RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 RUNDC1Q96C34 613 aa15.29■□□□□ 0.04
PTPN7-219ENST00000629151 MAPK8IP3Q9UPT6 1336 aa15.28■□□□□ 0.04
PTPN7-219ENST00000629151 DDB1Q16531 1140 aa15.28■□□□□ 0.04
PTPN7-219ENST00000629151 POTEAQ6S8J7 498 aa15.28■□□□□ 0.04
PTPN7-219ENST00000629151 NGEFQ8N5V2 710 aa15.28■□□□□ 0.04
PTPN7-219ENST00000629151 GAS2L2Q8NHY3 880 aa15.28■□□□□ 0.04
PTPN7-219ENST00000629151 DISP2A7MBM2 1401 aa15.27■□□□□ 0.04
PTPN7-219ENST00000629151 A0A0G2JS52 829 aa15.27■□□□□ 0.04
PTPN7-219ENST00000629151 MYT1Q01538 1121 aa15.27■□□□□ 0.04
PTPN7-219ENST00000629151 PDE3BQ13370 1112 aa15.27■□□□□ 0.04
PTPN7-219ENST00000629151 NCBP3Q53F19 620 aaKnown RBP15.27■□□□□ 0.04
PTPN7-219ENST00000629151 SEPT12Q8IYM1 358 aa15.27■□□□□ 0.04
PTPN7-219ENST00000629151 FAM9BQ8IZU0 186 aa15.27■□□□□ 0.04
PTPN7-219ENST00000629151 PLEKHF1Q96S99 279 aa15.27■□□□□ 0.04
PTPN7-219ENST00000629151 OVOS2A0A0G2JMS6 1433 aa15.26■□□□□ 0.03
PTPN7-219ENST00000629151 HSP90AB1P08238 724 aaKnown RBP15.26■□□□□ 0.03
PTPN7-219ENST00000629151 PCDH11XQ9BZA7 1347 aa15.25■□□□□ 0.03
PTPN7-219ENST00000629151 PCDH11YQ9BZA8 1340 aa15.25■□□□□ 0.03
PTPN7-219ENST00000629151 IFNL2Q8IZJ0 200 aa15.25■□□□□ 0.03
PTPN7-219ENST00000629151 RGPD5Q99666 1765 aa15.24■□□□□ 0.03
PTPN7-219ENST00000629151 RGPD1P0DJD0 1748 aa15.24■□□□□ 0.03
PTPN7-219ENST00000629151 HTATSF1O43719 755 aaKnown RBP15.24■□□□□ 0.03
PTPN7-219ENST00000629151 C1orf141Q5JVX7 400 aa15.24■□□□□ 0.03
PTPN7-219ENST00000629151 LMOD3Q0VAK6 560 aa15.23■□□□□ 0.03
PTPN7-219ENST00000629151 AKAP4Q5JQC9 854 aa15.23■□□□□ 0.03
PTPN7-219ENST00000629151 PHACTR3Q96KR7 559 aa15.23■□□□□ 0.03
PTPN7-219ENST00000629151 MEGF6O75095 1541 aa15.22■□□□□ 0.03
PTPN7-219ENST00000629151 NKX1-1Q15270 411 aaPredicted RBP15.22■□□□□ 0.03
PTPN7-219ENST00000629151 NFE2L2Q16236 605 aa15.22■□□□□ 0.03
PTPN7-219ENST00000629151 MTHFSDQ2M296 383 aaKnown RBP15.22■□□□□ 0.03
PTPN7-219ENST00000629151 ZNF530Q6P9A1 599 aaPredicted RBP15.22■□□□□ 0.03
PTPN7-219ENST00000629151 GLI3P10071 1580 aa15.22■□□□□ 0.03
PTPN7-219ENST00000629151 KRT27Q7Z3Y8 459 aa15.21■□□□□ 0.03
PTPN7-219ENST00000629151 DDX54Q8TDD1 881 aaKnown RBP15.21■□□□□ 0.03
PTPN7-219ENST00000629151 TNS2Q63HR2 1409 aa15.2■□□□□ 0.02
PTPN7-219ENST00000629151 GNAT3A8MTJ3 354 aa15.2■□□□□ 0.02
PTPN7-219ENST00000629151 PHKG2P15735 406 aa15.2■□□□□ 0.02
PTPN7-219ENST00000629151 TMPOP42166 694 aaKnown RBP15.2■□□□□ 0.02
PTPN7-219ENST00000629151 CCDC146Q8IYE0 955 aa15.2■□□□□ 0.02
PTPN7-219ENST00000629151 RTF1Q92541 710 aaKnown RBP15.2■□□□□ 0.02
PTPN7-219ENST00000629151 DCAF5Q96JK2 942 aa15.2■□□□□ 0.02
PTPN7-219ENST00000629151 CYP27B1O15528 508 aa15.19■□□□□ 0.02
PTPN7-219ENST00000629151 FAM196AQ6ZSG2 479 aa15.19■□□□□ 0.02
PTPN7-219ENST00000629151 APAF1O14727 1248 aa15.18■□□□□ 0.02
PTPN7-219ENST00000629151 RIPK4P57078 832 aa15.18■□□□□ 0.02
PTPN7-219ENST00000629151 CCDC27Q2M243 656 aa15.18■□□□□ 0.02
PTPN7-219ENST00000629151 BCL9O00512 1426 aa15.17■□□□□ 0.02
PTPN7-219ENST00000629151 CALD1Q05682 793 aaKnown RBP15.17■□□□□ 0.02
PTPN7-219ENST00000629151 MARCH10Q8NA82 808 aaPredicted RBP15.17■□□□□ 0.02
PTPN7-219ENST00000629151 THSD7AQ9UPZ6 1657 aa15.16■□□□□ 0.02
PTPN7-219ENST00000629151 MAP3K5Q99683 1374 aa15.16■□□□□ 0.02
PTPN7-219ENST00000629151 ERVV-2B6SEH9 535 aa15.16■□□□□ 0.02
PTPN7-219ENST00000629151 PARP4Q9UKK3 1724 aaKnown RBP15.16■□□□□ 0.02
PTPN7-219ENST00000629151 RGS12O14924 1447 aa15.15■□□□□ 0.02
PTPN7-219ENST00000629151 RNMTO43148 476 aaKnown RBP15.14■□□□□ 0.01
PTPN7-219ENST00000629151 RGPD2P0DJD1 1756 aa15.13■□□□□ 0.01
PTPN7-219ENST00000629151 NEUROD2Q15784 382 aa15.13■□□□□ 0.01
PTPN7-219ENST00000629151 TEFQ10587 303 aa15.12■□□□□ 0.01
PTPN7-219ENST00000629151 MPRIPQ6WCQ1 1025 aa15.12■□□□□ 0.01
PTPN7-219ENST00000629151 BABAM1Q9NWV8 329 aa15.12■□□□□ 0.01
PTPN7-219ENST00000629151 CABP4P57796 275 aa15.11■□□□□ 0.01
PTPN7-219ENST00000629151 IL17REQ8NFR9 667 aa15.11■□□□□ 0.01
PTPN7-219ENST00000629151 RRP7AQ9Y3A4 280 aaKnown RBP15.11■□□□□ 0.01
PTPN7-219ENST00000629151 PKD1L3Q7Z443 1732 aa15.11■□□□□ 0.01
PTPN7-219ENST00000629151 CEMIPQ8WUJ3 1361 aa15.11■□□□□ 0.01
PTPN7-219ENST00000629151 LRRC37A3O60309 1634 aa15.1■□□□□ 0.01
PTPN7-219ENST00000629151 HMGB2P26583 209 aaKnown RBP15.1■□□□□ 0.01
PTPN7-219ENST00000629151 WDR63Q8IWG1 891 aa15.1■□□□□ 0.01
PTPN7-219ENST00000629151 SLC52A2Q9HAB3 445 aa15.1■□□□□ 0.01
PTPN7-219ENST00000629151 TMOD3Q9NYL9 352 aa15.1■□□□□ 0.01
PTPN7-219ENST00000629151 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
PTPN7-219ENST00000629151 TAF7Q15545 349 aaPredicted RBP15.09■□□□□ 0.01
PTPN7-219ENST00000629151 CCDC125Q86Z20 511 aa15.09■□□□□ 0.01
PTPN7-219ENST00000629151 WWC1Q8IX03 1113 aa15.09■□□□□ 0.01
PTPN7-219ENST00000629151 BCL11BQ9C0K0 894 aaPredicted RBP15.09■□□□□ 0.01
PTPN7-219ENST00000629151 LGR6Q9HBX8 967 aa15.09■□□□□ 0.01
PTPN7-219ENST00000629151 IL16Q14005 1332 aa15.09■□□□□ 0.01
PTPN7-219ENST00000629151 PRIM1P49642 420 aaKnown RBP15.08■□□□□ 0
PTPN7-219ENST00000629151 HNRNPUQ00839 825 aaKnown RBP eCLIP15.08■□□□□ 0
PTPN7-219ENST00000629151 MCM10Q7L590 875 aa15.08■□□□□ 0
PTPN7-219ENST00000629151 WNK3Q9BYP7 1800 aa15.08■□□□□ 0
PTPN7-219ENST00000629151 NFATC2IPQ8NCF5 419 aa15.07■□□□□ 0
PTPN7-219ENST00000629151 SMARCC1Q92922 1105 aaPredicted RBP15.07■□□□□ 0
PTPN7-219ENST00000629151 SYTL4Q96C24 671 aaPredicted RBP15.07■□□□□ 0
PTPN7-219ENST00000629151 GNAI1P63096 354 aa15.06■□□□□ 0
PTPN7-219ENST00000629151 KDM6AO15550 1401 aaPredicted RBP15.06■□□□□ 0
PTPN7-219ENST00000629151 SF3B2Q13435 895 aaKnown RBP15.05■□□□□ -0
PTPN7-219ENST00000629151 DCTN1Q14203 1278 aa15.05■□□□□ -0
PTPN7-219ENST00000629151 FAM182BQ5T319 152 aa15.05■□□□□ -0
PTPN7-219ENST00000629151 CFAP44Q96MT7 982 aa15.05■□□□□ -0
PTPN7-219ENST00000629151 IFT57Q9NWB7 429 aa15.05■□□□□ -0
PTPN7-219ENST00000629151 ZNF521Q96K83 1311 aa15.04■□□□□ -0
PTPN7-219ENST00000629151 BTBD11A6QL63 1104 aa15.04■□□□□ -0
PTPN7-219ENST00000629151 GOLGA2Q08379 1002 aa15.04■□□□□ -0
PTPN7-219ENST00000629151 PIGBQ92521 554 aa15.04■□□□□ -0
PTPN7-219ENST00000629151 ACSBG1Q96GR2 724 aa15.04■□□□□ -0
PTPN7-219ENST00000629151 MYH16Q9H6N6 1097 aa15.04■□□□□ -0
PTPN7-219ENST00000629151 SALL2Q9Y467 1007 aaPredicted RBP15.04■□□□□ -0
PTPN7-219ENST00000629151 ZBED9Q6R2W3 1325 aa15.03■□□□□ -0
PTPN7-219ENST00000629151 CHL1O00533 1208 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 459 ms