RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 RHOQP17081 205 aa7.08□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 PTGIRP43119 386 aa7.08□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 PDXDC2PQ6P474 469 aa7.08□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 KDF1Q8NAX2 398 aaPredicted RBP7.08□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 LILRB3O75022 631 aa7.07□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 COL8A1P27658 744 aa7.07□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 ADD1P35611 737 aaKnown RBP7.07□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 RIPOR1Q6ZS17 1223 aa7.07□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 ALYREFQ86V81 257 aaKnown RBP7.07□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 ZNF784Q8NCA9 323 aaPredicted RBP7.07□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 HELBQ8NG08 1087 aaPredicted RBP7.07□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 GTPBP3Q969Y2 492 aaKnown RBP7.07□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 RSPH6AQ9H0K4 717 aa7.07□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 MX2P20592 715 aa7.06□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 ZBTB33Q86T24 672 aa7.06□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 TRERF1Q96PN7 1200 aa7.06□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 LIMD1Q9UGP4 676 aa7.06□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 MKL2Q9ULH7 1088 aa7.06□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 LILRA1O75019 489 aa7.05□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 LCE3BQ5TA77 95 aa7.05□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 NSFL1CQ9UNZ2 370 aaKnown RBP7.05□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 H7C1W4 665 aa7.04□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 RNF144AP50876 292 aaPredicted RBP7.04□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 RTL5Q5HYW3 569 aaPredicted RBP7.04□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 ITGB7P26010 798 aa7.03□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 RAB15P59190 212 aa7.03□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 DDRGK1Q96HY6 314 aa7.03□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 OXCT2Q9BYC2 517 aaPredicted RBP7.03□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 DYRK1BQ9Y463 629 aa7.03□□□□□ -1.28
NPHP3-ACAD11-202ENST00000632629 SHISA8B8ZZ34 492 aa7.02□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 KRTAP4-12Q9BQ66 201 aa7.02□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 FKBPLQ9UIM3 349 aa7.02□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 MYSM1Q5VVJ2 828 aa7.01□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 GAS2L1Q99501 681 aaPredicted RBP7.01□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 OCSTAMPQ9BR26 566 aa7.01□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 RRAGCQ9HB90 399 aa7.01□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 C1QTNF9BB2RNN3 333 aa7□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 ERVH48-1M5A8F1 160 aa7□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 GRIN2CQ14957 1233 aa7□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 NBPF20Q3BBV1 942 aa7□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 C1orf229Q6ZS94 237 aaPredicted RBP7□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 MAP2K3P46734 347 aa6.99□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 CTDSPL2Q05D32 466 aa6.99□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 ADAM32Q8TC27 787 aa6.99□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 SUV39H2Q9H5I1 410 aa6.99□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 CLK2P49760 499 aaKnown RBP6.98□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 PTK2Q05397 1052 aa6.98□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 ZMYM1Q5SVZ6 1142 aa6.98□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 CD163Q86VB7 1156 aa6.98□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 SEMA6BQ9H3T3 888 aa6.98□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 GPC1P35052 558 aa6.97□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 POU4F2Q12837 409 aa6.97□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 SH3D19Q5HYK7 790 aa6.97□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 LINC00114Q6XXX2 140 aa6.97□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 EDARADDQ8WWZ3 215 aa6.97□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 KDM4CQ9H3R0 1056 aa6.97□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 ZC3H4Q9UPT8 1303 aaKnown RBP6.97□□□□□ -1.29
NPHP3-ACAD11-202ENST00000632629 LRRN4Q8WUT4 740 aa6.96□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 KLRG1Q96E93 195 aa6.96□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 NUCKS1Q9H1E3 243 aaKnown RBP6.96□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 GPSM3Q9Y4H4 160 aa6.96□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 MEN1O00255 615 aa6.95□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 HOXB4P17483 251 aaPredicted RBP6.95□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 CHRNA4P43681 627 aa6.95□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 NR6A1Q15406 480 aa6.95□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 SKIV2LQ15477 1246 aaKnown RBP6.95□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 CFHR5Q9BXR6 569 aa6.95□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 GOPCQ9HD26 462 aa6.95□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 CYLDQ9NQC7 956 aa6.95□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 GDF2Q9UK05 429 aaPredicted RBP6.95□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 ATP5J2-PTCD1G3V325 749 aa6.94□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 DOC2BQ14184 412 aa6.94□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 A0A1W2PRU2 124 aa6.93□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 ESPNB1AK53 854 aa6.93□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 SLC27A3Q5K4L6 730 aa6.93□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 NBPF10Q6P3W6 841 aaKnown RBP6.93□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 NBPF15Q8N660 670 aa6.93□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 KRTAP9-9Q9BYP9 154 aa6.93□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 KRTAP9-4Q9BYQ2 154 aa6.93□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 GNB5O14775 395 aa6.92□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 F11P03951 625 aa6.92□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 AMPD1P23109 780 aa6.92□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 PPP2R2DQ66LE6 453 aa6.92□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 DZIP3Q86Y13 1208 aaKnown RBP6.92□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 BTBD11A6QL63 1104 aa6.91□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 PIK3R2O00459 728 aa6.91□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 THBS1P07996 1170 aa6.91□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 WDR44Q5JSH3 913 aa6.91□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 GOLGA6L1Q8N7Z2 621 aa6.91□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 GRIP2Q9C0E4 1043 aa6.91□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 TIMMDC1Q9NPL8 285 aa6.91□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 SCO2A0A1W2PP80 73 aa6.9□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 SPATA31C2B4DYI2 1134 aa6.9□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 SEPT12Q8IYM1 358 aa6.9□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 TRIM52Q96A61 297 aa6.9□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.9□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 PHF24Q9UPV7 400 aa6.9□□□□□ -1.3
NPHP3-ACAD11-202ENST00000632629 NLRP3Q96P20 1036 aa6.89□□□□□ -1.31
NPHP3-ACAD11-202ENST00000632629 FOXD4L6Q3SYB3 417 aaPredicted RBP6.88□□□□□ -1.31
NPHP3-ACAD11-202ENST00000632629 FOXD4L3Q6VB84 417 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms