RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 ATF7IPQ6VMQ6 1270 aa14.15□□□□□ -0.14
CHD2-205ENST00000625662 USHBP1Q8N6Y0 703 aa14.15□□□□□ -0.14
CHD2-205ENST00000625662 DNAJC2Q99543 621 aaKnown RBP14.15□□□□□ -0.14
CHD2-205ENST00000625662 TFCP2L1Q9NZI6 479 aa14.15□□□□□ -0.14
CHD2-205ENST00000625662 DRC7Q8IY82 874 aa14.15□□□□□ -0.14
CHD2-205ENST00000625662 USP21Q9UK80 565 aa14.15□□□□□ -0.14
CHD2-205ENST00000625662 TTLL12Q14166 644 aaPredicted RBP14.14□□□□□ -0.15
CHD2-205ENST00000625662 PCDH11XQ9BZA7 1347 aa14.14□□□□□ -0.15
CHD2-205ENST00000625662 PCDH11YQ9BZA8 1340 aa14.14□□□□□ -0.15
CHD2-205ENST00000625662 KRI1Q8N9T8 703 aaKnown RBP14.14□□□□□ -0.15
CHD2-205ENST00000625662 GCC1Q96CN9 775 aa14.14□□□□□ -0.15
CHD2-205ENST00000625662 CHD1O14646 1710 aa14.14□□□□□ -0.15
CHD2-205ENST00000625662 ATP6V1AP38606 617 aa14.14□□□□□ -0.15
CHD2-205ENST00000625662 ZNF622Q969S3 477 aaKnown RBP eCLIP14.14□□□□□ -0.154e-8■■□□□ 11.8
CHD2-205ENST00000625662 RTCBQ9Y3I0 505 aaKnown RBP14.14□□□□□ -0.15
CHD2-205ENST00000625662 ANKRD18BA2A2Z9 1011 aa14.14□□□□□ -0.15
CHD2-205ENST00000625662 MYO1BO43795 1136 aa14.14□□□□□ -0.15
CHD2-205ENST00000625662 TMPOP42166 694 aaKnown RBP14.14□□□□□ -0.15
CHD2-205ENST00000625662 RAI14Q9P0K7 980 aa14.14□□□□□ -0.15
CHD2-205ENST00000625662 NBPF6Q5VWK0 638 aa14.13□□□□□ -0.15
CHD2-205ENST00000625662 NBPF5PQ86XG9 351 aaPredicted RBP14.13□□□□□ -0.15
CHD2-205ENST00000625662 NBPF4Q96M43 638 aa14.13□□□□□ -0.15
CHD2-205ENST00000625662 IFIT5Q13325 482 aaKnown RBP14.13□□□□□ -0.15
CHD2-205ENST00000625662 METTL24Q5JXM2 366 aa14.13□□□□□ -0.15
CHD2-205ENST00000625662 KDM6BO15054 1643 aa14.13□□□□□ -0.15
CHD2-205ENST00000625662 SLC5A1P13866 664 aa14.13□□□□□ -0.15
CHD2-205ENST00000625662 SETDB2Q96T68 719 aa14.13□□□□□ -0.15
CHD2-205ENST00000625662 EMILIN1Q9Y6C2 1016 aa14.13□□□□□ -0.15
CHD2-205ENST00000625662 NPHP4O75161 1426 aaPredicted RBP14.13□□□□□ -0.15
CHD2-205ENST00000625662 LDHCP07864 332 aa14.13□□□□□ -0.15
CHD2-205ENST00000625662 PHF14O94880 888 aa14.12□□□□□ -0.15
CHD2-205ENST00000625662 DUSP27Q5VZP5 1158 aa14.12□□□□□ -0.15
CHD2-205ENST00000625662 SIRT1Q96EB6 747 aa14.12□□□□□ -0.15
CHD2-205ENST00000625662 HDAC9Q9UKV0 1011 aa14.12□□□□□ -0.15
CHD2-205ENST00000625662 FLT4P35916 1363 aa14.12□□□□□ -0.15
CHD2-205ENST00000625662 BTG4Q9NY30 223 aa14.12□□□□□ -0.15
CHD2-205ENST00000625662 YTHDC2Q9H6S0 1430 aaKnown RBP14.12□□□□□ -0.15
CHD2-205ENST00000625662 TPD52L1Q16890 204 aaPredicted RBP14.12□□□□□ -0.15
CHD2-205ENST00000625662 MAST1Q9Y2H9 1570 aa14.12□□□□□ -0.15
CHD2-205ENST00000625662 LRP2BPQ9P2M1 347 aa14.12□□□□□ -0.15
CHD2-205ENST00000625662 NLRP1Q9C000 1473 aa14.12□□□□□ -0.15
CHD2-205ENST00000625662 YEATS2Q9ULM3 1422 aa14.11□□□□□ -0.15
CHD2-205ENST00000625662 DNTTIP2Q5QJE6 756 aaKnown RBP14.11□□□□□ -0.15
CHD2-205ENST00000625662 CRBNQ96SW2 442 aa14.11□□□□□ -0.15
CHD2-205ENST00000625662 PDE3AQ14432 1141 aa14.11□□□□□ -0.15
CHD2-205ENST00000625662 AKAP4Q5JQC9 854 aa14.11□□□□□ -0.15
CHD2-205ENST00000625662 CTNNA3Q9UI47 895 aa14.11□□□□□ -0.15
CHD2-205ENST00000625662 TRPC5Q9UL62 973 aaPredicted RBP14.11□□□□□ -0.15
CHD2-205ENST00000625662 C6orf229H3BNL8 230 aa14.11□□□□□ -0.15
CHD2-205ENST00000625662 GCP02774 474 aa14.11□□□□□ -0.15
CHD2-205ENST00000625662 NOL8Q76FK4 1167 aaKnown RBP14.11□□□□□ -0.15
CHD2-205ENST00000625662 FLAD1Q8NFF5 587 aa14.1□□□□□ -0.15
CHD2-205ENST00000625662 PIK3C2GO75747 1445 aa14.1□□□□□ -0.15
CHD2-205ENST00000625662 NF2P35240 595 aa14.1□□□□□ -0.15
CHD2-205ENST00000625662 ABCC1P33527 1531 aa14.1□□□□□ -0.15
CHD2-205ENST00000625662 CFAP43Q8NDM7 1665 aa14.1□□□□□ -0.15
CHD2-205ENST00000625662 MYO5CQ9NQX4 1742 aa14.1□□□□□ -0.15
CHD2-205ENST00000625662 ATP2B2Q01814 1243 aa14.1□□□□□ -0.15
CHD2-205ENST00000625662 SPTY2D1Q68D10 685 aaPredicted RBP14.1□□□□□ -0.15
CHD2-205ENST00000625662 MCTP1Q6DN14 999 aa14.1□□□□□ -0.15
CHD2-205ENST00000625662 NPATQ14207 1427 aa14.09□□□□□ -0.15
CHD2-205ENST00000625662 CRACR2BQ8N4Y2 399 aaPredicted RBP14.09□□□□□ -0.15
CHD2-205ENST00000625662 LRRCC1Q9C099 1032 aa14.09□□□□□ -0.15
CHD2-205ENST00000625662 CDC45O75419 566 aa14.09□□□□□ -0.15
CHD2-205ENST00000625662 CCDC152Q4G0S7 254 aa14.09□□□□□ -0.15
CHD2-205ENST00000625662 ANKRD20A12PQ8NF67 263 aa14.09□□□□□ -0.15
CHD2-205ENST00000625662 MYD88Q99836 296 aa14.09□□□□□ -0.15
CHD2-205ENST00000625662 MLH3Q9UHC1 1453 aa14.08□□□□□ -0.15
CHD2-205ENST00000625662 SAMD9Q5K651 1589 aa14.08□□□□□ -0.16
CHD2-205ENST00000625662 CWC25Q9NXE8 425 aaPredicted RBP14.08□□□□□ -0.16
CHD2-205ENST00000625662 NOP58Q9Y2X3 529 aaKnown RBP14.08□□□□□ -0.16
CHD2-205ENST00000625662 ABCA8O94911 1581 aa14.08□□□□□ -0.16
CHD2-205ENST00000625662 DZIP1Q86YF9 867 aaKnown RBP14.08□□□□□ -0.16
CHD2-205ENST00000625662 RPAP2Q8IXW5 612 aaPredicted RBP14.08□□□□□ -0.16
CHD2-205ENST00000625662 ACSBG1Q96GR2 724 aa14.08□□□□□ -0.16
CHD2-205ENST00000625662 DCAF5Q96JK2 942 aa14.08□□□□□ -0.16
CHD2-205ENST00000625662 JDP2Q8WYK2 163 aa14.08□□□□□ -0.16
CHD2-205ENST00000625662 TSR1Q2NL82 804 aaKnown RBP14.07□□□□□ -0.16
CHD2-205ENST00000625662 NLRP3Q96P20 1036 aa14.07□□□□□ -0.16
CHD2-205ENST00000625662 MAGI3Q5TCQ9 1506 aa14.07□□□□□ -0.16
CHD2-205ENST00000625662 TPTE2Q6XPS3 522 aa14.07□□□□□ -0.16
CHD2-205ENST00000625662 SRGAP3O43295 1099 aa14.07□□□□□ -0.16
CHD2-205ENST00000625662 ALDH1L2Q3SY69 923 aa14.07□□□□□ -0.16
CHD2-205ENST00000625662 MCM10Q7L590 875 aa14.07□□□□□ -0.16
CHD2-205ENST00000625662 EYA3Q99504 573 aa14.07□□□□□ -0.16
CHD2-205ENST00000625662 NOB1Q9ULX3 412 aaKnown RBP14.07□□□□□ -0.16
CHD2-205ENST00000625662 ADGRL2O95490 1459 aa14.06□□□□□ -0.16
CHD2-205ENST00000625662 FAM161AQ3B820 660 aa14.06□□□□□ -0.16
CHD2-205ENST00000625662 LMOD1P29536 600 aaPredicted RBP14.06□□□□□ -0.16
CHD2-205ENST00000625662 SOGA3Q5TF21 947 aa14.06□□□□□ -0.16
CHD2-205ENST00000625662 IP6K1Q92551 441 aa14.06□□□□□ -0.16
CHD2-205ENST00000625662 KDM5DQ9BY66 1539 aa14.06□□□□□ -0.16
CHD2-205ENST00000625662 MPHOSPH10O00566 681 aaKnown RBP14.06□□□□□ -0.16
CHD2-205ENST00000625662 RAB11FIP3O75154 756 aa14.06□□□□□ -0.16
CHD2-205ENST00000625662 RXRBP28702 533 aa14.06□□□□□ -0.16
CHD2-205ENST00000625662 TRAPPC3LQ5T215 181 aa14.06□□□□□ -0.16
CHD2-205ENST00000625662 DNAAF4Q8WXU2 420 aa14.06□□□□□ -0.16
CHD2-205ENST00000625662 TSR2Q969E8 191 aaKnown RBP14.06□□□□□ -0.16
CHD2-205ENST00000625662 DNMT1P26358 1616 aaKnown RBP14.05□□□□□ -0.16
CHD2-205ENST00000625662 TPM1P09493 284 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms