RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 AFF2P51816 1311 aa11.03□□□□□ -0.64
TCF4-260ENST00000627685 ROCK2O75116 1388 aaKnown RBP11.03□□□□□ -0.64
TCF4-260ENST00000627685 PIK3C2AO00443 1686 aa11.02□□□□□ -0.64
TCF4-260ENST00000627685 CAMK2BQ13554 666 aa11.02□□□□□ -0.65
TCF4-260ENST00000627685 KRT28Q7Z3Y7 464 aa11.02□□□□□ -0.65
TCF4-260ENST00000627685 ZNF687Q8N1G0 1237 aa11.02□□□□□ -0.65
TCF4-260ENST00000627685 PMFBP1Q8TBY8 1022 aa11.02□□□□□ -0.65
TCF4-260ENST00000627685 NUDT16Q96DE0 195 aaKnown RBP11.02□□□□□ -0.65
TCF4-260ENST00000627685 LMO7Q8WWI1 1683 aa11.01□□□□□ -0.65
TCF4-260ENST00000627685 NUTM2BA6NNL0 878 aaPredicted RBP11.01□□□□□ -0.65
TCF4-260ENST00000627685 NUTM2EB1AL46 878 aaPredicted RBP11.01□□□□□ -0.65
TCF4-260ENST00000627685 EVI5O60447 810 aa11.01□□□□□ -0.65
TCF4-260ENST00000627685 MEX3CQ5U5Q3 659 aaKnown RBP11.01□□□□□ -0.65
TCF4-260ENST00000627685 NUTM2AQ8IVF1 878 aaPredicted RBP11.01□□□□□ -0.65
TCF4-260ENST00000627685 CDK19Q9BWU1 502 aa11.01□□□□□ -0.65
TCF4-260ENST00000627685 CPSF1Q10570 1443 aaKnown RBP11.01□□□□□ -0.65
TCF4-260ENST00000627685 PPIP5K1Q6PFW1 1433 aa11.01□□□□□ -0.65
TCF4-260ENST00000627685 SLIT3O75094 1523 aa11□□□□□ -0.65
TCF4-260ENST00000627685 PLEKHG3A1L390 1219 aa11□□□□□ -0.65
TCF4-260ENST00000627685 USP54Q70EL1 1684 aa11□□□□□ -0.65
TCF4-260ENST00000627685 TONSLQ96HA7 1378 aa11□□□□□ -0.65
TCF4-260ENST00000627685 AKAP12Q02952 1782 aa11□□□□□ -0.65
TCF4-260ENST00000627685 USP6P35125 1406 aa11□□□□□ -0.65
TCF4-260ENST00000627685 MON2Q7Z3U7 1717 aa10.99□□□□□ -0.65
TCF4-260ENST00000627685 NWD2Q9ULI1 1742 aa10.99□□□□□ -0.65
TCF4-260ENST00000627685 ADAMTS2O95450 1211 aa10.99□□□□□ -0.65
TCF4-260ENST00000627685 E2F4Q16254 413 aa10.99□□□□□ -0.65
TCF4-260ENST00000627685 CABLES1Q8TDN4 633 aa10.99□□□□□ -0.65
TCF4-260ENST00000627685 TESK2Q96S53 571 aa10.99□□□□□ -0.65
TCF4-260ENST00000627685 KRTAP3-3Q9BYR6 98 aa10.99□□□□□ -0.65
TCF4-260ENST00000627685 KRTAP3-2Q9BYR7 98 aa10.99□□□□□ -0.65
TCF4-260ENST00000627685 PLSCR2Q9NRY7 297 aa10.99□□□□□ -0.65
TCF4-260ENST00000627685 ARHGEF10O15013 1369 aa10.99□□□□□ -0.65
TCF4-260ENST00000627685 PSDA5PKW4 1024 aaPredicted RBP10.98□□□□□ -0.65
TCF4-260ENST00000627685 DPYSL4O14531 572 aa10.98□□□□□ -0.65
TCF4-260ENST00000627685 C8orf37Q96NL8 207 aa10.98□□□□□ -0.65
TCF4-260ENST00000627685 USP19O94966 1318 aa10.98□□□□□ -0.65
TCF4-260ENST00000627685 ACEP12821 1306 aa10.98□□□□□ -0.65
TCF4-260ENST00000627685 HAP1P54257 671 aaPredicted RBP10.97□□□□□ -0.65
TCF4-260ENST00000627685 COL14A1Q05707 1796 aaKnown RBP10.96□□□□□ -0.65
TCF4-260ENST00000627685 CLSPNQ9HAW4 1339 aa10.96□□□□□ -0.65
TCF4-260ENST00000627685 ANO8Q9HCE9 1232 aaPredicted RBP10.96□□□□□ -0.65
TCF4-260ENST00000627685 MYOM1P52179 1685 aa10.95□□□□□ -0.66
TCF4-260ENST00000627685 THSD7AQ9UPZ6 1657 aa10.95□□□□□ -0.66
TCF4-260ENST00000627685 NFAT5O94916 1531 aa10.95□□□□□ -0.66
TCF4-260ENST00000627685 RXRBP28702 533 aa10.95□□□□□ -0.66
TCF4-260ENST00000627685 PPP4R3BQ5MIZ7 849 aa10.95□□□□□ -0.66
TCF4-260ENST00000627685 ZNF454Q8N9F8 522 aa10.94□□□□□ -0.66
TCF4-260ENST00000627685 PCGF6Q9BYE7 350 aa10.94□□□□□ -0.66
TCF4-260ENST00000627685 COL18A1P39060 1754 aa10.93□□□□□ -0.66
TCF4-260ENST00000627685 CAMTA1Q9Y6Y1 1673 aa10.93□□□□□ -0.66
TCF4-260ENST00000627685 RBM6P78332 1123 aaKnown RBP10.93□□□□□ -0.66
TCF4-260ENST00000627685 PSME1Q06323 249 aa10.93□□□□□ -0.66
TCF4-260ENST00000627685 NGLY1Q96IV0 654 aa10.93□□□□□ -0.66
TCF4-260ENST00000627685 AXIN2Q9Y2T1 843 aa10.93□□□□□ -0.66
TCF4-260ENST00000627685 CPDO75976 1380 aa10.92□□□□□ -0.66
TCF4-260ENST00000627685 CARD11Q9BXL7 1154 aa10.92□□□□□ -0.66
TCF4-260ENST00000627685 QTRT2Q9H974 415 aaKnown RBP10.92□□□□□ -0.66
TCF4-260ENST00000627685 USP21Q9UK80 565 aa10.92□□□□□ -0.66
TCF4-260ENST00000627685 BRD4O60885 1362 aaPredicted RBP10.91□□□□□ -0.66
TCF4-260ENST00000627685 ATAD2Q6PL18 1390 aa10.91□□□□□ -0.66
TCF4-260ENST00000627685 KIAA0232Q92628 1395 aa10.91□□□□□ -0.66
TCF4-260ENST00000627685 USP47Q96K76 1375 aa10.91□□□□□ -0.66
TCF4-260ENST00000627685 FAM83GA6ND36 823 aa10.91□□□□□ -0.66
TCF4-260ENST00000627685 CABP1Q9NZU7 370 aa10.91□□□□□ -0.66
TCF4-260ENST00000627685 EVC2Q86UK5 1308 aa10.9□□□□□ -0.66
TCF4-260ENST00000627685 FOSBP53539 338 aa10.9□□□□□ -0.66
TCF4-260ENST00000627685 SRPK2P78362 688 aaKnown RBP10.9□□□□□ -0.66
TCF4-260ENST00000627685 POTEEQ6S8J3 1075 aa10.9□□□□□ -0.66
TCF4-260ENST00000627685 NGDNQ8NEJ9 315 aaKnown RBP10.9□□□□□ -0.66
TCF4-260ENST00000627685 TRPC5Q9UL62 973 aaPredicted RBP10.9□□□□□ -0.66
TCF4-260ENST00000627685 OVOS2A0A0J9YW53 1432 aa10.9□□□□□ -0.66
TCF4-260ENST00000627685 OVOS2Q6IE36 1432 aa10.9□□□□□ -0.66
TCF4-260ENST00000627685 A0A1W2PP64 1363 aa10.9□□□□□ -0.67
TCF4-260ENST00000627685 COL5A2P05997 1499 aaPredicted RBP10.89□□□□□ -0.67
TCF4-260ENST00000627685 PBX2P40425 430 aa10.89□□□□□ -0.67
TCF4-260ENST00000627685 ANKRD13DQ6ZTN6 518 aa10.89□□□□□ -0.67
TCF4-260ENST00000627685 UNC5CLQ8IV45 518 aa10.89□□□□□ -0.67
TCF4-260ENST00000627685 EP400Q96L91 3159 aa10.88□□□□□ -0.67
TCF4-260ENST00000627685 ST20-MTHFSA0A0A6YYL1 179 aa10.88□□□□□ -0.67
TCF4-260ENST00000627685 ARHGAP33O14559 1287 aa10.88□□□□□ -0.67
TCF4-260ENST00000627685 VPS72Q15906 364 aa10.88□□□□□ -0.67
TCF4-260ENST00000627685 SPNS2Q8IVW8 549 aa10.88□□□□□ -0.67
TCF4-260ENST00000627685 USP31Q70CQ4 1352 aa10.88□□□□□ -0.67
TCF4-260ENST00000627685 TTC21BQ7Z4L5 1316 aa10.87□□□□□ -0.67
TCF4-260ENST00000627685 BRWD3Q6RI45 1802 aa10.87□□□□□ -0.67
TCF4-260ENST00000627685 ONECUT3O60422 494 aaPredicted RBP10.87□□□□□ -0.67
TCF4-260ENST00000627685 NUTM2GQ5VZR2 741 aa10.87□□□□□ -0.67
TCF4-260ENST00000627685 GJD4Q96KN9 370 aaPredicted RBP10.87□□□□□ -0.67
TCF4-260ENST00000627685 ABCC6O95255 1503 aa10.86□□□□□ -0.67
TCF4-260ENST00000627685 PSEN2P49810 448 aa10.86□□□□□ -0.67
TCF4-260ENST00000627685 LSM11P83369 360 aaKnown RBP eCLIP10.86□□□□□ -0.67
TCF4-260ENST00000627685 PUS7Q96PZ0 661 aaKnown RBP10.86□□□□□ -0.67
TCF4-260ENST00000627685 TIMELESSQ9UNS1 1208 aa10.86□□□□□ -0.67
TCF4-260ENST00000627685 EDC4Q6P2E9 1401 aaKnown RBP10.85□□□□□ -0.67
TCF4-260ENST00000627685 SPDYE16A6NNV3 312 aaPredicted RBP10.85□□□□□ -0.67
TCF4-260ENST00000627685 PDIA6Q15084 440 aa10.85□□□□□ -0.67
TCF4-260ENST00000627685 DDX12PQ92771 950 aa10.85□□□□□ -0.67
TCF4-260ENST00000627685 ZDHHC16Q969W1 377 aa10.85□□□□□ -0.67
TCF4-260ENST00000627685 KCNK17Q96T54 332 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms