RNA–Protein interactions for RNA: ENST00000617649.4

ACACA-240, Transcript of acetyl-CoA carboxylase alpha, human

TSL 5 BASIC

Gene ACACA, Length 7,912 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-240	ENST00000617649	MYO6	Q9UM54	1294 aa		7.88	□□□□□ -1.15
ACACA-240	ENST00000617649	NOS1	P29475	1434 aa		7.88	□□□□□ -1.15
ACACA-240	ENST00000617649	NPHP3	Q7Z494	1330 aa		7.88	□□□□□ -1.15
ACACA-240	ENST00000617649	MPHOSPH10	O00566	681 aa	Known RBP	7.88	□□□□□ -1.15
ACACA-240	ENST00000617649	KRT32	Q14532	448 aa		7.88	□□□□□ -1.15
ACACA-240	ENST00000617649	KRT28	Q7Z3Y7	464 aa		7.88	□□□□□ -1.15
ACACA-240	ENST00000617649	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	7.88	□□□□□ -1.15	1e-6	■■■■■ 126.5
ACACA-240	ENST00000617649	HYPK	Q9NX55	129 aa		7.88	□□□□□ -1.15
ACACA-240	ENST00000617649	ANKIB1	Q9P2G1	1089 aa		7.88	□□□□□ -1.15
ACACA-240	ENST00000617649	ADGB	Q8N7X0	1667 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	SYCP1	Q15431	976 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	TAF7	Q15545	349 aa	Predicted RBP	7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	DEK	P35659	375 aa	Known RBP	7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	ATF7IP	Q6VMQ6	1270 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	AK7	Q96M32	723 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	RABEP1	Q15276	862 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	WASF1	Q92558	559 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	UBAC1	Q9BSL1	405 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	DNAJC5B	Q9UF47	199 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	NOL7	Q9UMY1	257 aa	Known RBP	7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	ABCA5	Q8WWZ7	1642 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	TTC21A	Q8NDW8	1320 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	IFIT1	P09914	478 aa	Known RBP	7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	STIM1	Q13586	685 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	RAI14	Q9P0K7	980 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	RAB11FIP3	O75154	756 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	FKBP4	Q02790	459 aa	Known RBP eCLIP	7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	AEBP1	Q8IUX7	1158 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	CYP46A1	Q9Y6A2	500 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	BICDL1	Q6ZP65	573 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	WAPL	Q7Z5K2	1190 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	AACS	Q86V21	672 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	SIL1	Q9H173	461 aa		7.87	□□□□□ -1.15
ACACA-240	ENST00000617649	KIN	O60870	393 aa	Known RBP	7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	DHX8	Q14562	1220 aa	Known RBP	7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	TNIP1	Q15025	636 aa		7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	SRGAP3	O43295	1099 aa		7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	SLC4A3	P48751	1232 aa		7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	ST5	P78524	1137 aa		7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	METTL24	Q5JXM2	366 aa		7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	GPATCH8	Q9UKJ3	1502 aa	Known RBP	7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	CDR1	P51861	262 aa		7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	TXLNB	Q8N3L3	684 aa		7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	FMNL2	Q96PY5	1086 aa		7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	NAP1L1	P55209	391 aa	Known RBP	7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	FOSB	P53539	338 aa		7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	FILIP1L	Q4L180	1135 aa		7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	SDF4	Q9BRK5	362 aa		7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	DACH1	Q9UI36	760 aa		7.86	□□□□□ -1.15
ACACA-240	ENST00000617649	CCAR2	Q8N163	923 aa	Known RBP	7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	SMARCE1	Q969G3	411 aa		7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	SLC5A1	P13866	664 aa		7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	DES	P17661	470 aa		7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	FOXO3	O43524	673 aa		7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	IDI1	Q13907	227 aa		7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	MPRIP	Q6WCQ1	1025 aa		7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	AIDA	Q96BJ3	306 aa		7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	ABCC2	Q92887	1545 aa		7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	LUC7L	Q9NQ29	371 aa	Known RBP	7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	UBAP1L	F5GYI3	381 aa		7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	TMPO	P42166	694 aa	Known RBP	7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	IFIT5	Q13325	482 aa	Known RBP	7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	MVP	Q14764	893 aa	Known RBP	7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	TSR2	Q969E8	191 aa	Known RBP	7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	SEC63	Q9UGP8	760 aa	Known RBP	7.85	□□□□□ -1.15
ACACA-240	ENST00000617649	HOMER1	Q86YM7	354 aa		7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	ANKRD36B	Q8N2N9	1353 aa		7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	IMMT	Q16891	758 aa	Known RBP	7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	PPP1R42	Q7Z4L9	355 aa		7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	DZIP1	Q86YF9	867 aa	Known RBP	7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	IFNL2	Q8IZJ0	200 aa		7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	CDC5L	Q99459	802 aa	Known RBP	7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	RIMS2	Q9UQ26	1411 aa		7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	ALDH1L2	Q3SY69	923 aa		7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	RPAP2	Q8IXW5	612 aa	Predicted RBP	7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	EHMT1	Q9H9B1	1298 aa		7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	TSPOAP1	O95153	1857 aa		7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	ATP10B	O94823	1461 aa		7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	ZFYVE27	Q5T4F4	411 aa		7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	BMP2K	Q9NSY1	1161 aa	Predicted RBP	7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	USP5	P45974	858 aa		7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	HSP90AB2P	Q58FF8	381 aa		7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	RTN4	Q9NQC3	1192 aa	Known RBP	7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	TRPM2	O94759	1503 aa		7.84	□□□□□ -1.15
ACACA-240	ENST00000617649	RALGAPB	Q86X10	1494 aa		7.84	□□□□□ -1.16
ACACA-240	ENST00000617649	PTCD1	O75127	700 aa	Known RBP	7.84	□□□□□ -1.16
ACACA-240	ENST00000617649	CCP110	O43303	1012 aa		7.83	□□□□□ -1.16
ACACA-240	ENST00000617649	RFC4	P35249	363 aa		7.83	□□□□□ -1.16
ACACA-240	ENST00000617649	ZNF76	P36508	570 aa		7.83	□□□□□ -1.16
ACACA-240	ENST00000617649	FBXO31	Q5XUX0	539 aa	Predicted RBP	7.83	□□□□□ -1.16
ACACA-240	ENST00000617649	SMARCC1	Q92922	1105 aa	Predicted RBP	7.83	□□□□□ -1.16
ACACA-240	ENST00000617649	KIF1BP	Q96EK5	621 aa		7.83	□□□□□ -1.16
ACACA-240	ENST00000617649	NUP160	Q12769	1436 aa		7.83	□□□□□ -1.16
ACACA-240	ENST00000617649	MBD3	O95983	291 aa		7.83	□□□□□ -1.16
ACACA-240	ENST00000617649	DUSP27	Q5VZP5	1158 aa		7.83	□□□□□ -1.16
ACACA-240	ENST00000617649	PTPRC	P08575	1304 aa		7.83	□□□□□ -1.16
ACACA-240	ENST00000617649	ANKRD18B	A2A2Z9	1011 aa		7.83	□□□□□ -1.16
ACACA-240	ENST00000617649	CEBPA	P49715	358 aa	Predicted RBP	7.83	□□□□□ -1.16
ACACA-240	ENST00000617649	MAP3K12	Q12852	859 aa		7.83	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms