RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 ITGB4P16144 1822 aa10.54□□□□□ -0.72
LINC00963-218ENST00000624138 NSD2O96028 1365 aa10.53□□□□□ -0.72
LINC00963-218ENST00000624138 USP31Q70CQ4 1352 aa10.53□□□□□ -0.72
LINC00963-218ENST00000624138 CICQ96RK0 1608 aaPredicted RBP10.53□□□□□ -0.72
LINC00963-218ENST00000624138 ANKRD36BQ8N2N9 1353 aa10.52□□□□□ -0.72
LINC00963-218ENST00000624138 PRIM1P49642 420 aaKnown RBP10.52□□□□□ -0.73
LINC00963-218ENST00000624138 EVC2Q86UK5 1308 aa10.52□□□□□ -0.73
LINC00963-218ENST00000624138 BRCA1P38398 1863 aaKnown RBP10.51□□□□□ -0.73
LINC00963-218ENST00000624138 KIAA1551Q9HCM1 1747 aa10.51□□□□□ -0.73
LINC00963-218ENST00000624138 TOGARAM1Q9Y4F4 1720 aa10.51□□□□□ -0.73
LINC00963-218ENST00000624138 DDX54Q8TDD1 881 aaKnown RBP10.51□□□□□ -0.73
LINC00963-218ENST00000624138 ANKRD24Q8TF21 1146 aa10.51□□□□□ -0.73
LINC00963-218ENST00000624138 N4BP2Q86UW6 1770 aaPredicted RBP10.51□□□□□ -0.73
LINC00963-218ENST00000624138 KTN1Q86UP2 1357 aaKnown RBP10.51□□□□□ -0.73
LINC00963-218ENST00000624138 MSH5O43196 834 aa10.5□□□□□ -0.73
LINC00963-218ENST00000624138 MSL1Q68DK7 614 aa10.5□□□□□ -0.73
LINC00963-218ENST00000624138 CCNL1Q9UK58 526 aaPredicted RBP10.5□□□□□ -0.73
LINC00963-218ENST00000624138 SBF1O95248 1867 aa10.49□□□□□ -0.73
LINC00963-218ENST00000624138 TOMM70O94826 608 aa10.49□□□□□ -0.73
LINC00963-218ENST00000624138 COL13A1Q5TAT6 717 aaPredicted RBP10.49□□□□□ -0.73
LINC00963-218ENST00000624138 FLAD1Q8NFF5 587 aa10.49□□□□□ -0.73
LINC00963-218ENST00000624138 C4BP0C0L5 1744 aa10.49□□□□□ -0.73
LINC00963-218ENST00000624138 ARFGEF1Q9Y6D6 1849 aa10.49□□□□□ -0.73
LINC00963-218ENST00000624138 JMYQ8N9B5 988 aa10.48□□□□□ -0.73
LINC00963-218ENST00000624138 SYTL4Q96C24 671 aaPredicted RBP10.48□□□□□ -0.73
LINC00963-218ENST00000624138 MAP2P11137 1827 aaKnown RBP10.48□□□□□ -0.73
LINC00963-218ENST00000624138 IGSF1Q8N6C5 1336 aa10.48□□□□□ -0.73
LINC00963-218ENST00000624138 HMGB2P26583 209 aaKnown RBP10.47□□□□□ -0.73
LINC00963-218ENST00000624138 PRELPP51888 382 aa10.47□□□□□ -0.73
LINC00963-218ENST00000624138 USP47Q96K76 1375 aa10.47□□□□□ -0.73
LINC00963-218ENST00000624138 PCNTO95613 3336 aa10.47□□□□□ -0.73
LINC00963-218ENST00000624138 IP6K1Q92551 441 aa10.46□□□□□ -0.73
LINC00963-218ENST00000624138 KLRG1Q96E93 195 aa10.46□□□□□ -0.73
LINC00963-218ENST00000624138 CD163L1Q9NR16 1453 aa10.46□□□□□ -0.74
LINC00963-218ENST00000624138 PKD1L3Q7Z443 1732 aa10.46□□□□□ -0.74
LINC00963-218ENST00000624138 SBNO2Q9Y2G9 1366 aa10.45□□□□□ -0.74
LINC00963-218ENST00000624138 NME9Q86XW9 330 aa10.45□□□□□ -0.74
LINC00963-218ENST00000624138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.45□□□□□ -0.74
LINC00963-218ENST00000624138 ZCRB1Q8TBF4 217 aaKnown RBP10.45□□□□□ -0.74
LINC00963-218ENST00000624138 RBM46Q8TBY0 533 aaKnown RBP10.44□□□□□ -0.74
LINC00963-218ENST00000624138 CCDC88AQ3V6T2 1871 aa10.44□□□□□ -0.74
LINC00963-218ENST00000624138 CAPN15O75808 1086 aa10.43□□□□□ -0.74
LINC00963-218ENST00000624138 TNRC6CQ9HCJ0 1690 aaKnown RBP10.43□□□□□ -0.74
LINC00963-218ENST00000624138 MEGF6O75095 1541 aa10.43□□□□□ -0.74
LINC00963-218ENST00000624138 TNS4Q8IZW8 715 aa10.42□□□□□ -0.74
LINC00963-218ENST00000624138 WWC3Q9ULE0 1092 aa10.42□□□□□ -0.74
LINC00963-218ENST00000624138 FSTL1Q12841 308 aa10.41□□□□□ -0.74
LINC00963-218ENST00000624138 AMIGO3Q86WK7 504 aa10.41□□□□□ -0.74
LINC00963-218ENST00000624138 LTV1Q96GA3 475 aaPredicted RBP10.41□□□□□ -0.74
LINC00963-218ENST00000624138 NMRK2Q9NPI5 230 aa10.41□□□□□ -0.74
LINC00963-218ENST00000624138 EDC4Q6P2E9 1401 aaKnown RBP10.41□□□□□ -0.74
LINC00963-218ENST00000624138 CGNL1Q0VF96 1302 aa10.4□□□□□ -0.74
LINC00963-218ENST00000624138 HTRA3P83110 453 aa10.4□□□□□ -0.74
LINC00963-218ENST00000624138 PXDNLA1KZ92 1463 aa10.4□□□□□ -0.74
LINC00963-218ENST00000624138 NSD3Q9BZ95 1437 aa10.4□□□□□ -0.75
LINC00963-218ENST00000624138 PALLDQ8WX93 1383 aa10.39□□□□□ -0.75
LINC00963-218ENST00000624138 HOXC9P31274 260 aa10.39□□□□□ -0.75
LINC00963-218ENST00000624138 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.38□□□□□ -0.75
LINC00963-218ENST00000624138 SSFA2P28290 1259 aa10.38□□□□□ -0.75
LINC00963-218ENST00000624138 TGFB2P61812 414 aa10.38□□□□□ -0.75
LINC00963-218ENST00000624138 SMIM5Q71RC9 77 aa10.38□□□□□ -0.75
LINC00963-218ENST00000624138 HDGFL2Q7Z4V5 671 aaPredicted RBP10.38□□□□□ -0.75
LINC00963-218ENST00000624138 AK7Q96M32 723 aa10.38□□□□□ -0.75
LINC00963-218ENST00000624138 C10orf71Q711Q0 1435 aa10.38□□□□□ -0.75
LINC00963-218ENST00000624138 MAP3K19Q56UN5 1328 aa10.37□□□□□ -0.75
LINC00963-218ENST00000624138 C4AP0C0L4 1744 aa10.37□□□□□ -0.75
LINC00963-218ENST00000624138 C16orf71Q8IYS4 520 aaPredicted RBP10.37□□□□□ -0.75
LINC00963-218ENST00000624138 SMARCC1Q92922 1105 aaPredicted RBP10.37□□□□□ -0.75
LINC00963-218ENST00000624138 MYH14Q7Z406 1995 aaKnown RBP10.37□□□□□ -0.75
LINC00963-218ENST00000624138 ZNF831Q5JPB2 1677 aa10.37□□□□□ -0.75
LINC00963-218ENST00000624138 PLEKHG2Q9H7P9 1386 aa10.37□□□□□ -0.75
LINC00963-218ENST00000624138 PHF14O94880 888 aa10.36□□□□□ -0.75
LINC00963-218ENST00000624138 NBPF6Q5VWK0 638 aa10.36□□□□□ -0.75
LINC00963-218ENST00000624138 MPRIPQ6WCQ1 1025 aa10.36□□□□□ -0.75
LINC00963-218ENST00000624138 ARHGAP27Q6ZUM4 889 aa10.36□□□□□ -0.75
LINC00963-218ENST00000624138 L3MBTL2Q969R5 705 aa10.36□□□□□ -0.75
LINC00963-218ENST00000624138 NBPF4Q96M43 638 aa10.36□□□□□ -0.75
LINC00963-218ENST00000624138 SLC12A5Q9H2X9 1139 aa10.36□□□□□ -0.75
LINC00963-218ENST00000624138 BCS1LQ9Y276 419 aa10.36□□□□□ -0.75
LINC00963-218ENST00000624138 A0A1W2PP64 1363 aa10.36□□□□□ -0.75
LINC00963-218ENST00000624138 COL5A3P25940 1745 aaPredicted RBP10.36□□□□□ -0.75
LINC00963-218ENST00000624138 KCPQ6ZWJ8 1503 aa10.35□□□□□ -0.75
LINC00963-218ENST00000624138 SLC34A2O95436 690 aa10.35□□□□□ -0.75
LINC00963-218ENST00000624138 AMPHP49418 695 aa10.35□□□□□ -0.75
LINC00963-218ENST00000624138 TMC1Q8TDI8 760 aa10.35□□□□□ -0.75
LINC00963-218ENST00000624138 ROCK2O75116 1388 aaKnown RBP10.35□□□□□ -0.75
LINC00963-218ENST00000624138 PCDH11XQ9BZA7 1347 aa10.34□□□□□ -0.75
LINC00963-218ENST00000624138 PCDH11YQ9BZA8 1340 aa10.34□□□□□ -0.75
LINC00963-218ENST00000624138 A0A0G2JLW4 131 aa10.34□□□□□ -0.75
LINC00963-218ENST00000624138 MMP10P09238 476 aa10.34□□□□□ -0.75
LINC00963-218ENST00000624138 TATP17735 454 aaPredicted RBP10.34□□□□□ -0.75
LINC00963-218ENST00000624138 FBLN1P23142 703 aa10.34□□□□□ -0.75
LINC00963-218ENST00000624138 C9orf131Q5VYM1 1079 aa10.34□□□□□ -0.75
LINC00963-218ENST00000624138 LINC00116Q8NCU8 138 aa10.34□□□□□ -0.75
LINC00963-218ENST00000624138 RAPGEF4Q8WZA2 1011 aa10.34□□□□□ -0.75
LINC00963-218ENST00000624138 TERF2IPQ9NYB0 399 aa10.34□□□□□ -0.75
LINC00963-218ENST00000624138 RTL1A6NKG5 1358 aa10.34□□□□□ -0.75
LINC00963-218ENST00000624138 DICER1Q9UPY3 1922 aaKnown RBP10.34□□□□□ -0.75
LINC00963-218ENST00000624138 KDM2BQ8NHM5 1336 aa10.33□□□□□ -0.76
LINC00963-218ENST00000624138 CYP27B1O15528 508 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms