RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 TCEAL9Q9UHQ7 104 aa6.23□□□□□ -1.41
SDCBP-213ENST00000630925 SALL2Q9Y467 1007 aaPredicted RBP6.23□□□□□ -1.41
SDCBP-213ENST00000630925 ENPP3O14638 875 aa6.22□□□□□ -1.41
SDCBP-213ENST00000630925 FGAP02671 866 aa6.22□□□□□ -1.41
SDCBP-213ENST00000630925 C1orf131Q8NDD1 294 aaKnown RBP6.22□□□□□ -1.41
SDCBP-213ENST00000630925 TSC1Q92574 1164 aa6.22□□□□□ -1.41
SDCBP-213ENST00000630925 PAGR1Q9BTK6 254 aa6.22□□□□□ -1.41
SDCBP-213ENST00000630925 FRMD4BQ9Y2L6 1034 aa6.22□□□□□ -1.41
SDCBP-213ENST00000630925 URB2Q14146 1524 aaKnown RBP6.22□□□□□ -1.41
SDCBP-213ENST00000630925 SYNJ2O15056 1496 aa6.22□□□□□ -1.41
SDCBP-213ENST00000630925 LZTS3O60299 673 aaPredicted RBP6.22□□□□□ -1.41
SDCBP-213ENST00000630925 PRR7Q8TB68 274 aa6.22□□□□□ -1.41
SDCBP-213ENST00000630925 ASB16Q96NS5 453 aa6.22□□□□□ -1.41
SDCBP-213ENST00000630925 PHF12Q96QT6 1004 aa6.22□□□□□ -1.41
SDCBP-213ENST00000630925 ACBD3Q9H3P7 528 aa6.22□□□□□ -1.41
SDCBP-213ENST00000630925 GRXCR2A6NFK2 248 aa6.21□□□□□ -1.41
SDCBP-213ENST00000630925 DHX16O60231 1041 aaKnown RBP6.21□□□□□ -1.41
SDCBP-213ENST00000630925 DNAJA1P31689 397 aaKnown RBP6.21□□□□□ -1.41
SDCBP-213ENST00000630925 TNNI2P48788 182 aa6.21□□□□□ -1.41
SDCBP-213ENST00000630925 COL19A1Q14993 1142 aa6.21□□□□□ -1.41
SDCBP-213ENST00000630925 TTC39BQ5VTQ0 682 aaPredicted RBP6.21□□□□□ -1.41
SDCBP-213ENST00000630925 EFCAB2Q5VUJ9 269 aa6.21□□□□□ -1.41
SDCBP-213ENST00000630925 CCSAPQ6IQ19 270 aaPredicted RBP6.21□□□□□ -1.41
SDCBP-213ENST00000630925 TBC1D9Q6ZT07 1266 aa6.21□□□□□ -1.41
SDCBP-213ENST00000630925 THRAP3Q9Y2W1 955 aaKnown RBP6.21□□□□□ -1.41
SDCBP-213ENST00000630925 CCDC61Q9Y6R9 512 aa6.21□□□□□ -1.41
SDCBP-213ENST00000630925 KIF13AQ9H1H9 1805 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 GOLGA6CA6NDK9 693 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 GOLGA6BA6NDN3 693 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 HSP90AA1P07900 732 aaKnown RBP6.21□□□□□ -1.42
SDCBP-213ENST00000630925 GOLGA6DP0CG33 693 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 FANCCQ00597 558 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 PTGDRQ13258 359 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 PPP1R15BQ5SWA1 713 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 ODR4Q5SWX8 454 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 ARMCX6Q7L4S7 300 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 CREBRFQ8IUR6 639 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 L3MBTL3Q96JM7 780 aaPredicted RBP6.21□□□□□ -1.42
SDCBP-213ENST00000630925 CCSER2Q9H7U1 834 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 CASS4Q9NQ75 786 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 TYW1Q9NV66 732 aaKnown RBP6.21□□□□□ -1.42
SDCBP-213ENST00000630925 GOLGA6AQ9NYA3 693 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 KLF15Q9UIH9 416 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 SH3BP1Q9Y3L3 701 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 NDUFB9Q9Y6M9 179 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 CLASP1Q7Z460 1538 aa6.21□□□□□ -1.42
SDCBP-213ENST00000630925 PPP1R3GB7ZBB8 358 aa6.2□□□□□ -1.42
SDCBP-213ENST00000630925 ATMINO43313 823 aaPredicted RBP6.2□□□□□ -1.42
SDCBP-213ENST00000630925 NRDCO43847 1150 aa6.2□□□□□ -1.42
SDCBP-213ENST00000630925 LDHAP00338 332 aaKnown RBP6.2□□□□□ -1.42
SDCBP-213ENST00000630925 XRCC5P13010 732 aaKnown RBP6.2□□□□□ -1.42
SDCBP-213ENST00000630925 MAN1A1P33908 653 aa6.2□□□□□ -1.42
SDCBP-213ENST00000630925 SCNN1AP37088 669 aa6.2□□□□□ -1.42
SDCBP-213ENST00000630925 RASSF7Q02833 373 aa6.2□□□□□ -1.42
SDCBP-213ENST00000630925 POU5F1BQ06416 359 aa6.2□□□□□ -1.42
SDCBP-213ENST00000630925 FAM161AQ3B820 660 aa6.2□□□□□ -1.42
SDCBP-213ENST00000630925 SOGA3Q5TF21 947 aa6.2□□□□□ -1.42
SDCBP-213ENST00000630925 EFCAB3Q8N7B9 438 aa6.2□□□□□ -1.42
SDCBP-213ENST00000630925 IER2Q9BTL4 223 aa6.2□□□□□ -1.42
SDCBP-213ENST00000630925 NOVA2Q9UNW9 492 aaKnown RBP6.2□□□□□ -1.42
SDCBP-213ENST00000630925 PDZRN3Q9UPQ7 1066 aa6.2□□□□□ -1.42
SDCBP-213ENST00000630925 FAM163BP0C2L3 166 aa6.19□□□□□ -1.42
SDCBP-213ENST00000630925 MMP14P50281 582 aa6.19□□□□□ -1.42
SDCBP-213ENST00000630925 FAM69CQ0P6D2 419 aa6.19□□□□□ -1.42
SDCBP-213ENST00000630925 SVIPQ8NHG7 77 aa6.19□□□□□ -1.42
SDCBP-213ENST00000630925 ENOX1Q8TC92 643 aaKnown RBP6.19□□□□□ -1.42
SDCBP-213ENST00000630925 AVENQ9NQS1 362 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-213ENST00000630925 FANCD2Q9BXW9 1451 aa6.19□□□□□ -1.42
SDCBP-213ENST00000630925 IFRD1O00458 451 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-213ENST00000630925 COL6A1P12109 1028 aa6.19□□□□□ -1.42
SDCBP-213ENST00000630925 GNALP38405 381 aa6.19□□□□□ -1.42
SDCBP-213ENST00000630925 SAFB2Q14151 953 aaKnown RBP eCLIP6.19□□□□□ -1.42
SDCBP-213ENST00000630925 ENOX2Q16206 610 aaKnown RBP6.19□□□□□ -1.42
SDCBP-213ENST00000630925 NAP1L4Q99733 375 aaKnown RBP6.19□□□□□ -1.42
SDCBP-213ENST00000630925 VDRP11473 427 aa6.18□□□□□ -1.42
SDCBP-213ENST00000630925 CBLBQ13191 982 aa6.18□□□□□ -1.42
SDCBP-213ENST00000630925 PUS10Q3MIT2 529 aaKnown RBP6.18□□□□□ -1.42
SDCBP-213ENST00000630925 EAPPQ56P03 285 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-213ENST00000630925 DDX46Q7L014 1031 aaKnown RBP6.18□□□□□ -1.42
SDCBP-213ENST00000630925 ZNF710Q8N1W2 664 aa6.18□□□□□ -1.42
SDCBP-213ENST00000630925 MKL1Q969V6 931 aa6.18□□□□□ -1.42
SDCBP-213ENST00000630925 EIF4G3O43432 1585 aaKnown RBP6.18□□□□□ -1.42
SDCBP-213ENST00000630925 PEG3Q9GZU2 1588 aa6.18□□□□□ -1.42
SDCBP-213ENST00000630925 ADGRL1O94910 1474 aa6.18□□□□□ -1.42
SDCBP-213ENST00000630925 USP17L8P0C7I0 530 aa6.18□□□□□ -1.42
SDCBP-213ENST00000630925 PDE6BP35913 854 aa6.18□□□□□ -1.42
SDCBP-213ENST00000630925 LCE2DQ5TA82 110 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-213ENST00000630925 PDILTQ8N807 584 aa6.18□□□□□ -1.42
SDCBP-213ENST00000630925 TMEM87AQ8NBN3 555 aa6.18□□□□□ -1.42
SDCBP-213ENST00000630925 RELTQ969Z4 430 aa6.18□□□□□ -1.42
SDCBP-213ENST00000630925 FRMD6Q96NE9 622 aa6.18□□□□□ -1.42
SDCBP-213ENST00000630925 APBA2Q99767 749 aa6.18□□□□□ -1.42
SDCBP-213ENST00000630925 MKRN1Q9UHC7 482 aaKnown RBP6.18□□□□□ -1.42
SDCBP-213ENST00000630925 TNFRSF10BO14763 440 aa6.17□□□□□ -1.42
SDCBP-213ENST00000630925 ATP9BO43861 1147 aa6.17□□□□□ -1.42
SDCBP-213ENST00000630925 MAPRE1Q15691 268 aaKnown RBP6.17□□□□□ -1.42
SDCBP-213ENST00000630925 RAVER1Q8IY67 606 aaKnown RBP6.17□□□□□ -1.42
SDCBP-213ENST00000630925 CLP1Q92989 425 aaKnown RBP6.17□□□□□ -1.42
SDCBP-213ENST00000630925 TSR2Q969E8 191 aaKnown RBP6.17□□□□□ -1.42
SDCBP-213ENST00000630925 GOLIM4O00461 696 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms