RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 APLP1P51693 650 aa7.66□□□□□ -1.18
RFC3-203ENST00000616236 MSS51Q4VC12 460 aa7.66□□□□□ -1.18
RFC3-203ENST00000616236 C9orf131Q5VYM1 1079 aa7.66□□□□□ -1.18
RFC3-203ENST00000616236 FAM160A2Q8N612 972 aaPredicted RBP7.66□□□□□ -1.18
RFC3-203ENST00000616236 MAGEB6P1A0A0J9YX57 407 aa7.65□□□□□ -1.18
RFC3-203ENST00000616236 PTCD1O75127 700 aaKnown RBP7.65□□□□□ -1.18
RFC3-203ENST00000616236 P4HBP07237 508 aaKnown RBP7.65□□□□□ -1.18
RFC3-203ENST00000616236 CANXP27824 592 aaKnown RBP7.65□□□□□ -1.18
RFC3-203ENST00000616236 MMP16P51512 607 aa7.65□□□□□ -1.18
RFC3-203ENST00000616236 HDLBPQ00341 1268 aaKnown RBP7.65□□□□□ -1.18
RFC3-203ENST00000616236 MRPL58Q14197 206 aaKnown RBP7.65□□□□□ -1.18
RFC3-203ENST00000616236 NAA30Q147X3 362 aaPredicted RBP7.65□□□□□ -1.18
RFC3-203ENST00000616236 MRPL50Q8N5N7 158 aaKnown RBP7.65□□□□□ -1.18
RFC3-203ENST00000616236 TSEN2Q8NCE0 465 aaKnown RBP7.65□□□□□ -1.18
RFC3-203ENST00000616236 GAS2L2Q8NHY3 880 aa7.65□□□□□ -1.18
RFC3-203ENST00000616236 SPATA32Q96LK8 384 aa7.65□□□□□ -1.18
RFC3-203ENST00000616236 SCAMP3O14828 347 aaKnown RBP7.64□□□□□ -1.19
RFC3-203ENST00000616236 PPP4CP60510 307 aa7.64□□□□□ -1.19
RFC3-203ENST00000616236 USP4Q13107 963 aa7.64□□□□□ -1.19
RFC3-203ENST00000616236 VARS2Q5ST30 1063 aaKnown RBP7.64□□□□□ -1.19
RFC3-203ENST00000616236 RNF20Q5VTR2 975 aa7.64□□□□□ -1.19
RFC3-203ENST00000616236 HELQQ8TDG4 1101 aa7.64□□□□□ -1.19
RFC3-203ENST00000616236 PRDM9Q9NQV7 894 aa7.64□□□□□ -1.19
RFC3-203ENST00000616236 ERBB3P21860 1342 aa7.63□□□□□ -1.19
RFC3-203ENST00000616236 PBX2P40425 430 aa7.63□□□□□ -1.19
RFC3-203ENST00000616236 PTCRAQ6ISU1 281 aaPredicted RBP7.63□□□□□ -1.19
RFC3-203ENST00000616236 MAMSTRQ6ZN01 415 aa7.63□□□□□ -1.19
RFC3-203ENST00000616236 TMC7Q7Z402 723 aa7.63□□□□□ -1.19
RFC3-203ENST00000616236 UNC93B1Q9H1C4 597 aa7.63□□□□□ -1.19
RFC3-203ENST00000616236 PCDHB11Q9Y5F2 797 aa7.63□□□□□ -1.19
RFC3-203ENST00000616236 M0R2N6 131 aa7.62□□□□□ -1.19
RFC3-203ENST00000616236 PPM1GO15355 546 aaPredicted RBP7.62□□□□□ -1.19
RFC3-203ENST00000616236 FAM13AO94988 1023 aa7.62□□□□□ -1.19
RFC3-203ENST00000616236 LDLRAD1Q5T700 205 aa7.62□□□□□ -1.19
RFC3-203ENST00000616236 SPSB2Q99619 263 aa7.62□□□□□ -1.19
RFC3-203ENST00000616236 RBCK1Q9BYM8 510 aa7.62□□□□□ -1.19
RFC3-203ENST00000616236 HPS5Q9UPZ3 1129 aa7.62□□□□□ -1.19
RFC3-203ENST00000616236 NPR3P17342 541 aa7.61□□□□□ -1.19
RFC3-203ENST00000616236 ERFEQ4G0M1 354 aa7.61□□□□□ -1.19
RFC3-203ENST00000616236 SH3RF1Q7Z6J0 888 aa7.61□□□□□ -1.19
RFC3-203ENST00000616236 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.61□□□□□ -1.19
RFC3-203ENST00000616236 PIK3R5Q8WYR1 880 aa7.61□□□□□ -1.19
RFC3-203ENST00000616236 COL26A1Q96A83 441 aa7.61□□□□□ -1.19
RFC3-203ENST00000616236 CADPSQ9ULU8 1353 aa7.6□□□□□ -1.19
RFC3-203ENST00000616236 CCDC24Q8N4L8 307 aa7.6□□□□□ -1.19
RFC3-203ENST00000616236 TREHO43280 583 aa7.59□□□□□ -1.19
RFC3-203ENST00000616236 RAD51AP2Q09MP3 1159 aa7.59□□□□□ -1.19
RFC3-203ENST00000616236 NBPF20Q3BBV1 942 aa7.59□□□□□ -1.19
RFC3-203ENST00000616236 TMEM87AQ8NBN3 555 aa7.59□□□□□ -1.19
RFC3-203ENST00000616236 FAM161BQ96MY7 647 aa7.59□□□□□ -1.19
RFC3-203ENST00000616236 ESPNB1AK53 854 aa7.58□□□□□ -1.2
RFC3-203ENST00000616236 TK2O00142 265 aa7.58□□□□□ -1.2
RFC3-203ENST00000616236 NDUFB5O43674 189 aa7.58□□□□□ -1.2
RFC3-203ENST00000616236 IGFBP4P22692 258 aa7.58□□□□□ -1.2
RFC3-203ENST00000616236 MPSTP25325 297 aa7.58□□□□□ -1.2
RFC3-203ENST00000616236 BCAMP50895 628 aa7.58□□□□□ -1.2
RFC3-203ENST00000616236 XPCQ01831 940 aaPredicted RBP7.58□□□□□ -1.2
RFC3-203ENST00000616236 FMR1Q06787 632 aaKnown RBP eCLIP7.58□□□□□ -1.2
RFC3-203ENST00000616236 AGERQ15109 404 aa7.58□□□□□ -1.2
RFC3-203ENST00000616236 ANKK1Q8NFD2 765 aa7.58□□□□□ -1.2
RFC3-203ENST00000616236 TMC1Q8TDI8 760 aa7.58□□□□□ -1.2
RFC3-203ENST00000616236 FOXJ1Q92949 421 aa7.58□□□□□ -1.2
RFC3-203ENST00000616236 SLC10A4Q96EP9 437 aa7.58□□□□□ -1.2
RFC3-203ENST00000616236 ZNF358Q9NW07 568 aa7.58□□□□□ -1.2
RFC3-203ENST00000616236 PARP2Q9UGN5 583 aa7.58□□□□□ -1.2
RFC3-203ENST00000616236 SOWAHBA6NEL2 793 aa7.57□□□□□ -1.2
RFC3-203ENST00000616236 FOXO3O43524 673 aa7.57□□□□□ -1.2
RFC3-203ENST00000616236 LDHBP07195 334 aaKnown RBP7.57□□□□□ -1.2
RFC3-203ENST00000616236 MAPK8P45983 427 aa7.57□□□□□ -1.2
RFC3-203ENST00000616236 PLCB3Q01970 1234 aa7.57□□□□□ -1.2
RFC3-203ENST00000616236 C4orf48Q5BLP8 95 aa7.57□□□□□ -1.2
RFC3-203ENST00000616236 DPH6Q7L8W6 267 aa7.57□□□□□ -1.2
RFC3-203ENST00000616236 METTL16Q86W50 562 aaKnown RBP7.57□□□□□ -1.2
RFC3-203ENST00000616236 BPHLQ86WA6 291 aaPredicted RBP7.57□□□□□ -1.2
RFC3-203ENST00000616236 NT5DC4Q86YG4 428 aa7.57□□□□□ -1.2
RFC3-203ENST00000616236 BAP1Q92560 729 aa7.57□□□□□ -1.2
RFC3-203ENST00000616236 TSR3Q9UJK0 312 aaKnown RBP7.57□□□□□ -1.2
RFC3-203ENST00000616236 BRPF3Q9ULD4 1205 aa7.57□□□□□ -1.2
RFC3-203ENST00000616236 PRPF40AO75400 957 aaKnown RBP7.56□□□□□ -1.2
RFC3-203ENST00000616236 LINC01559Q495D7 138 aa7.56□□□□□ -1.2
RFC3-203ENST00000616236 SCG3Q8WXD2 468 aaKnown RBP7.56□□□□□ -1.2
RFC3-203ENST00000616236 DUSP9Q99956 384 aaKnown RBP7.56□□□□□ -1.2
RFC3-203ENST00000616236 TANGO6Q9C0B7 1094 aa7.56□□□□□ -1.2
RFC3-203ENST00000616236 RNF19AQ9NV58 838 aa7.56□□□□□ -1.2
RFC3-203ENST00000616236 MYCP01106 439 aaPredicted RBP7.55□□□□□ -1.2
RFC3-203ENST00000616236 COPS2P61201 443 aa7.55□□□□□ -1.2
RFC3-203ENST00000616236 DSC3Q14574 896 aa7.55□□□□□ -1.2
RFC3-203ENST00000616236 GIMAP6Q6P9H5 292 aa7.55□□□□□ -1.2
RFC3-203ENST00000616236 SEPT12Q8IYM1 358 aa7.55□□□□□ -1.2
RFC3-203ENST00000616236 ZNF687Q8N1G0 1237 aa7.55□□□□□ -1.2
RFC3-203ENST00000616236 CITED4Q96RK1 184 aa7.55□□□□□ -1.2
RFC3-203ENST00000616236 SAP130Q9H0E3 1048 aa7.55□□□□□ -1.2
RFC3-203ENST00000616236 MRS2Q9HD23 443 aa7.55□□□□□ -1.2
RFC3-203ENST00000616236 CCDC87Q9NVE4 849 aa7.55□□□□□ -1.2
RFC3-203ENST00000616236 GOLGA8CPA6NN73 597 aa7.54□□□□□ -1.2
RFC3-203ENST00000616236 TMEM229AB2RXF0 380 aa7.54□□□□□ -1.2
RFC3-203ENST00000616236 RAB15P59190 212 aa7.54□□□□□ -1.2
RFC3-203ENST00000616236 EHHADHQ08426 723 aa7.54□□□□□ -1.2
RFC3-203ENST00000616236 TNS4Q8IZW8 715 aa7.54□□□□□ -1.2
RFC3-203ENST00000616236 VTI1AQ96AJ9 217 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms