RNA–Protein interactions for RNA: ENST00000623650.3

SNHG5-217, Transcript of small nucleolar RNA host gene 5, human

TSL 5

Gene SNHG5, Length 886 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-217	ENST00000623650	ZNF687	Q8N1G0	1237 aa		11.32	□□□□□ -0.6
SNHG5-217	ENST00000623650	TBC1D2	Q9BYX2	928 aa		11.32	□□□□□ -0.6
SNHG5-217	ENST00000623650	NPHP4	O75161	1426 aa	Predicted RBP	11.32	□□□□□ -0.6
SNHG5-217	ENST00000623650	DIP2A	Q14689	1571 aa		11.32	□□□□□ -0.6
SNHG5-217	ENST00000623650	MYO5B	Q9ULV0	1848 aa		11.31	□□□□□ -0.6
SNHG5-217	ENST00000623650	CFAP70	Q5T0N1	1121 aa		11.31	□□□□□ -0.6
SNHG5-217	ENST00000623650	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.31	□□□□□ -0.6
SNHG5-217	ENST00000623650	C14orf93	Q9H972	538 aa	Known RBP	11.31	□□□□□ -0.6
SNHG5-217	ENST00000623650	POGK	Q9P215	609 aa		11.31	□□□□□ -0.6
SNHG5-217	ENST00000623650	IFT172	Q9UG01	1749 aa		11.31	□□□□□ -0.6
SNHG5-217	ENST00000623650	NRXN1	Q9ULB1	1477 aa		11.31	□□□□□ -0.6
SNHG5-217	ENST00000623650	CD46	P15529	392 aa		11.3	□□□□□ -0.6
SNHG5-217	ENST00000623650	TMEM134	Q9H6X4	195 aa		11.3	□□□□□ -0.6
SNHG5-217	ENST00000623650	USP47	Q96K76	1375 aa		11.29	□□□□□ -0.6
SNHG5-217	ENST00000623650	KIAA1210	Q9ULL0	1709 aa		11.29	□□□□□ -0.6
SNHG5-217	ENST00000623650	NBPF8	Q3BBV2	869 aa		11.29	□□□□□ -0.6
SNHG5-217	ENST00000623650	ZBED2	Q9BTP6	218 aa		11.29	□□□□□ -0.6
SNHG5-217	ENST00000623650	STK26	Q9P289	416 aa		11.29	□□□□□ -0.6
SNHG5-217	ENST00000623650	SETBP1	Q9Y6X0	1596 aa		11.28	□□□□□ -0.6
SNHG5-217	ENST00000623650	DDX11L8	A8MPP1	907 aa		11.28	□□□□□ -0.6
SNHG5-217	ENST00000623650	SMAP	O00193	183 aa		11.28	□□□□□ -0.6
SNHG5-217	ENST00000623650	LTK	P29376	864 aa		11.28	□□□□□ -0.6
SNHG5-217	ENST00000623650	CLK2	P49760	499 aa	Known RBP	11.28	□□□□□ -0.6
SNHG5-217	ENST00000623650	CDCA8	Q53HL2	280 aa		11.28	□□□□□ -0.6
SNHG5-217	ENST00000623650	SLC26A8	Q96RN1	970 aa		11.28	□□□□□ -0.6
SNHG5-217	ENST00000623650	KIAA1468	Q9P260	1216 aa		11.28	□□□□□ -0.6
SNHG5-217	ENST00000623650	TBX22	Q9Y458	520 aa		11.28	□□□□□ -0.6
SNHG5-217	ENST00000623650	PIK3R4	Q99570	1358 aa		11.28	□□□□□ -0.6
SNHG5-217	ENST00000623650	TRPM1	Q7Z4N2	1603 aa		11.27	□□□□□ -0.6
SNHG5-217	ENST00000623650	POLR1A	O95602	1720 aa	Predicted RBP	11.27	□□□□□ -0.61
SNHG5-217	ENST00000623650	PSEN2	P49810	448 aa		11.27	□□□□□ -0.61
SNHG5-217	ENST00000623650	ARX	Q96QS3	562 aa		11.27	□□□□□ -0.61
SNHG5-217	ENST00000623650	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
SNHG5-217	ENST00000623650	TRAK1	Q9UPV9	953 aa		11.27	□□□□□ -0.61
SNHG5-217	ENST00000623650	ALK	Q9UM73	1620 aa		11.27	□□□□□ -0.61
SNHG5-217	ENST00000623650	GPRASP1	Q5JY77	1395 aa		11.27	□□□□□ -0.61
SNHG5-217	ENST00000623650	STRC	Q7RTU9	1775 aa		11.26	□□□□□ -0.61
SNHG5-217	ENST00000623650	SPIRE2	Q8WWL2	714 aa		11.26	□□□□□ -0.61
SNHG5-217	ENST00000623650	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.26	□□□□□ -0.61
SNHG5-217	ENST00000623650	IQGAP1	P46940	1657 aa		11.25	□□□□□ -0.61
SNHG5-217	ENST00000623650	ARHGAP33	O14559	1287 aa		11.25	□□□□□ -0.61
SNHG5-217	ENST00000623650	TMF1	P82094	1093 aa		11.25	□□□□□ -0.61
SNHG5-217	ENST00000623650	NBPF1	Q3BBV0	1214 aa		11.25	□□□□□ -0.61
SNHG5-217	ENST00000623650	TMEM132E	Q6IEE7	984 aa		11.25	□□□□□ -0.61
SNHG5-217	ENST00000623650	LRPPRC	P42704	1394 aa	Known RBP	11.25	□□□□□ -0.61
SNHG5-217	ENST00000623650	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.25	□□□□□ -0.61
SNHG5-217	ENST00000623650	MED14	O60244	1454 aa		11.25	□□□□□ -0.61
SNHG5-217	ENST00000623650	HSPA5	P11021	654 aa	Known RBP	11.24	□□□□□ -0.61
SNHG5-217	ENST00000623650	NUTM1	Q86Y26	1132 aa		11.24	□□□□□ -0.61
SNHG5-217	ENST00000623650	POLR3GL	Q9BT43	218 aa		11.24	□□□□□ -0.61
SNHG5-217	ENST00000623650	RIC3	Q7Z5B4	369 aa		11.23	□□□□□ -0.61
SNHG5-217	ENST00000623650	FBXO41	Q8TF61	875 aa		11.23	□□□□□ -0.61
SNHG5-217	ENST00000623650	SLC4A5	Q9BY07	1137 aa		11.23	□□□□□ -0.61
SNHG5-217	ENST00000623650	RABGEF1	Q9UJ41	708 aa		11.23	□□□□□ -0.61
SNHG5-217	ENST00000623650	MCM6	Q14566	821 aa		11.22	□□□□□ -0.61
SNHG5-217	ENST00000623650	LIMD1	Q9UGP4	676 aa		11.22	□□□□□ -0.61
SNHG5-217	ENST00000623650	AMOTL2	Q9Y2J4	779 aa		11.22	□□□□□ -0.61
SNHG5-217	ENST00000623650	ADAMTS13	Q76LX8	1427 aa		11.21	□□□□□ -0.61
SNHG5-217	ENST00000623650	ABCC11	Q96J66	1382 aa		11.21	□□□□□ -0.61
SNHG5-217	ENST00000623650	EVC2	Q86UK5	1308 aa		11.21	□□□□□ -0.61
SNHG5-217	ENST00000623650	ST20-MTHFS	A0A0A6YYL1	179 aa		11.21	□□□□□ -0.61
SNHG5-217	ENST00000623650	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
SNHG5-217	ENST00000623650	POTEE	Q6S8J3	1075 aa		11.21	□□□□□ -0.61
SNHG5-217	ENST00000623650	RDH13	Q8NBN7	331 aa		11.21	□□□□□ -0.61
SNHG5-217	ENST00000623650	PRAM1	Q96QH2	718 aa		11.21	□□□□□ -0.61
SNHG5-217	ENST00000623650	MET	P08581	1390 aa		11.2	□□□□□ -0.62
SNHG5-217	ENST00000623650	SPTLC1	O15269	473 aa		11.2	□□□□□ -0.62
SNHG5-217	ENST00000623650	KCNA6	P17658	529 aa		11.2	□□□□□ -0.62
SNHG5-217	ENST00000623650	PBX2	P40425	430 aa		11.2	□□□□□ -0.62
SNHG5-217	ENST00000623650	TUSC1	Q2TAM9	212 aa		11.2	□□□□□ -0.62
SNHG5-217	ENST00000623650	ADGRB1	O14514	1584 aa		11.2	□□□□□ -0.62
SNHG5-217	ENST00000623650	DLC1	Q96QB1	1528 aa		11.19	□□□□□ -0.62
SNHG5-217	ENST00000623650	PTCH1	Q13635	1447 aa		11.19	□□□□□ -0.62
SNHG5-217	ENST00000623650	FAM135B	Q49AJ0	1406 aa		11.19	□□□□□ -0.62
SNHG5-217	ENST00000623650	SRPK2	P78362	688 aa	Known RBP	11.19	□□□□□ -0.62
SNHG5-217	ENST00000623650	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.19	□□□□□ -0.62
SNHG5-217	ENST00000623650	PROSER2	Q86WR7	435 aa	Predicted RBP	11.19	□□□□□ -0.62
SNHG5-217	ENST00000623650	SIRT1	Q96EB6	747 aa		11.19	□□□□□ -0.62
SNHG5-217	ENST00000623650	AXIN2	Q9Y2T1	843 aa		11.19	□□□□□ -0.62
SNHG5-217	ENST00000623650	NKTR	P30414	1462 aa	Known RBP	11.19	□□□□□ -0.62
SNHG5-217	ENST00000623650	NRXN3	Q9Y4C0	1643 aa		11.18	□□□□□ -0.62
SNHG5-217	ENST00000623650	GJA5	P36382	358 aa		11.18	□□□□□ -0.62
SNHG5-217	ENST00000623650	RFC5	P40937	340 aa		11.18	□□□□□ -0.62
SNHG5-217	ENST00000623650	DMRTA1	Q5VZB9	504 aa		11.18	□□□□□ -0.62
SNHG5-217	ENST00000623650	PPP2R2D	Q66LE6	453 aa		11.18	□□□□□ -0.62
SNHG5-217	ENST00000623650	MOXD2P	A6NHM9	499 aa		11.17	□□□□□ -0.62
SNHG5-217	ENST00000623650		A6NJR5	290 aa		11.17	□□□□□ -0.62
SNHG5-217	ENST00000623650	SWT1	Q5T5J6	900 aa	Known RBP	11.17	□□□□□ -0.62
SNHG5-217	ENST00000623650	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.17	□□□□□ -0.62
SNHG5-217	ENST00000623650	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.17	□□□□□ -0.62
SNHG5-217	ENST00000623650	CPS1	P31327	1500 aa		11.17	□□□□□ -0.62
SNHG5-217	ENST00000623650	TECPR2	O15040	1411 aa		11.17	□□□□□ -0.62
SNHG5-217	ENST00000623650	KNDC1	Q76NI1	1749 aa		11.16	□□□□□ -0.62
SNHG5-217	ENST00000623650	KDM4A	O75164	1064 aa		11.16	□□□□□ -0.62
SNHG5-217	ENST00000623650	BANK1	Q8NDB2	785 aa		11.16	□□□□□ -0.62
SNHG5-217	ENST00000623650	SBNO2	Q9Y2G9	1366 aa		11.16	□□□□□ -0.62
SNHG5-217	ENST00000623650	ASXL1	Q8IXJ9	1541 aa		11.15	□□□□□ -0.62
SNHG5-217	ENST00000623650	ATF3	P18847	181 aa		11.15	□□□□□ -0.62
SNHG5-217	ENST00000623650	NDUFV2	P19404	249 aa		11.15	□□□□□ -0.62
SNHG5-217	ENST00000623650	GCGR	P47871	477 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms