RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 SKOR2Q2VWA4 1001 aaPredicted RBP9.89□□□□□ -0.83
CHD7-212ENST00000618450 GPT2Q8TD30 523 aa9.89□□□□□ -0.83
CHD7-212ENST00000618450 ZRANB1Q9UGI0 708 aa9.89□□□□□ -0.83
CHD7-212ENST00000618450 PIK3C2AO00443 1686 aa9.89□□□□□ -0.83
CHD7-212ENST00000618450 MED1Q15648 1581 aaPredicted RBP9.89□□□□□ -0.83
CHD7-212ENST00000618450 FBXO31Q5XUX0 539 aaPredicted RBP9.89□□□□□ -0.83
CHD7-212ENST00000618450 SAFB2Q14151 953 aaKnown RBP eCLIP9.88□□□□□ -0.83
CHD7-212ENST00000618450 ANKRD45Q5TZF3 282 aa9.88□□□□□ -0.83
CHD7-212ENST00000618450 CEP85Q6P2H3 762 aa9.88□□□□□ -0.83
CHD7-212ENST00000618450 SIRT1Q96EB6 747 aa9.88□□□□□ -0.83
CHD7-212ENST00000618450 PNNQ9H307 717 aaKnown RBP9.88□□□□□ -0.83
CHD7-212ENST00000618450 TCHHQ07283 1943 aa9.88□□□□□ -0.83
CHD7-212ENST00000618450 RGPD8O14715 1765 aaPredicted RBP9.88□□□□□ -0.83
CHD7-212ENST00000618450 SRPK2P78362 688 aaKnown RBP9.88□□□□□ -0.83
CHD7-212ENST00000618450 GNAI1P63096 354 aa9.88□□□□□ -0.83
CHD7-212ENST00000618450 PRR36Q9H6K5 1346 aa9.88□□□□□ -0.83
CHD7-212ENST00000618450 FAM83GA6ND36 823 aa9.87□□□□□ -0.83
CHD7-212ENST00000618450 CDC45O75419 566 aa9.87□□□□□ -0.83
CHD7-212ENST00000618450 KDRP35968 1356 aa9.87□□□□□ -0.83
CHD7-212ENST00000618450 MSH6P52701 1360 aa9.87□□□□□ -0.83
CHD7-212ENST00000618450 TWISTNBQ3B726 338 aaPredicted RBP9.87□□□□□ -0.83
CHD7-212ENST00000618450 WAPLQ7Z5K2 1190 aa9.87□□□□□ -0.83
CHD7-212ENST00000618450 STK26Q9P289 416 aa9.86□□□□□ -0.83
CHD7-212ENST00000618450 KDM3BQ7LBC6 1761 aa9.86□□□□□ -0.83
CHD7-212ENST00000618450 NSFL1CQ9UNZ2 370 aaKnown RBP9.86□□□□□ -0.83
CHD7-212ENST00000618450 SDSP20132 328 aa9.86□□□□□ -0.83
CHD7-212ENST00000618450 HS1BP3Q53T59 392 aa9.86□□□□□ -0.83
CHD7-212ENST00000618450 NME9Q86XW9 330 aa9.86□□□□□ -0.83
CHD7-212ENST00000618450 TERF1P54274 439 aa9.85□□□□□ -0.83
CHD7-212ENST00000618450 CEP170BQ9Y4F5 1589 aaPredicted RBP9.85□□□□□ -0.83
CHD7-212ENST00000618450 RRP9O43818 475 aaKnown RBP9.85□□□□□ -0.83
CHD7-212ENST00000618450 ZNF500O60304 480 aaPredicted RBP9.85□□□□□ -0.83
CHD7-212ENST00000618450 HMOX1P09601 288 aa9.85□□□□□ -0.83
CHD7-212ENST00000618450 ADAMTS13Q76LX8 1427 aa9.85□□□□□ -0.83
CHD7-212ENST00000618450 CHD2O14647 1828 aaKnown RBP9.85□□□□□ -0.83
CHD7-212ENST00000618450 ARHGEF10O15013 1369 aa9.85□□□□□ -0.83
CHD7-212ENST00000618450 WASLO00401 505 aaPredicted RBP9.85□□□□□ -0.83
CHD7-212ENST00000618450 PTMSP20962 102 aa9.85□□□□□ -0.83
CHD7-212ENST00000618450 CUL4AQ13619 759 aa9.85□□□□□ -0.83
CHD7-212ENST00000618450 RABEP1Q15276 862 aa9.85□□□□□ -0.83
CHD7-212ENST00000618450 ZSCAN23Q3MJ62 389 aa9.85□□□□□ -0.83
CHD7-212ENST00000618450 RBSNQ9H1K0 784 aa9.85□□□□□ -0.83
CHD7-212ENST00000618450 CCDC173Q0VFZ6 552 aa9.84□□□□□ -0.83
CHD7-212ENST00000618450 KRT24Q2M2I5 525 aa9.84□□□□□ -0.83
CHD7-212ENST00000618450 HDGFL2Q7Z4V5 671 aaPredicted RBP9.84□□□□□ -0.83
CHD7-212ENST00000618450 NCKAP5LQ9HCH0 1330 aa9.84□□□□□ -0.83
CHD7-212ENST00000618450 OFD1O75665 1012 aa9.84□□□□□ -0.83
CHD7-212ENST00000618450 ZGPATQ8N5A5 531 aaKnown RBP9.84□□□□□ -0.83
CHD7-212ENST00000618450 GBP4Q96PP9 640 aa9.84□□□□□ -0.83
CHD7-212ENST00000618450 NOL7Q9UMY1 257 aaKnown RBP9.83□□□□□ -0.84
CHD7-212ENST00000618450 PHRF1Q9P1Y6 1649 aaKnown RBP9.83□□□□□ -0.84
CHD7-212ENST00000618450 PLEKHG5O94827 1062 aa9.83□□□□□ -0.84
CHD7-212ENST00000618450 PXDNLA1KZ92 1463 aa9.83□□□□□ -0.84
CHD7-212ENST00000618450 TMEM63CQ9P1W3 806 aa9.83□□□□□ -0.84
CHD7-212ENST00000618450 DCTN1Q14203 1278 aa9.82□□□□□ -0.84
CHD7-212ENST00000618450 RPAP2Q8IXW5 612 aaPredicted RBP9.82□□□□□ -0.84
CHD7-212ENST00000618450 API5Q9BZZ5 524 aaKnown RBP9.82□□□□□ -0.84
CHD7-212ENST00000618450 PTPRCP08575 1304 aa9.82□□□□□ -0.84
CHD7-212ENST00000618450 CALD1Q05682 793 aaKnown RBP9.82□□□□□ -0.84
CHD7-212ENST00000618450 EIF4A2Q14240 407 aaKnown RBP9.82□□□□□ -0.84
CHD7-212ENST00000618450 CHAMP1Q96JM3 812 aa9.82□□□□□ -0.84
CHD7-212ENST00000618450 SIPA1L3O60292 1781 aaPredicted RBP9.82□□□□□ -0.84
CHD7-212ENST00000618450 AEBP1Q8IUX7 1158 aa9.82□□□□□ -0.84
CHD7-212ENST00000618450 CHMP4BQ9H444 224 aaKnown RBP9.82□□□□□ -0.84
CHD7-212ENST00000618450 PPP6R1Q9UPN7 881 aa9.82□□□□□ -0.84
CHD7-212ENST00000618450 KIF13AQ9H1H9 1805 aa9.82□□□□□ -0.84
CHD7-212ENST00000618450 ZSCAN30Q86W11 494 aa9.81□□□□□ -0.84
CHD7-212ENST00000618450 IL25Q9H293 177 aa9.81□□□□□ -0.84
CHD7-212ENST00000618450 ROBO2Q9HCK4 1378 aa9.81□□□□□ -0.84
CHD7-212ENST00000618450 USP6P35125 1406 aa9.81□□□□□ -0.84
CHD7-212ENST00000618450 HSP90AB1P08238 724 aaKnown RBP9.81□□□□□ -0.84
CHD7-212ENST00000618450 PRIM1P49642 420 aaKnown RBP9.81□□□□□ -0.84
CHD7-212ENST00000618450 MEIS3Q99687 375 aa9.81□□□□□ -0.84
CHD7-212ENST00000618450 BRD1O95696 1058 aa9.81□□□□□ -0.84
CHD7-212ENST00000618450 CWC22Q9HCG8 908 aaKnown RBP9.81□□□□□ -0.84
CHD7-212ENST00000618450 ADAMTS7Q9UKP4 1686 aa9.81□□□□□ -0.84
CHD7-212ENST00000618450 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.8□□□□□ -0.84
CHD7-212ENST00000618450 NASPP49321 788 aaPredicted RBP9.8□□□□□ -0.84
CHD7-212ENST00000618450 PTPRUQ92729 1446 aa9.8□□□□□ -0.84
CHD7-212ENST00000618450 RPAP1Q9BWH6 1393 aaPredicted RBP9.8□□□□□ -0.84
CHD7-212ENST00000618450 EIF5BO60841 1220 aaKnown RBP9.8□□□□□ -0.84
CHD7-212ENST00000618450 RRS1Q15050 365 aaKnown RBP9.8□□□□□ -0.84
CHD7-212ENST00000618450 STAP2Q9UGK3 403 aa9.8□□□□□ -0.84
CHD7-212ENST00000618450 FOXD4L1Q9NU39 408 aa9.79□□□□□ -0.84
CHD7-212ENST00000618450 LMO7Q8WWI1 1683 aa9.79□□□□□ -0.84
CHD7-212ENST00000618450 ELL2O00472 640 aaPredicted RBP9.79□□□□□ -0.84
CHD7-212ENST00000618450 SMARCA5O60264 1052 aaPredicted RBP9.79□□□□□ -0.84
CHD7-212ENST00000618450 NUCB2P80303 420 aa9.79□□□□□ -0.84
CHD7-212ENST00000618450 NUDT16Q96DE0 195 aaKnown RBP9.79□□□□□ -0.84
CHD7-212ENST00000618450 PALD1Q9ULE6 856 aa9.79□□□□□ -0.84
CHD7-212ENST00000618450 PDE1AP54750 535 aa9.78□□□□□ -0.84
CHD7-212ENST00000618450 CAMTA1Q9Y6Y1 1673 aa9.78□□□□□ -0.84
CHD7-212ENST00000618450 PLEKHG3A1L390 1219 aa9.78□□□□□ -0.84
CHD7-212ENST00000618450 TPM2P07951 284 aa9.78□□□□□ -0.84
CHD7-212ENST00000618450 LRSAM1Q6UWE0 723 aa9.78□□□□□ -0.84
CHD7-212ENST00000618450 G2E3Q7L622 706 aa9.78□□□□□ -0.84
CHD7-212ENST00000618450 ARXQ96QS3 562 aa9.78□□□□□ -0.84
CHD7-212ENST00000618450 LMOD3Q0VAK6 560 aa9.77□□□□□ -0.85
CHD7-212ENST00000618450 TMEM87AQ8NBN3 555 aa9.77□□□□□ -0.85
CHD7-212ENST00000618450 CCDC61Q9Y6R9 512 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms