00000634348 TACC1O75410 805 aa13.25□□□□□ -0.29
SRSF4-208ENST00000634348 ERC1Q8IUD2 1116 aa13.24□□□□□ -0.29
SRSF4-208ENST00000634348 SPECC1Q5M775 1068 aa13.24□□□□□ -0.29
SRSF4-208ENST00000634348 WWC2Q6AWC2 1192 aa13.24□□□□□ -0.29
SRSF4-208ENST00000634348 PDCP20941 246 aa13.24□□□□□ -0.29
SRSF4-208ENST00000634348 ZNF396Q96N95 335 aaPredicted RBP13.24□□□□□ -0.29
SRSF4-208ENST00000634348 FERP16591 822 aa13.24□□□□□ -0.29
SRSF4-208ENST00000634348 KRT222Q8N1A0 295 aa13.24□□□□□ -0.29
SRSF4-208ENST00000634348 RASSF4Q9H2L5 321 aa13.24□□□□□ -0.29
SRSF4-208ENST00000634348 PDE1CQ14123 709 aaPredicted RBP13.23□□□□□ -0.29
SRSF4-208ENST00000634348 LRCH2Q5VUJ6 765 aa13.23□□□□□ -0.29
SRSF4-208ENST00000634348 CNTROBQ8N137 903 aa13.23□□□□□ -0.29
SRSF4-208ENST00000634348 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
SRSF4-208ENST00000634348 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
SRSF4-208ENST00000634348 ZNF853P0CG23 659 aa13.23□□□□□ -0.29
SRSF4-208ENST00000634348 DESP17661 470 aa13.23□□□□□ -0.29
SRSF4-208ENST00000634348 ZSCAN12O43309 604 aa13.23□□□□□ -0.29
SRSF4-208ENST00000634348 CDC45O75419 566 aa13.23□□□□□ -0.29
SRSF4-208ENST00000634348 SCLT1Q96NL6 688 aa13.23□□□□□ -0.29
SRSF4-208ENST00000634348 RSPH14Q9UHP6 348 aa13.23□□□□□ -0.29
SRSF4-208ENST00000634348 ANAPC15P60006 121 aa13.23□□□□□ -0.29
SRSF4-208ENST00000634348 ANKS4BQ8N8V4 417 aa13.23□□□□□ -0.29
SRSF4-208ENST00000634348 HYPKQ9NX55 129 aa13.23□□□□□ -0.29
SRSF4-208ENST00000634348 SH2D4BQ5SQS7 431 aa13.23□□□□□ -0.29
SRSF4-208ENST00000634348 CYB5RLQ6IPT4 315 aa13.23□□□□□ -0.29
SRSF4-208ENST00000634348 RABGAP1Q9Y3P9 1069 aa13.23□□□□□ -0.29
SRSF4-208ENST00000634348 KIF5CO60282 957 aa13.22□□□□□ -0.29
SRSF4-208ENST00000634348 LUC7L2Q9Y383 392 aaKnown RBP13.22□□□□□ -0.29
SRSF4-208ENST00000634348 TANGO6Q9C0B7 1094 aa13.22□□□□□ -0.29
SRSF4-208ENST00000634348 RB1CC1Q8TDY2 1594 aa13.22□□□□□ -0.29
SRSF4-208ENST00000634348 CWC25Q9NXE8 425 aaPredicted RBP13.22□□□□□ -0.29
SRSF4-208ENST00000634348 GSTTP1A0A1W2PQM5 241 aa13.22□□□□□ -0.29
SRSF4-208ENST00000634348 SEPT8Q92599 483 aa13.22□□□□□ -0.29
SRSF4-208ENST00000634348 STK38Q15208 465 aa13.21□□□□□ -0.29
SRSF4-208ENST00000634348 NSRP1Q9H0G5 558 aaKnown RBP13.21□□□□□ -0.29
SRSF4-208ENST00000634348 ADAMTS8Q9UP79 889 aa13.21□□□□□ -0.29
SRSF4-208ENST00000634348 A0A1B0GUL7 405 aa13.21□□□□□ -0.29
SRSF4-208ENST00000634348 SRRTQ9BXP5 876 aaKnown RBP13.21□□□□□ -0.29
SRSF4-208ENST00000634348 STRN4Q9NRL3 753 aa13.21□□□□□ -0.29
SRSF4-208ENST00000634348 CETN2P41208 172 aa13.21□□□□□ -0.29
SRSF4-208ENST00000634348 FAM114A2Q9NRY5 505 aa13.21□□□□□ -0.29
SRSF4-208ENST00000634348 CCDC88BA6NC98 1476 aa13.21□□□□□ -0.3
SRSF4-208ENST00000634348 MCM2P49736 904 aa13.21□□□□□ -0.3
SRSF4-208ENST00000634348 GNAI1P63096 354 aa13.21□□□□□ -0.3
SRSF4-208ENST00000634348 PSMA5P28066 241 aa13.2□□□□□ -0.3
SRSF4-208ENST00000634348 CEP112Q8N8E3 955 aa13.2□□□□□ -0.3
SRSF4-208ENST00000634348 TSR2Q969E8 191 aaKnown RBP13.2□□□□□ -0.3
SRSF4-208ENST00000634348 CECR2Q9BXF3 1484 aa13.2□□□□□ -0.3
SRSF4-208ENST00000634348 ROCK1Q13464 1354 aa13.2□□□□□ -0.3
SRSF4-208ENST00000634348 NEBLO76041 1014 aa13.2□□□□□ -0.3
SRSF4-208ENST00000634348 ME1P48163 572 aa13.2□□□□□ -0.3
SRSF4-208ENST00000634348 MTHFSP49914 203 aa13.2□□□□□ -0.3
SRSF4-208ENST00000634348 ANAPC4Q9UJX5 808 aa13.2□□□□□ -0.3
SRSF4-208ENST00000634348 TTC36A6NLP5 189 aa13.2□□□□□ -0.3
SRSF4-208ENST00000634348 NLRP6P59044 892 aa13.2□□□□□ -0.3
SRSF4-208ENST00000634348 SMC6Q96SB8 1091 aa13.2□□□□□ -0.3
SRSF4-208ENST00000634348 CHMP2AO43633 222 aa13.2□□□□□ -0.3
SRSF4-208ENST00000634348 ATP2C2O75185 946 aa13.2□□□□□ -0.3
SRSF4-208ENST00000634348 URI1O94763 535 aaPredicted RBP13.2□□□□□ -0.3
SRSF4-208ENST00000634348 SSBP05455 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
SRSF4-208ENST00000634348 ZNF397Q8NF99 534 aaPredicted RBP13.2□□□□□ -0.3
SRSF4-208ENST00000634348 TAOK3Q9H2K8 898 aa13.2□□□□□ -0.3
SRSF4-208ENST00000634348 STMN1P16949 149 aa13.19□□□□□ -0.3
SRSF4-208ENST00000634348 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
SRSF4-208ENST00000634348 ZC4H2Q9NQZ6 224 aa13.19□□□□□ -0.3
SRSF4-208ENST00000634348 OTUD6BQ8N6M0 293 aa13.19□□□□□ -0.3
SRSF4-208ENST00000634348 SART3Q15020 963 aaKnown RBP13.19□□□□□ -0.3
SRSF4-208ENST00000634348 HOOK3Q86VS8 718 aa13.19□□□□□ -0.3
SRSF4-208ENST00000634348 AP1ARQ63HQ0 302 aa13.19□□□□□ -0.3
SRSF4-208ENST00000634348 CCDC85AQ96PX6 553 aaPredicted RBP13.19□□□□□ -0.3
SRSF4-208ENST00000634348 CNNM1Q9NRU3 951 aa13.19□□□□□ -0.3
SRSF4-208ENST00000634348 PDZRN3Q9UPQ7 1066 aa13.19□□□□□ -0.3
SRSF4-208ENST00000634348 TBC1D2BQ9UPU7 963 aa13.19□□□□□ -0.3
SRSF4-208ENST00000634348 MAP3K7CLP57077 242 aa13.19□□□□□ -0.3
SRSF4-208ENST00000634348 MXRA7P84157 204 aa13.19□□□□□ -0.3
SRSF4-208ENST00000634348 SH3BGRP55822 239 aaPredicted RBP13.18□□□□□ -0.3
SRSF4-208ENST00000634348 FMNL3Q8IVF7 1028 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms