RNA–Protein interactions for RNA: ENST00000619640.3

C2orf48-202, Transcript of chromosome 2 open reading frame 48, humanhuman

TSL 1 (best)

Gene C2orf48, Length 480 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf48-202ENST00000619640 UPF1Q92900 1129 aaKnown RBP eCLIP20.62■□□□□ 0.89
C2orf48-202ENST00000619640 MYBBP1AQ9BQG0 1328 aaKnown RBP20.61■□□□□ 0.89
C2orf48-202ENST00000619640 TATP17735 454 aaPredicted RBP20.6■□□□□ 0.89
C2orf48-202ENST00000619640 FAM182BQ5T319 152 aa20.6■□□□□ 0.89
C2orf48-202ENST00000619640 FAM196AQ6ZSG2 479 aa20.6■□□□□ 0.89
C2orf48-202ENST00000619640 AEBP1Q8IUX7 1158 aa20.59■□□□□ 0.89
C2orf48-202ENST00000619640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.59■□□□□ 0.89
C2orf48-202ENST00000619640 ZCRB1Q8TBF4 217 aaKnown RBP20.58■□□□□ 0.89
C2orf48-202ENST00000619640 SBF2Q86WG5 1849 aa20.57■□□□□ 0.88
C2orf48-202ENST00000619640 ANP32CO43423 234 aa20.57■□□□□ 0.88
C2orf48-202ENST00000619640 SULT6B1Q6IMI4 303 aa20.56■□□□□ 0.88
C2orf48-202ENST00000619640 CCDC125Q86Z20 511 aa20.55■□□□□ 0.88
C2orf48-202ENST00000619640 TNS1Q9HBL0 1735 aaKnown RBP20.55■□□□□ 0.88
C2orf48-202ENST00000619640 PCDH11XQ9BZA7 1347 aa20.53■□□□□ 0.88
C2orf48-202ENST00000619640 PCDH11YQ9BZA8 1340 aa20.53■□□□□ 0.88
C2orf48-202ENST00000619640 CYP27B1O15528 508 aa20.53■□□□□ 0.88
C2orf48-202ENST00000619640 NUDCQ9Y266 331 aa20.53■□□□□ 0.88
C2orf48-202ENST00000619640 NHSQ6T4R5 1651 aa20.51■□□□□ 0.87
C2orf48-202ENST00000619640 HMOX1P09601 288 aa20.51■□□□□ 0.87
C2orf48-202ENST00000619640 DDX54Q8TDD1 881 aaKnown RBP20.51■□□□□ 0.87
C2orf48-202ENST00000619640 SPG7Q9UQ90 795 aa20.51■□□□□ 0.87
C2orf48-202ENST00000619640 U2SURPO15042 1029 aaKnown RBP20.5■□□□□ 0.87
C2orf48-202ENST00000619640 NKX1-1Q15270 411 aaPredicted RBP20.5■□□□□ 0.87
C2orf48-202ENST00000619640 AMOTQ4VCS5 1084 aa20.5■□□□□ 0.87
C2orf48-202ENST00000619640 PLEKHO1Q53GL0 409 aaPredicted RBP20.49■□□□□ 0.87
C2orf48-202ENST00000619640 TRIM37O94972 964 aa20.48■□□□□ 0.87
C2orf48-202ENST00000619640 RSPH6AQ9H0K4 717 aa20.48■□□□□ 0.87
C2orf48-202ENST00000619640 DOT1LQ8TEK3 1739 aa20.47■□□□□ 0.87
C2orf48-202ENST00000619640 TOGARAM1Q9Y4F4 1720 aa20.47■□□□□ 0.87
C2orf48-202ENST00000619640 PHKG2P15735 406 aa20.47■□□□□ 0.87
C2orf48-202ENST00000619640 BCL11BQ9C0K0 894 aaPredicted RBP20.47■□□□□ 0.87
C2orf48-202ENST00000619640 IFNL2Q8IZJ0 200 aa20.46■□□□□ 0.87
C2orf48-202ENST00000619640 FCHSD2O94868 740 aa20.45■□□□□ 0.86
C2orf48-202ENST00000619640 U2AF1L5P0DN76 240 aaPredicted RBP20.45■□□□□ 0.86
C2orf48-202ENST00000619640 U2AF1Q01081 240 aaKnown RBP eCLIP20.45■□□□□ 0.86
C2orf48-202ENST00000619640 PTF1AQ7RTS3 328 aa20.45■□□□□ 0.86
C2orf48-202ENST00000619640 RGPD3A6NKT7 1758 aaPredicted RBP20.44■□□□□ 0.86
C2orf48-202ENST00000619640 RGPD4Q7Z3J3 1758 aa20.44■□□□□ 0.86
C2orf48-202ENST00000619640 KCNQ2O43526 872 aa20.43■□□□□ 0.86
C2orf48-202ENST00000619640 DIEXFQ68CQ4 756 aaKnown RBP20.43■□□□□ 0.86
C2orf48-202ENST00000619640 ADAMTS7Q9UKP4 1686 aa20.42■□□□□ 0.86
C2orf48-202ENST00000619640 PRKAR2BP31323 418 aa20.42■□□□□ 0.86
C2orf48-202ENST00000619640 SF3B2Q13435 895 aaKnown RBP20.42■□□□□ 0.86
C2orf48-202ENST00000619640 ZNF530Q6P9A1 599 aaPredicted RBP20.42■□□□□ 0.86
C2orf48-202ENST00000619640 ACSBG1Q96GR2 724 aa20.42■□□□□ 0.86
C2orf48-202ENST00000619640 KDM6AO15550 1401 aaPredicted RBP20.42■□□□□ 0.86
C2orf48-202ENST00000619640 BTAF1O14981 1849 aa20.41■□□□□ 0.86
C2orf48-202ENST00000619640 BAG6P46379 1132 aa20.41■□□□□ 0.86
C2orf48-202ENST00000619640 MTHFSDQ2M296 383 aaKnown RBP20.41■□□□□ 0.86
C2orf48-202ENST00000619640 HSP90AB1P08238 724 aaKnown RBP20.4■□□□□ 0.86
C2orf48-202ENST00000619640 ITGB4P16144 1822 aa20.4■□□□□ 0.86
C2orf48-202ENST00000619640 DEFB132Q7Z7B7 95 aa20.4■□□□□ 0.86
C2orf48-202ENST00000619640 PHACTR3Q96KR7 559 aa20.4■□□□□ 0.86
C2orf48-202ENST00000619640 PNNQ9H307 717 aaKnown RBP20.4■□□□□ 0.86
C2orf48-202ENST00000619640 PLSCR1O15162 318 aa20.39■□□□□ 0.85
C2orf48-202ENST00000619640 APBA3O96018 575 aa20.39■□□□□ 0.85
C2orf48-202ENST00000619640 PRIM1P49642 420 aaKnown RBP20.39■□□□□ 0.85
C2orf48-202ENST00000619640 AKAP4Q5JQC9 854 aa20.39■□□□□ 0.85
C2orf48-202ENST00000619640 DCAF5Q96JK2 942 aa20.39■□□□□ 0.85
C2orf48-202ENST00000619640 CAMKK2Q96RR4 588 aa20.39■□□□□ 0.85
C2orf48-202ENST00000619640 PLEKHF1Q96S99 279 aa20.39■□□□□ 0.85
C2orf48-202ENST00000619640 CCDC184Q52MB2 194 aa20.38■□□□□ 0.85
C2orf48-202ENST00000619640 SCN11AQ9UI33 1791 aa20.38■□□□□ 0.85
C2orf48-202ENST00000619640 RREB1Q92766 1687 aa20.38■□□□□ 0.85
C2orf48-202ENST00000619640 EN1Q05925 392 aaPredicted RBP20.37■□□□□ 0.85
C2orf48-202ENST00000619640 WDR43Q15061 677 aaKnown RBP eCLIP20.37■□□□□ 0.85
C2orf48-202ENST00000619640 C1orf141Q5JVX7 400 aa20.37■□□□□ 0.85
C2orf48-202ENST00000619640 GAS2L2Q8NHY3 880 aa20.37■□□□□ 0.85
C2orf48-202ENST00000619640 ERVV-2B6SEH9 535 aa20.36■□□□□ 0.85
C2orf48-202ENST00000619640 KAT6BQ8WYB5 2073 aa20.36■□□□□ 0.85
C2orf48-202ENST00000619640 MRS2Q9HD23 443 aa20.35■□□□□ 0.85
C2orf48-202ENST00000619640 MRC1P22897 1456 aa20.35■□□□□ 0.85
C2orf48-202ENST00000619640 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
C2orf48-202ENST00000619640 NEFMP07197 916 aa20.34■□□□□ 0.85
C2orf48-202ENST00000619640 MAP3K5Q99683 1374 aa20.34■□□□□ 0.85
C2orf48-202ENST00000619640 LY75O60449 1722 aa20.33■□□□□ 0.85
C2orf48-202ENST00000619640 EZH2Q15910 746 aaKnown RBP20.33■□□□□ 0.85
C2orf48-202ENST00000619640 MPRIPQ6WCQ1 1025 aa20.33■□□□□ 0.85
C2orf48-202ENST00000619640 SYTL4Q96C24 671 aaPredicted RBP20.33■□□□□ 0.85
C2orf48-202ENST00000619640 CCER2I3L3R5 266 aa20.32■□□□□ 0.84
C2orf48-202ENST00000619640 PROM2Q8N271 834 aa20.32■□□□□ 0.84
C2orf48-202ENST00000619640 PNISRQ8TF01 805 aaKnown RBP20.32■□□□□ 0.84
C2orf48-202ENST00000619640 PIGBQ92521 554 aa20.32■□□□□ 0.84
C2orf48-202ENST00000619640 ADAMTS8Q9UP79 889 aa20.32■□□□□ 0.84
C2orf48-202ENST00000619640 NUP188Q5SRE5 1749 aa20.32■□□□□ 0.84
C2orf48-202ENST00000619640 GNAT3A8MTJ3 354 aa20.31■□□□□ 0.84
C2orf48-202ENST00000619640 RNMTO43148 476 aaKnown RBP20.31■□□□□ 0.84
C2orf48-202ENST00000619640 CEMIPQ8WUJ3 1361 aa20.31■□□□□ 0.84
C2orf48-202ENST00000619640 LGR6Q9HBX8 967 aa20.3■□□□□ 0.84
C2orf48-202ENST00000619640 TMOD3Q9NYL9 352 aa20.3■□□□□ 0.84
C2orf48-202ENST00000619640 IL17REQ8NFR9 667 aa20.29■□□□□ 0.84
C2orf48-202ENST00000619640 DLG5Q8TDM6 1919 aa20.29■□□□□ 0.84
C2orf48-202ENST00000619640 SIPA1L3O60292 1781 aaPredicted RBP20.29■□□□□ 0.84
C2orf48-202ENST00000619640 MAPK8IP3Q9UPT6 1336 aa20.28■□□□□ 0.84
C2orf48-202ENST00000619640 HTATSF1O43719 755 aaKnown RBP20.28■□□□□ 0.84
C2orf48-202ENST00000619640 NFE2L2Q16236 605 aa20.28■□□□□ 0.84
C2orf48-202ENST00000619640 TXNRD1Q16881 649 aa20.28■□□□□ 0.84
C2orf48-202ENST00000619640 CABP4P57796 275 aa20.27■□□□□ 0.84
C2orf48-202ENST00000619640 RUNDC1Q96C34 613 aa20.27■□□□□ 0.84
C2orf48-202ENST00000619640 SLC52A2Q9HAB3 445 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms