RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 NGEFQ8N5V2 710 aa18.74■□□□□ 0.59
PHACTR4-209ENST00000633371 SPINK5Q9NQ38 1064 aaPredicted RBP18.73■□□□□ 0.59
PHACTR4-209ENST00000633371 OVOS2A0A0G2JMS6 1433 aa18.73■□□□□ 0.59
PHACTR4-209ENST00000633371 SPATA31A1Q5TZJ5 1347 aa18.73■□□□□ 0.59
PHACTR4-209ENST00000633371 SPATA31A5Q5VU36 1347 aa18.73■□□□□ 0.59
PHACTR4-209ENST00000633371 SPATA31A7Q8IWB4 1347 aa18.73■□□□□ 0.59
PHACTR4-209ENST00000633371 CDCA7LQ96GN5 454 aa18.72■□□□□ 0.59
PHACTR4-209ENST00000633371 ADAMTS7Q9UKP4 1686 aa18.71■□□□□ 0.59
PHACTR4-209ENST00000633371 AFF2P51816 1311 aa18.71■□□□□ 0.59
PHACTR4-209ENST00000633371 TATP17735 454 aaPredicted RBP18.7■□□□□ 0.58
PHACTR4-209ENST00000633371 PLEKHO1Q53GL0 409 aaPredicted RBP18.7■□□□□ 0.58
PHACTR4-209ENST00000633371 GAS2L2Q8NHY3 880 aa18.7■□□□□ 0.58
PHACTR4-209ENST00000633371 RAPGEF4Q8WZA2 1011 aa18.7■□□□□ 0.58
PHACTR4-209ENST00000633371 THUMPD2Q9BTF0 503 aaKnown RBP18.7■□□□□ 0.58
PHACTR4-209ENST00000633371 USP35Q9P2H5 1018 aa18.7■□□□□ 0.58
PHACTR4-209ENST00000633371 LRRC37A3O60309 1634 aa18.7■□□□□ 0.58
PHACTR4-209ENST00000633371 PLEKHG2Q9H7P9 1386 aa18.69■□□□□ 0.58
PHACTR4-209ENST00000633371 SCN11AQ9UI33 1791 aa18.69■□□□□ 0.58
PHACTR4-209ENST00000633371 NEFMP07197 916 aa18.69■□□□□ 0.58
PHACTR4-209ENST00000633371 DCTN1Q14203 1278 aa18.69■□□□□ 0.58
PHACTR4-209ENST00000633371 VPS72Q15906 364 aa18.69■□□□□ 0.58
PHACTR4-209ENST00000633371 MEX3CQ5U5Q3 659 aaKnown RBP18.69■□□□□ 0.58
PHACTR4-209ENST00000633371 USP21Q9UK80 565 aa18.69■□□□□ 0.58
PHACTR4-209ENST00000633371 GLI3P10071 1580 aa18.68■□□□□ 0.58
PHACTR4-209ENST00000633371 IL2RBP14784 551 aa18.68■□□□□ 0.58
PHACTR4-209ENST00000633371 TRMT2AQ8IZ69 625 aaKnown RBP18.68■□□□□ 0.58
PHACTR4-209ENST00000633371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.68■□□□□ 0.58
PHACTR4-209ENST00000633371 ATRNO75882 1429 aa18.67■□□□□ 0.58
PHACTR4-209ENST00000633371 SLFN5Q08AF3 891 aa18.67■□□□□ 0.58
PHACTR4-209ENST00000633371 AMOTQ4VCS5 1084 aa18.67■□□□□ 0.58
PHACTR4-209ENST00000633371 ZNF530Q6P9A1 599 aaPredicted RBP18.67■□□□□ 0.58
PHACTR4-209ENST00000633371 WDR63Q8IWG1 891 aa18.67■□□□□ 0.58
PHACTR4-209ENST00000633371 MAP3K5Q99683 1374 aa18.67■□□□□ 0.58
PHACTR4-209ENST00000633371 SIPA1L3O60292 1781 aaPredicted RBP18.66■□□□□ 0.58
PHACTR4-209ENST00000633371 CYP27B1O15528 508 aa18.66■□□□□ 0.58
PHACTR4-209ENST00000633371 MCM10Q7L590 875 aa18.66■□□□□ 0.58
PHACTR4-209ENST00000633371 IL17REQ8NFR9 667 aa18.66■□□□□ 0.58
PHACTR4-209ENST00000633371 GOLGA2Q08379 1002 aa18.65■□□□□ 0.58
PHACTR4-209ENST00000633371 PDE3BQ13370 1112 aa18.65■□□□□ 0.58
PHACTR4-209ENST00000633371 GNAT3A8MTJ3 354 aa18.64■□□□□ 0.57
PHACTR4-209ENST00000633371 HTATSF1O43719 755 aaKnown RBP18.64■□□□□ 0.57
PHACTR4-209ENST00000633371 AKAP4Q5JQC9 854 aa18.64■□□□□ 0.57
PHACTR4-209ENST00000633371 BARGINQ6ZT62 677 aa18.64■□□□□ 0.57
PHACTR4-209ENST00000633371 ZCRB1Q8TBF4 217 aaKnown RBP18.64■□□□□ 0.57
PHACTR4-209ENST00000633371 LGR6Q9HBX8 967 aa18.64■□□□□ 0.57
PHACTR4-209ENST00000633371 THRAP3Q9Y2W1 955 aaKnown RBP18.64■□□□□ 0.57
PHACTR4-209ENST00000633371 THSD7AQ9UPZ6 1657 aa18.63■□□□□ 0.57
PHACTR4-209ENST00000633371 ZNF853P0CG23 659 aa18.63■□□□□ 0.57
PHACTR4-209ENST00000633371 PHKG2P15735 406 aa18.63■□□□□ 0.57
PHACTR4-209ENST00000633371 DUSP27Q5VZP5 1158 aa18.63■□□□□ 0.57
PHACTR4-209ENST00000633371 SPG7Q9UQ90 795 aa18.63■□□□□ 0.57
PHACTR4-209ENST00000633371 CEMIPQ8WUJ3 1361 aa18.63■□□□□ 0.57
PHACTR4-209ENST00000633371 KDM6AO15550 1401 aaPredicted RBP18.63■□□□□ 0.57
PHACTR4-209ENST00000633371 LMOD3Q0VAK6 560 aa18.62■□□□□ 0.57
PHACTR4-209ENST00000633371 IL16Q14005 1332 aa18.62■□□□□ 0.57
PHACTR4-209ENST00000633371 TOGARAM1Q9Y4F4 1720 aa18.62■□□□□ 0.57
PHACTR4-209ENST00000633371 RNMTO43148 476 aaKnown RBP18.61■□□□□ 0.57
PHACTR4-209ENST00000633371 CCDC9Q9Y3X0 531 aaKnown RBP18.61■□□□□ 0.57
PHACTR4-209ENST00000633371 MPRIPQ6WCQ1 1025 aa18.6■□□□□ 0.57
PHACTR4-209ENST00000633371 TNS2Q63HR2 1409 aa18.59■□□□□ 0.57
PHACTR4-209ENST00000633371 E9PSI1 815 aa18.59■□□□□ 0.57
PHACTR4-209ENST00000633371 NKX1-1Q15270 411 aaPredicted RBP18.59■□□□□ 0.57
PHACTR4-209ENST00000633371 IFNL2Q8IZJ0 200 aa18.59■□□□□ 0.57
PHACTR4-209ENST00000633371 GJD4Q96KN9 370 aaPredicted RBP18.59■□□□□ 0.57
PHACTR4-209ENST00000633371 ITGB4P16144 1822 aa18.58■□□□□ 0.57
PHACTR4-209ENST00000633371 FAM98CQ17RN3 349 aaKnown RBP18.58■□□□□ 0.56
PHACTR4-209ENST00000633371 C1orf141Q5JVX7 400 aa18.58■□□□□ 0.56
PHACTR4-209ENST00000633371 CDCA7Q9BWT1 371 aaPredicted RBP18.58■□□□□ 0.56
PHACTR4-209ENST00000633371 QTRT2Q9H974 415 aaKnown RBP18.58■□□□□ 0.56
PHACTR4-209ENST00000633371 TRPC5Q9UL62 973 aaPredicted RBP18.58■□□□□ 0.56
PHACTR4-209ENST00000633371 KDM3BQ7LBC6 1761 aa18.58■□□□□ 0.56
PHACTR4-209ENST00000633371 PCDH11XQ9BZA7 1347 aa18.57■□□□□ 0.56
PHACTR4-209ENST00000633371 PCDH11YQ9BZA8 1340 aa18.57■□□□□ 0.56
PHACTR4-209ENST00000633371 CENPBP07199 599 aaPredicted RBP18.57■□□□□ 0.56
PHACTR4-209ENST00000633371 RTF1Q92541 710 aaKnown RBP18.57■□□□□ 0.56
PHACTR4-209ENST00000633371 TSR2Q969E8 191 aaKnown RBP18.57■□□□□ 0.56
PHACTR4-209ENST00000633371 RGS17Q9UGC6 210 aaPredicted RBP18.57■□□□□ 0.56
PHACTR4-209ENST00000633371 BRWD3Q6RI45 1802 aa18.57■□□□□ 0.56
PHACTR4-209ENST00000633371 CHL1O00533 1208 aa18.56■□□□□ 0.56
PHACTR4-209ENST00000633371 ONECUT3O60422 494 aaPredicted RBP18.56■□□□□ 0.56
PHACTR4-209ENST00000633371 DDX54Q8TDD1 881 aaKnown RBP18.56■□□□□ 0.56
PHACTR4-209ENST00000633371 IFT57Q9NWB7 429 aa18.56■□□□□ 0.56
PHACTR4-209ENST00000633371 MRC1P22897 1456 aa18.56■□□□□ 0.56
PHACTR4-209ENST00000633371 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
PHACTR4-209ENST00000633371 FANCIQ9NVI1 1328 aa18.55■□□□□ 0.56
PHACTR4-209ENST00000633371 EXOC5O00471 708 aa18.55■□□□□ 0.56
PHACTR4-209ENST00000633371 CFAP44Q96MT7 982 aa18.55■□□□□ 0.56
PHACTR4-209ENST00000633371 MBIPQ9NS73 344 aa18.55■□□□□ 0.56
PHACTR4-209ENST00000633371 ILDR1Q86SU0 546 aaPredicted RBP18.54■□□□□ 0.56
PHACTR4-209ENST00000633371 MARCH10Q8NA82 808 aaPredicted RBP18.54■□□□□ 0.56
PHACTR4-209ENST00000633371 MIS18AQ9NYP9 233 aa18.54■□□□□ 0.56
PHACTR4-209ENST00000633371 GNAI1P63096 354 aa18.53■□□□□ 0.56
PHACTR4-209ENST00000633371 CALD1Q05682 793 aaKnown RBP18.53■□□□□ 0.56
PHACTR4-209ENST00000633371 DDB1Q16531 1140 aa18.53■□□□□ 0.56
PHACTR4-209ENST00000633371 DCAF5Q96JK2 942 aa18.53■□□□□ 0.56
PHACTR4-209ENST00000633371 LAS1LQ9Y4W2 734 aaKnown RBP18.53■□□□□ 0.56
PHACTR4-209ENST00000633371 DOT1LQ8TEK3 1739 aa18.52■□□□□ 0.56
PHACTR4-209ENST00000633371 TAF7Q15545 349 aaPredicted RBP18.52■□□□□ 0.56
PHACTR4-209ENST00000633371 HSP90AB1P08238 724 aaKnown RBP18.51■□□□□ 0.55
PHACTR4-209ENST00000633371 MYH16Q9H6N6 1097 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms