RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 CAVIN1Q6NZI2 390 aaKnown RBP16.74■□□□□ 0.27
UBE3A-220ENST00000630424 BMP2KQ9NSY1 1161 aaPredicted RBP16.74■□□□□ 0.27
UBE3A-220ENST00000630424 EXOC6BQ9Y2D4 811 aa16.74■□□□□ 0.27
UBE3A-220ENST00000630424 PRPF40AO75400 957 aaKnown RBP16.73■□□□□ 0.27
UBE3A-220ENST00000630424 TMPOP42166 694 aaKnown RBP16.73■□□□□ 0.27
UBE3A-220ENST00000630424 TOPBP1Q92547 1522 aa16.73■□□□□ 0.27
UBE3A-220ENST00000630424 POLR3DP05423 398 aaPredicted RBP16.73■□□□□ 0.27
UBE3A-220ENST00000630424 TANGO6Q9C0B7 1094 aa16.73■□□□□ 0.27
UBE3A-220ENST00000630424 MBD3O95983 291 aa16.73■□□□□ 0.27
UBE3A-220ENST00000630424 STIM1Q13586 685 aa16.73■□□□□ 0.27
UBE3A-220ENST00000630424 AMOTQ4VCS5 1084 aa16.73■□□□□ 0.27
UBE3A-220ENST00000630424 MVPQ14764 893 aaKnown RBP16.72■□□□□ 0.27
UBE3A-220ENST00000630424 SMARCE1Q969G3 411 aa16.72■□□□□ 0.27
UBE3A-220ENST00000630424 MYD88Q99836 296 aa16.72■□□□□ 0.27
UBE3A-220ENST00000630424 MINDY4BA8MYZ0 360 aa16.72■□□□□ 0.27
UBE3A-220ENST00000630424 SETQ01105 290 aaPredicted RBP16.72■□□□□ 0.27
UBE3A-220ENST00000630424 LARP1BQ659C4 914 aaKnown RBP16.72■□□□□ 0.27
UBE3A-220ENST00000630424 POLA1P09884 1462 aaPredicted RBP16.72■□□□□ 0.27
UBE3A-220ENST00000630424 CDKL5O76039 1030 aa16.72■□□□□ 0.27
UBE3A-220ENST00000630424 RPGRQ92834 1020 aaKnown RBP16.72■□□□□ 0.27
UBE3A-220ENST00000630424 NSD3Q9BZ95 1437 aa16.72■□□□□ 0.27
UBE3A-220ENST00000630424 MKNK2Q9HBH9 465 aa16.72■□□□□ 0.27
UBE3A-220ENST00000630424 C6orf229H3BNL8 230 aa16.71■□□□□ 0.27
UBE3A-220ENST00000630424 TAF7Q15545 349 aaPredicted RBP16.71■□□□□ 0.27
UBE3A-220ENST00000630424 DZIP1Q86YF9 867 aaKnown RBP16.71■□□□□ 0.27
UBE3A-220ENST00000630424 AK7Q96M32 723 aa16.71■□□□□ 0.27
UBE3A-220ENST00000630424 JAKMIP1Q96N16 626 aaKnown RBP16.71■□□□□ 0.27
UBE3A-220ENST00000630424 AKAP2Q9Y2D5 859 aa16.71■□□□□ 0.27
UBE3A-220ENST00000630424 IDI1Q13907 227 aa16.71■□□□□ 0.27
UBE3A-220ENST00000630424 ZNF287Q9HBT7 754 aa16.71■□□□□ 0.27
UBE3A-220ENST00000630424 ZNHIT6Q9NWK9 470 aaKnown RBP16.71■□□□□ 0.27
UBE3A-220ENST00000630424 IFIT5Q13325 482 aaKnown RBP16.71■□□□□ 0.27
UBE3A-220ENST00000630424 NUTM1Q86Y26 1132 aa16.71■□□□□ 0.27
UBE3A-220ENST00000630424 RPAP2Q8IXW5 612 aaPredicted RBP16.71■□□□□ 0.27
UBE3A-220ENST00000630424 GPTP24298 496 aa16.7■□□□□ 0.26
UBE3A-220ENST00000630424 KRT28Q7Z3Y7 464 aa16.7■□□□□ 0.26
UBE3A-220ENST00000630424 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
UBE3A-220ENST00000630424 HSP90B2PQ58FF3 399 aa16.7■□□□□ 0.26
UBE3A-220ENST00000630424 ARGLU1Q9NWB6 273 aaPredicted RBP16.7■□□□□ 0.26
UBE3A-220ENST00000630424 FAM13BQ9NYF5 915 aa16.7■□□□□ 0.26
UBE3A-220ENST00000630424 MATR3P43243 847 aaKnown RBP eCLIP16.69■□□□□ 0.264e-6■■■■■ 30.9
UBE3A-220ENST00000630424 IMMTQ16891 758 aaKnown RBP16.69■□□□□ 0.26
UBE3A-220ENST00000630424 CHD1LQ86WJ1 897 aa16.69■□□□□ 0.26
UBE3A-220ENST00000630424 EMILIN1Q9Y6C2 1016 aa16.69■□□□□ 0.26
UBE3A-220ENST00000630424 SERPINC1P01008 464 aa16.69■□□□□ 0.26
UBE3A-220ENST00000630424 UBAP1LF5GYI3 381 aa16.68■□□□□ 0.26
UBE3A-220ENST00000630424 CADPS2Q86UW7 1296 aa16.68■□□□□ 0.26
UBE3A-220ENST00000630424 ACBD3Q9H3P7 528 aa16.68■□□□□ 0.26
UBE3A-220ENST00000630424 ZBTB3Q9H5J0 574 aa16.68■□□□□ 0.26
UBE3A-220ENST00000630424 NASPP49321 788 aaPredicted RBP16.68■□□□□ 0.26
UBE3A-220ENST00000630424 KRT85P78386 507 aa16.68■□□□□ 0.26
UBE3A-220ENST00000630424 KRT32Q14532 448 aa16.68■□□□□ 0.26
UBE3A-220ENST00000630424 HSP90AB3PQ58FF7 597 aa16.68■□□□□ 0.26
UBE3A-220ENST00000630424 AEBP1Q8IUX7 1158 aa16.68■□□□□ 0.26
UBE3A-220ENST00000630424 HSP90AA2PQ14568 343 aaPredicted RBP16.68■□□□□ 0.26
UBE3A-220ENST00000630424 CHRNA2Q15822 529 aa16.67■□□□□ 0.26
UBE3A-220ENST00000630424 DEF6Q9H4E7 631 aa16.67■□□□□ 0.26
UBE3A-220ENST00000630424 PDRG1Q9NUG6 133 aa16.67■□□□□ 0.26
UBE3A-220ENST00000630424 ERICH3Q5RHP9 1530 aa16.67■□□□□ 0.26
UBE3A-220ENST00000630424 WASLO00401 505 aaPredicted RBP16.67■□□□□ 0.26
UBE3A-220ENST00000630424 LETM1O95202 739 aaPredicted RBP16.67■□□□□ 0.26
UBE3A-220ENST00000630424 KIF1BPQ96EK5 621 aa16.67■□□□□ 0.26
UBE3A-220ENST00000630424 SCLT1Q96NL6 688 aa16.67■□□□□ 0.26
UBE3A-220ENST00000630424 SKIDA1Q1XH10 827 aa16.66■□□□□ 0.26
UBE3A-220ENST00000630424 BOLA2Q9H3K6 86 aa16.66■□□□□ 0.26
UBE3A-220ENST00000630424 EHBP1L1Q8N3D4 1523 aa16.66■□□□□ 0.26
UBE3A-220ENST00000630424 TEX35Q5T0J7 233 aa16.66■□□□□ 0.26
UBE3A-220ENST00000630424 NAPBQ9H115 298 aa16.66■□□□□ 0.26
UBE3A-220ENST00000630424 MYO6Q9UM54 1294 aa16.66■□□□□ 0.26
UBE3A-220ENST00000630424 DAPK1P53355 1430 aa16.66■□□□□ 0.26
UBE3A-220ENST00000630424 A0A087WZG4 1122 aa16.65■□□□□ 0.26
UBE3A-220ENST00000630424 TMEM57Q8N5G2 664 aa16.65■□□□□ 0.26
UBE3A-220ENST00000630424 WDR33Q9C0J8 1336 aaKnown RBP16.65■□□□□ 0.26
UBE3A-220ENST00000630424 NFKBIBQ15653 356 aa16.65■□□□□ 0.26
UBE3A-220ENST00000630424 NOM1Q5C9Z4 860 aaKnown RBP16.65■□□□□ 0.26
UBE3A-220ENST00000630424 EPRSP07814 1512 aaKnown RBP16.65■□□□□ 0.26
UBE3A-220ENST00000630424 TRAK2O60296 914 aa16.65■□□□□ 0.26
UBE3A-220ENST00000630424 MAP3K12Q12852 859 aa16.65■□□□□ 0.26
UBE3A-220ENST00000630424 DDX11Q96FC9 970 aa16.65■□□□□ 0.26
UBE3A-220ENST00000630424 SEC63Q9UGP8 760 aaKnown RBP16.65■□□□□ 0.26
UBE3A-220ENST00000630424 LUC7LQ9NQ29 371 aaKnown RBP16.65■□□□□ 0.26
UBE3A-220ENST00000630424 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
UBE3A-220ENST00000630424 KIAA0586Q9BVV6 1533 aa16.64■□□□□ 0.25
UBE3A-220ENST00000630424 PPFIBP1Q86W92 1011 aa16.64■□□□□ 0.25
UBE3A-220ENST00000630424 SEPT11Q9NVA2 429 aaKnown RBP16.64■□□□□ 0.25
UBE3A-220ENST00000630424 CC2D2AQ9P2K1 1620 aa16.64■□□□□ 0.25
UBE3A-220ENST00000630424 ZNF622Q969S3 477 aaKnown RBP eCLIP16.64■□□□□ 0.251e-10■□□□□ 11.3
UBE3A-220ENST00000630424 GLRX3O76003 335 aaKnown RBP16.64■□□□□ 0.25
UBE3A-220ENST00000630424 CCDC96Q2M329 555 aa16.64■□□□□ 0.25
UBE3A-220ENST00000630424 FAM43AQ8N2R8 423 aa16.64■□□□□ 0.25
UBE3A-220ENST00000630424 TNMDQ9H2S6 317 aa16.64■□□□□ 0.25
UBE3A-220ENST00000630424 DACH1Q9UI36 760 aa16.64■□□□□ 0.25
UBE3A-220ENST00000630424 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
UBE3A-220ENST00000630424 ANKRD18BA2A2Z9 1011 aa16.63■□□□□ 0.25
UBE3A-220ENST00000630424 TOM1O60784 492 aa16.63■□□□□ 0.25
UBE3A-220ENST00000630424 ZNF771Q7L3S4 317 aaPredicted RBP16.63■□□□□ 0.25
UBE3A-220ENST00000630424 WASF1Q92558 559 aa16.63■□□□□ 0.25
UBE3A-220ENST00000630424 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
UBE3A-220ENST00000630424 EFCAB5A4FU69 1503 aa16.63■□□□□ 0.25
UBE3A-220ENST00000630424 LRPPRCP42704 1394 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms