RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 KCNQ4P56696 695 aa15.49■□□□□ 0.07
LINC00963-214ENST00000622680 TESK2Q96S53 571 aa15.49■□□□□ 0.07
LINC00963-214ENST00000622680 HOXC9P31274 260 aa15.48■□□□□ 0.07
LINC00963-214ENST00000622680 ARXQ96QS3 562 aa15.48■□□□□ 0.07
LINC00963-214ENST00000622680 ANKRD36BQ8N2N9 1353 aa15.48■□□□□ 0.07
LINC00963-214ENST00000622680 MAP3K5Q99683 1374 aa15.48■□□□□ 0.07
LINC00963-214ENST00000622680 ST20-MTHFSA0A0A6YYL1 179 aa15.47■□□□□ 0.07
LINC00963-214ENST00000622680 ZNF784Q8NCA9 323 aaPredicted RBP15.47■□□□□ 0.07
LINC00963-214ENST00000622680 AKT1S1Q96B36 256 aa15.47■□□□□ 0.07
LINC00963-214ENST00000622680 SYTL4Q96C24 671 aaPredicted RBP15.47■□□□□ 0.07
LINC00963-214ENST00000622680 COG3Q96JB2 828 aa15.47■□□□□ 0.07
LINC00963-214ENST00000622680 PNPLA7Q6ZV29 1317 aa15.46■□□□□ 0.07
LINC00963-214ENST00000622680 KLHL34Q8N239 644 aa15.46■□□□□ 0.07
LINC00963-214ENST00000622680 RTL1A6NKG5 1358 aa15.46■□□□□ 0.07
LINC00963-214ENST00000622680 C4BP0C0L5 1744 aa15.46■□□□□ 0.06
LINC00963-214ENST00000622680 AMPHP49418 695 aa15.45■□□□□ 0.06
LINC00963-214ENST00000622680 PUS7Q96PZ0 661 aaKnown RBP15.45■□□□□ 0.06
LINC00963-214ENST00000622680 PRIM1P49642 420 aaKnown RBP15.44■□□□□ 0.06
LINC00963-214ENST00000622680 RRS1Q15050 365 aaKnown RBP15.44■□□□□ 0.06
LINC00963-214ENST00000622680 USHBP1Q8N6Y0 703 aa15.44■□□□□ 0.06
LINC00963-214ENST00000622680 VIRMAQ69YN4 1812 aaKnown RBP15.44■□□□□ 0.06
LINC00963-214ENST00000622680 SLC27A3Q5K4L6 730 aa15.43■□□□□ 0.06
LINC00963-214ENST00000622680 GGNBP2Q9H3C7 697 aa15.42■□□□□ 0.06
LINC00963-214ENST00000622680 SMG6Q86US8 1419 aaKnown RBP15.42■□□□□ 0.06
LINC00963-214ENST00000622680 CEP350Q5VT06 3117 aa15.41■□□□□ 0.06
LINC00963-214ENST00000622680 USP47Q96K76 1375 aa15.41■□□□□ 0.06
LINC00963-214ENST00000622680 NBPF6Q5VWK0 638 aa15.41■□□□□ 0.06
LINC00963-214ENST00000622680 ZCRB1Q8TBF4 217 aaKnown RBP15.41■□□□□ 0.06
LINC00963-214ENST00000622680 NBPF4Q96M43 638 aa15.41■□□□□ 0.06
LINC00963-214ENST00000622680 TFCP2L1Q9NZI6 479 aa15.41■□□□□ 0.06
LINC00963-214ENST00000622680 POLD1P28340 1107 aa15.39■□□□□ 0.05
LINC00963-214ENST00000622680 GPR162Q16538 588 aa15.39■□□□□ 0.05
LINC00963-214ENST00000622680 PELP1Q8IZL8 1130 aaKnown RBP15.39■□□□□ 0.05
LINC00963-214ENST00000622680 NLGN2Q8NFZ4 835 aa15.39■□□□□ 0.05
LINC00963-214ENST00000622680 SLC16A10Q8TF71 515 aa15.39■□□□□ 0.05
LINC00963-214ENST00000622680 CCNL1Q9UK58 526 aaPredicted RBP15.39■□□□□ 0.05
LINC00963-214ENST00000622680 FYB1O15117 783 aa15.38■□□□□ 0.05
LINC00963-214ENST00000622680 FLT4P35916 1363 aa15.36■□□□□ 0.05
LINC00963-214ENST00000622680 N4BP2Q86UW6 1770 aaPredicted RBP15.36■□□□□ 0.05
LINC00963-214ENST00000622680 MSH5O43196 834 aa15.36■□□□□ 0.05
LINC00963-214ENST00000622680 RAPGEF4Q8WZA2 1011 aa15.36■□□□□ 0.05
LINC00963-214ENST00000622680 COL5A3P25940 1745 aaPredicted RBP15.36■□□□□ 0.05
LINC00963-214ENST00000622680 KIF13BQ9NQT8 1826 aa15.36■□□□□ 0.05
LINC00963-214ENST00000622680 INSRP06213 1382 aa15.36■□□□□ 0.05
LINC00963-214ENST00000622680 KIAA1551Q9HCM1 1747 aa15.35■□□□□ 0.05
LINC00963-214ENST00000622680 TMF1P82094 1093 aa15.35■□□□□ 0.05
LINC00963-214ENST00000622680 HSP90AB2PQ58FF8 381 aa15.35■□□□□ 0.05
LINC00963-214ENST00000622680 MSL1Q68DK7 614 aa15.35■□□□□ 0.05
LINC00963-214ENST00000622680 PCDH11XQ9BZA7 1347 aa15.35■□□□□ 0.05
LINC00963-214ENST00000622680 PCDH11YQ9BZA8 1340 aa15.35■□□□□ 0.05
LINC00963-214ENST00000622680 NSD3Q9BZ95 1437 aa15.34■□□□□ 0.05
LINC00963-214ENST00000622680 C4AP0C0L4 1744 aa15.34■□□□□ 0.05
LINC00963-214ENST00000622680 COL23A1Q86Y22 540 aaPredicted RBP15.34■□□□□ 0.05
LINC00963-214ENST00000622680 CGNL1Q0VF96 1302 aa15.34■□□□□ 0.05
LINC00963-214ENST00000622680 PALLDQ8WX93 1383 aa15.34■□□□□ 0.05
LINC00963-214ENST00000622680 SENP3-EIF4A1A0A087X0R7 540 aa15.33■□□□□ 0.04
LINC00963-214ENST00000622680 TATP17735 454 aaPredicted RBP15.33■□□□□ 0.04
LINC00963-214ENST00000622680 BRCA1P38398 1863 aaKnown RBP15.33■□□□□ 0.04
LINC00963-214ENST00000622680 NCAPD2Q15021 1401 aa15.33■□□□□ 0.04
LINC00963-214ENST00000622680 YBX3P16989 372 aaKnown RBP eCLIP15.32■□□□□ 0.04
LINC00963-214ENST00000622680 EMILIN1Q9Y6C2 1016 aa15.32■□□□□ 0.04
LINC00963-214ENST00000622680 MYH14Q7Z406 1995 aaKnown RBP15.32■□□□□ 0.04
LINC00963-214ENST00000622680 CYP27B1O15528 508 aa15.31■□□□□ 0.04
LINC00963-214ENST00000622680 C1QTNF8P60827 252 aa15.31■□□□□ 0.04
LINC00963-214ENST00000622680 KIF24Q5T7B8 1368 aa15.31■□□□□ 0.04
LINC00963-214ENST00000622680 SLC24A1O60721 1099 aa15.3■□□□□ 0.04
LINC00963-214ENST00000622680 MPRIPQ6WCQ1 1025 aa15.3■□□□□ 0.04
LINC00963-214ENST00000622680 ZNF831Q5JPB2 1677 aa15.29■□□□□ 0.04
LINC00963-214ENST00000622680 AMIGO3Q86WK7 504 aa15.29■□□□□ 0.04
LINC00963-214ENST00000622680 SMIM5Q71RC9 77 aa15.28■□□□□ 0.04
LINC00963-214ENST00000622680 CARD14Q9BXL6 1004 aa15.28■□□□□ 0.04
LINC00963-214ENST00000622680 SCN11AQ9UI33 1791 aa15.28■□□□□ 0.04
LINC00963-214ENST00000622680 PPM1GO15355 546 aaPredicted RBP15.27■□□□□ 0.04
LINC00963-214ENST00000622680 GIGYF1O75420 1035 aaPredicted RBP15.27■□□□□ 0.04
LINC00963-214ENST00000622680 ARFGEF1Q9Y6D6 1849 aa15.26■□□□□ 0.03
LINC00963-214ENST00000622680 ATP10DQ9P241 1426 aa15.26■□□□□ 0.03
LINC00963-214ENST00000622680 PHF14O94880 888 aa15.25■□□□□ 0.03
LINC00963-214ENST00000622680 AK7Q96M32 723 aa15.25■□□□□ 0.03
LINC00963-214ENST00000622680 TJP1Q07157 1748 aa15.25■□□□□ 0.03
LINC00963-214ENST00000622680 CICQ96RK0 1608 aaPredicted RBP15.25■□□□□ 0.03
LINC00963-214ENST00000622680 CDCA8Q53HL2 280 aa15.24■□□□□ 0.03
LINC00963-214ENST00000622680 PIGBQ92521 554 aa15.24■□□□□ 0.03
LINC00963-214ENST00000622680 LINC00116Q8NCU8 138 aa15.23■□□□□ 0.03
LINC00963-214ENST00000622680 WWC3Q9ULE0 1092 aa15.23■□□□□ 0.03
LINC00963-214ENST00000622680 GRIN3BO60391 1043 aa15.22■□□□□ 0.03
LINC00963-214ENST00000622680 FLAD1Q8NFF5 587 aa15.22■□□□□ 0.03
LINC00963-214ENST00000622680 SMARCC1Q92922 1105 aaPredicted RBP15.22■□□□□ 0.03
LINC00963-214ENST00000622680 CCDC88AQ3V6T2 1871 aa15.21■□□□□ 0.03
LINC00963-214ENST00000622680 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.21■□□□□ 0.03
LINC00963-214ENST00000622680 EYA1Q99502 592 aa15.21■□□□□ 0.03
LINC00963-214ENST00000622680 SPG7Q9UQ90 795 aa15.21■□□□□ 0.03
LINC00963-214ENST00000622680 CD2APQ9Y5K6 639 aa15.21■□□□□ 0.03
LINC00963-214ENST00000622680 ADCY9O60503 1353 aa15.21■□□□□ 0.02
LINC00963-214ENST00000622680 SBF1O95248 1867 aa15.2■□□□□ 0.02
LINC00963-214ENST00000622680 WASHC2AQ641Q2 1341 aa15.2■□□□□ 0.02
LINC00963-214ENST00000622680 IGSF1Q8N6C5 1336 aa15.2■□□□□ 0.02
LINC00963-214ENST00000622680 AFDNP55196 1824 aaKnown RBP15.2■□□□□ 0.02
LINC00963-214ENST00000622680 NKX1-1Q15270 411 aaPredicted RBP15.2■□□□□ 0.02
LINC00963-214ENST00000622680 LOC102724428A0A0B4J2F2 783 aa15.19■□□□□ 0.02
LINC00963-214ENST00000622680 TNNT2P45379 298 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms