RNA–Protein interactions for RNA: ENST00000625990.2

CHD2-206, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-206ENST00000625990 PDGFDQ9GZP0 370 aaPredicted RBP12.49□□□□□ -0.41
CHD2-206ENST00000625990 GGNBP2Q9H3C7 697 aa12.49□□□□□ -0.41
CHD2-206ENST00000625990 ANO8Q9HCE9 1232 aaPredicted RBP12.49□□□□□ -0.41
CHD2-206ENST00000625990 NUBP1P53384 320 aa12.48□□□□□ -0.41
CHD2-206ENST00000625990 RRS1Q15050 365 aaKnown RBP12.48□□□□□ -0.41
CHD2-206ENST00000625990 TERF2IPQ9NYB0 399 aa12.48□□□□□ -0.41
CHD2-206ENST00000625990 SBF2Q86WG5 1849 aa12.48□□□□□ -0.41
CHD2-206ENST00000625990 MAP3K19Q56UN5 1328 aa12.47□□□□□ -0.41
CHD2-206ENST00000625990 USHBP1Q8N6Y0 703 aa12.47□□□□□ -0.41
CHD2-206ENST00000625990 POLR3GLQ9BT43 218 aa12.47□□□□□ -0.41
CHD2-206ENST00000625990 FARP1Q9Y4F1 1045 aaPredicted RBP12.47□□□□□ -0.41
CHD2-206ENST00000625990 RGPD2P0DJD1 1756 aa12.46□□□□□ -0.41
CHD2-206ENST00000625990 MYOM1P52179 1685 aa12.45□□□□□ -0.42
CHD2-206ENST00000625990 LRP5O75197 1615 aa12.45□□□□□ -0.42
CHD2-206ENST00000625990 CARD14Q9BXL6 1004 aa12.45□□□□□ -0.42
CHD2-206ENST00000625990 TNS2Q63HR2 1409 aa12.45□□□□□ -0.42
CHD2-206ENST00000625990 ANKRD36BQ8N2N9 1353 aa12.44□□□□□ -0.42
CHD2-206ENST00000625990 TMF1P82094 1093 aa12.44□□□□□ -0.42
CHD2-206ENST00000625990 EXOC5O00471 708 aa12.43□□□□□ -0.42
CHD2-206ENST00000625990 FYB1O15117 783 aa12.43□□□□□ -0.42
CHD2-206ENST00000625990 HOXC9P31274 260 aa12.43□□□□□ -0.42
CHD2-206ENST00000625990 COG3Q96JB2 828 aa12.43□□□□□ -0.42
CHD2-206ENST00000625990 CCDC7Q96M83 1385 aa12.43□□□□□ -0.42
CHD2-206ENST00000625990 IL2RBP14784 551 aa12.42□□□□□ -0.42
CHD2-206ENST00000625990 AMPHP49418 695 aa12.42□□□□□ -0.42
CHD2-206ENST00000625990 KCNQ4P56696 695 aa12.42□□□□□ -0.42
CHD2-206ENST00000625990 DDX54Q8TDD1 881 aaKnown RBP12.42□□□□□ -0.42
CHD2-206ENST00000625990 IP6K1Q92551 441 aa12.42□□□□□ -0.42
CHD2-206ENST00000625990 NSD3Q9BZ95 1437 aa12.42□□□□□ -0.42
CHD2-206ENST00000625990 MEGF6O75095 1541 aa12.42□□□□□ -0.42
CHD2-206ENST00000625990 ABCC6O95255 1503 aa12.42□□□□□ -0.42
CHD2-206ENST00000625990 FAM208AQ9UK61 1670 aaKnown RBP12.42□□□□□ -0.42
CHD2-206ENST00000625990 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
CHD2-206ENST00000625990 HSP90AB2PQ58FF8 381 aa12.4□□□□□ -0.42
CHD2-206ENST00000625990 NBPF6Q5VWK0 638 aa12.4□□□□□ -0.42
CHD2-206ENST00000625990 CCER1Q8TC90 406 aaPredicted RBP12.4□□□□□ -0.42
CHD2-206ENST00000625990 NBPF4Q96M43 638 aa12.4□□□□□ -0.42
CHD2-206ENST00000625990 PUS7Q96PZ0 661 aaKnown RBP12.4□□□□□ -0.42
CHD2-206ENST00000625990 EMILIN1Q9Y6C2 1016 aa12.4□□□□□ -0.42
CHD2-206ENST00000625990 KIF20BQ96Q89 1820 aa12.39□□□□□ -0.43
CHD2-206ENST00000625990 NHSQ6T4R5 1651 aa12.39□□□□□ -0.43
CHD2-206ENST00000625990 ZBTB7AO95365 584 aa12.39□□□□□ -0.43
CHD2-206ENST00000625990 TXNRD1Q16881 649 aa12.39□□□□□ -0.43
CHD2-206ENST00000625990 RASEFQ8IZ41 740 aa12.39□□□□□ -0.43
CHD2-206ENST00000625990 PARD3Q8TEW0 1356 aa12.39□□□□□ -0.43
CHD2-206ENST00000625990 NINLQ9Y2I6 1382 aa12.39□□□□□ -0.43
CHD2-206ENST00000625990 SHANK3Q9BYB0 1731 aa12.39□□□□□ -0.43
CHD2-206ENST00000625990 C11orf95C9JLR9 678 aaPredicted RBP12.38□□□□□ -0.43
CHD2-206ENST00000625990 HSPA5P11021 654 aaKnown RBP12.38□□□□□ -0.43
CHD2-206ENST00000625990 CDCA7Q9BWT1 371 aaPredicted RBP12.38□□□□□ -0.43
CHD2-206ENST00000625990 CIZ1Q9ULV3 898 aaPredicted RBP12.38□□□□□ -0.43
CHD2-206ENST00000625990 BTAF1O14981 1849 aa12.37□□□□□ -0.43
CHD2-206ENST00000625990 PPM1GO15355 546 aaPredicted RBP12.37□□□□□ -0.43
CHD2-206ENST00000625990 TNNT2P45379 298 aaPredicted RBP12.37□□□□□ -0.43
CHD2-206ENST00000625990 NBPF14Q5TI25 921 aa12.37□□□□□ -0.43
CHD2-206ENST00000625990 SYTL4Q96C24 671 aaPredicted RBP12.37□□□□□ -0.43
CHD2-206ENST00000625990 CASZ1Q86V15 1759 aa12.36□□□□□ -0.43
CHD2-206ENST00000625990 PLSCR1O15162 318 aa12.36□□□□□ -0.43
CHD2-206ENST00000625990 ZNF827Q17R98 1081 aa12.36□□□□□ -0.43
CHD2-206ENST00000625990 FAM212AQ96EL1 285 aa12.36□□□□□ -0.43
CHD2-206ENST00000625990 LRRC4BQ9NT99 713 aa12.36□□□□□ -0.43
CHD2-206ENST00000625990 DOT1LQ8TEK3 1739 aa12.36□□□□□ -0.43
CHD2-206ENST00000625990 BCL9O00512 1426 aa12.36□□□□□ -0.43
CHD2-206ENST00000625990 RGPD3A6NKT7 1758 aaPredicted RBP12.35□□□□□ -0.43
CHD2-206ENST00000625990 RGPD4Q7Z3J3 1758 aa12.35□□□□□ -0.43
CHD2-206ENST00000625990 GSE1Q14687 1217 aa12.35□□□□□ -0.43
CHD2-206ENST00000625990 NSD2O96028 1365 aa12.34□□□□□ -0.43
CHD2-206ENST00000625990 PRIM1P49642 420 aaKnown RBP12.34□□□□□ -0.43
CHD2-206ENST00000625990 PAPPAQ13219 1627 aa12.33□□□□□ -0.43
CHD2-206ENST00000625990 RTL1A6NKG5 1358 aa12.32□□□□□ -0.44
CHD2-206ENST00000625990 DCAF8Q5TAQ9 597 aa12.32□□□□□ -0.44
CHD2-206ENST00000625990 ZCRB1Q8TBF4 217 aaKnown RBP12.32□□□□□ -0.44
CHD2-206ENST00000625990 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
CHD2-206ENST00000625990 ECM2O94769 699 aaPredicted RBP12.31□□□□□ -0.44
CHD2-206ENST00000625990 SLC15A2Q16348 729 aa12.31□□□□□ -0.44
CHD2-206ENST00000625990 SMIM5Q71RC9 77 aa12.31□□□□□ -0.44
CHD2-206ENST00000625990 SPON1Q9HCB6 807 aa12.31□□□□□ -0.44
CHD2-206ENST00000625990 STK32BQ9NY57 414 aa12.31□□□□□ -0.44
CHD2-206ENST00000625990 PPP1R1BQ9UD71 204 aaPredicted RBP12.31□□□□□ -0.44
CHD2-206ENST00000625990 PTGER2P43116 358 aa12.3□□□□□ -0.44
CHD2-206ENST00000625990 PANK3Q9H999 370 aa12.3□□□□□ -0.44
CHD2-206ENST00000625990 TOGARAM1Q9Y4F4 1720 aa12.3□□□□□ -0.44
CHD2-206ENST00000625990 INSRP06213 1382 aa12.3□□□□□ -0.44
CHD2-206ENST00000625990 FLT4P35916 1363 aa12.3□□□□□ -0.44
CHD2-206ENST00000625990 EIF4G2P78344 907 aaKnown RBP eCLIP12.29□□□□□ -0.44
CHD2-206ENST00000625990 CNGB1Q14028 1251 aaPredicted RBP12.29□□□□□ -0.44
CHD2-206ENST00000625990 CDCA8Q53HL2 280 aa12.29□□□□□ -0.44
CHD2-206ENST00000625990 CLSPNQ9HAW4 1339 aa12.29□□□□□ -0.44
CHD2-206ENST00000625990 TUBGCP6Q96RT7 1819 aa12.28□□□□□ -0.44
CHD2-206ENST00000625990 CYP27B1O15528 508 aa12.28□□□□□ -0.44
CHD2-206ENST00000625990 POLKQ9UBT6 870 aa12.28□□□□□ -0.44
CHD2-206ENST00000625990 TIMELESSQ9UNS1 1208 aa12.28□□□□□ -0.44
CHD2-206ENST00000625990 SMG6Q86US8 1419 aaKnown RBP12.28□□□□□ -0.44
CHD2-206ENST00000625990 TATP17735 454 aaPredicted RBP12.27□□□□□ -0.45
CHD2-206ENST00000625990 RAPGEF4Q8WZA2 1011 aa12.27□□□□□ -0.45
CHD2-206ENST00000625990 EYA1Q99502 592 aa12.27□□□□□ -0.45
CHD2-206ENST00000625990 UTRNP46939 3433 aa12.27□□□□□ -0.45
CHD2-206ENST00000625990 ANKRD26Q9UPS8 1709 aa12.26□□□□□ -0.45
CHD2-206ENST00000625990 EIF4A2Q14240 407 aaKnown RBP12.26□□□□□ -0.45
CHD2-206ENST00000625990 MPRIPQ6WCQ1 1025 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms