RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 SPINK5Q9NQ38 1064 aaPredicted RBP11.64□□□□□ -0.55
CLTCL1-211ENST00000621271 NOB1Q9ULX3 412 aaKnown RBP11.63□□□□□ -0.55
CLTCL1-211ENST00000621271 CCDC173Q0VFZ6 552 aa11.63□□□□□ -0.55
CLTCL1-211ENST00000621271 CTNNA3Q9UI47 895 aa11.63□□□□□ -0.55
CLTCL1-211ENST00000621271 PBRM1Q86U86 1689 aa11.63□□□□□ -0.55
CLTCL1-211ENST00000621271 TNNT3P45378 269 aaPredicted RBP11.63□□□□□ -0.55
CLTCL1-211ENST00000621271 GCC1Q96CN9 775 aa11.63□□□□□ -0.55
CLTCL1-211ENST00000621271 USP5P45974 858 aa11.63□□□□□ -0.55
CLTCL1-211ENST00000621271 BACH2Q9BYV9 841 aa11.63□□□□□ -0.55
CLTCL1-211ENST00000621271 TRMT112Q9UI30 125 aaKnown RBP11.63□□□□□ -0.55
CLTCL1-211ENST00000621271 WDR7Q9Y4E6 1490 aa11.63□□□□□ -0.55
CLTCL1-211ENST00000621271 AIDAQ96BJ3 306 aa11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 UGGT2Q9NYU1 1516 aa11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 C6orf229H3BNL8 230 aa11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 MYCNP04198 464 aaPredicted RBP11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 POLR3DP05423 398 aaPredicted RBP11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 GPS2Q13227 327 aa11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 C22orf23Q9BZE7 217 aa11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 AKAP2Q9Y2D5 859 aa11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 RFC4P35249 363 aa11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 LARP1Q6PKG0 1096 aaKnown RBP11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 MAGEC2Q9UBF1 373 aaPredicted RBP11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 DZIP1Q86YF9 867 aaKnown RBP11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 JMYQ8N9B5 988 aa11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 CHMP4BP1P59074 171 aa11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 SLF2Q8IX21 1173 aa11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 ZNF622Q969S3 477 aaKnown RBP eCLIP11.62□□□□□ -0.55
CLTCL1-211ENST00000621271 DAPK1P53355 1430 aa11.61□□□□□ -0.55
CLTCL1-211ENST00000621271 USHBP1Q8N6Y0 703 aa11.61□□□□□ -0.55
CLTCL1-211ENST00000621271 TEX13AQ9BXU3 409 aaPredicted RBP11.61□□□□□ -0.55
CLTCL1-211ENST00000621271 FAM13BQ9NYF5 915 aa11.61□□□□□ -0.55
CLTCL1-211ENST00000621271 ZNF592Q92610 1267 aa11.61□□□□□ -0.55
CLTCL1-211ENST00000621271 ZNF396Q96N95 335 aaPredicted RBP11.61□□□□□ -0.55
CLTCL1-211ENST00000621271 C8orf37Q96NL8 207 aa11.61□□□□□ -0.55
CLTCL1-211ENST00000621271 CT47B1P0C2W7 299 aaPredicted RBP11.61□□□□□ -0.55
CLTCL1-211ENST00000621271 STK38Q15208 465 aa11.61□□□□□ -0.55
CLTCL1-211ENST00000621271 NBPF8Q3BBV2 869 aa11.61□□□□□ -0.55
CLTCL1-211ENST00000621271 NBPF14Q5TI25 921 aa11.61□□□□□ -0.55
CLTCL1-211ENST00000621271 SCLT1Q96NL6 688 aa11.61□□□□□ -0.55
CLTCL1-211ENST00000621271 NOL7Q9UMY1 257 aaKnown RBP11.61□□□□□ -0.55
CLTCL1-211ENST00000621271 PIP4K2AP48426 406 aaPredicted RBP11.6□□□□□ -0.55
CLTCL1-211ENST00000621271 NFE2L2Q16236 605 aa11.6□□□□□ -0.55
CLTCL1-211ENST00000621271 CCDC141Q6ZP82 1450 aa11.6□□□□□ -0.55
CLTCL1-211ENST00000621271 TMEM87AQ8NBN3 555 aa11.6□□□□□ -0.55
CLTCL1-211ENST00000621271 BMP2KQ9NSY1 1161 aaPredicted RBP11.6□□□□□ -0.55
CLTCL1-211ENST00000621271 KINO60870 393 aaKnown RBP11.6□□□□□ -0.55
CLTCL1-211ENST00000621271 IFIT5Q13325 482 aaKnown RBP11.6□□□□□ -0.55
CLTCL1-211ENST00000621271 TNIP1Q15025 636 aa11.6□□□□□ -0.55
CLTCL1-211ENST00000621271 WASLO00401 505 aaPredicted RBP11.6□□□□□ -0.55
CLTCL1-211ENST00000621271 NEK4P51957 841 aa11.6□□□□□ -0.55
CLTCL1-211ENST00000621271 CYP46A1Q9Y6A2 500 aa11.6□□□□□ -0.55
CLTCL1-211ENST00000621271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 MATR3P43243 847 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 ANKRD1Q15327 319 aa11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 WDR63Q8IWG1 891 aa11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 FMNL2Q96PY5 1086 aa11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 MKNK2Q9HBH9 465 aa11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 A0A087WZG4 1122 aa11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 CDKL5O76039 1030 aa11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 TRIM21P19474 475 aaKnown RBP11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 IDI1Q13907 227 aa11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 POLD1P28340 1107 aa11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 ATF7IPQ6VMQ6 1270 aa11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 ARAP1Q96P48 1450 aa11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 SSBP05455 408 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 MCM2P49736 904 aa11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 TAF7Q15545 349 aaPredicted RBP11.59□□□□□ -0.55
CLTCL1-211ENST00000621271 ST5P78524 1137 aa11.58□□□□□ -0.56
CLTCL1-211ENST00000621271 FILIP1LQ4L180 1135 aa11.58□□□□□ -0.56
CLTCL1-211ENST00000621271 DDX46Q7L014 1031 aaKnown RBP11.58□□□□□ -0.56
CLTCL1-211ENST00000621271 C16orf71Q8IYS4 520 aaPredicted RBP11.58□□□□□ -0.56
CLTCL1-211ENST00000621271 PDILTQ8N807 584 aa11.58□□□□□ -0.56
CLTCL1-211ENST00000621271 MYD88Q99836 296 aa11.58□□□□□ -0.56
CLTCL1-211ENST00000621271 IFNL2Q8IZJ0 200 aa11.58□□□□□ -0.56
CLTCL1-211ENST00000621271 CDR1P51861 262 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 STIM1Q13586 685 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 NME9Q86XW9 330 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 MYO1BO43795 1136 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 SLC5A1P13866 664 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 CDCA7LQ96GN5 454 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 TNRQ92752 1358 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 NPHP3Q7Z494 1330 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 TRAK2O60296 914 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 SEC63Q9UGP8 760 aaKnown RBP11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 ANKRD18BA2A2Z9 1011 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 DUSP27Q5VZP5 1158 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 MCM10Q7L590 875 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 MAP7D2Q96T17 732 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 MIS18AQ9NYP9 233 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 NSD3Q9BZ95 1437 aa11.57□□□□□ -0.56
CLTCL1-211ENST00000621271 CHRNA2Q15822 529 aa11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 FEZ1Q99689 392 aa11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 MAP4K4O95819 1239 aaPredicted RBP11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 PPP4R3AQ6IN85 833 aa11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 CDC5LQ99459 802 aaKnown RBP11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 CHD1O14646 1710 aa11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 GRM1Q13255 1194 aa11.56□□□□□ -0.56
CLTCL1-211ENST00000621271 DESP17661 470 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms