RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 EMILIN1Q9Y6C2 1016 aa11.25□□□□□ -0.61
VPS11-206ENST00000614944 WDR63Q8IWG1 891 aa11.25□□□□□ -0.61
VPS11-206ENST00000614944 RRAGDQ9NQL2 400 aaPredicted RBP11.25□□□□□ -0.61
VPS11-206ENST00000614944 ADAMTS7Q9UKP4 1686 aa11.25□□□□□ -0.61
VPS11-206ENST00000614944 ARHGEF25Q86VW2 580 aa11.25□□□□□ -0.61
VPS11-206ENST00000614944 HOXC9P31274 260 aa11.24□□□□□ -0.61
VPS11-206ENST00000614944 PHLPP1O60346 1717 aa11.24□□□□□ -0.61
VPS11-206ENST00000614944 FOXO3O43524 673 aa11.24□□□□□ -0.61
VPS11-206ENST00000614944 LAS1LQ9Y4W2 734 aaKnown RBP11.24□□□□□ -0.61
VPS11-206ENST00000614944 COL14A1Q05707 1796 aaKnown RBP11.24□□□□□ -0.61
VPS11-206ENST00000614944 RNF123Q5XPI4 1314 aa11.24□□□□□ -0.61
VPS11-206ENST00000614944 TNNT2P45379 298 aaPredicted RBP11.24□□□□□ -0.61
VPS11-206ENST00000614944 EIF4A2Q14240 407 aaKnown RBP11.24□□□□□ -0.61
VPS11-206ENST00000614944 FRAT1Q92837 279 aaPredicted RBP11.24□□□□□ -0.61
VPS11-206ENST00000614944 GCP02774 474 aa11.22□□□□□ -0.61
VPS11-206ENST00000614944 TMEM51Q9NW97 253 aa11.22□□□□□ -0.61
VPS11-206ENST00000614944 PLCH1Q4KWH8 1693 aa11.22□□□□□ -0.61
VPS11-206ENST00000614944 RGPD5Q99666 1765 aa11.22□□□□□ -0.61
VPS11-206ENST00000614944 PKD1L3Q7Z443 1732 aa11.22□□□□□ -0.61
VPS11-206ENST00000614944 WWC1Q8IX03 1113 aa11.22□□□□□ -0.61
VPS11-206ENST00000614944 OVOS2A0A0G2JMS6 1433 aa11.22□□□□□ -0.61
VPS11-206ENST00000614944 U2AF1L5P0DN76 240 aaPredicted RBP11.22□□□□□ -0.61
VPS11-206ENST00000614944 U2AF1Q01081 240 aaKnown RBP eCLIP11.22□□□□□ -0.61
VPS11-206ENST00000614944 RRS1Q15050 365 aaKnown RBP11.21□□□□□ -0.61
VPS11-206ENST00000614944 PARP4Q9UKK3 1724 aaKnown RBP11.21□□□□□ -0.62
VPS11-206ENST00000614944 E9PSI1 815 aa11.2□□□□□ -0.62
VPS11-206ENST00000614944 TCP11L2Q8N4U5 519 aa11.2□□□□□ -0.62
VPS11-206ENST00000614944 KCNG1Q9UIX4 513 aa11.2□□□□□ -0.62
VPS11-206ENST00000614944 NWD2Q9ULI1 1742 aa11.2□□□□□ -0.62
VPS11-206ENST00000614944 RGPD2P0DJD1 1756 aa11.2□□□□□ -0.62
VPS11-206ENST00000614944 HTATSF1O43719 755 aaKnown RBP11.2□□□□□ -0.62
VPS11-206ENST00000614944 GOLGA2Q08379 1002 aa11.2□□□□□ -0.62
VPS11-206ENST00000614944 SLFN5Q08AF3 891 aa11.2□□□□□ -0.62
VPS11-206ENST00000614944 AMPHP49418 695 aa11.19□□□□□ -0.62
VPS11-206ENST00000614944 LMOD3Q0VAK6 560 aa11.19□□□□□ -0.62
VPS11-206ENST00000614944 PPP4R2Q9NY27 417 aa11.19□□□□□ -0.62
VPS11-206ENST00000614944 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
VPS11-206ENST00000614944 VGLL3A8MV65 326 aa11.19□□□□□ -0.62
VPS11-206ENST00000614944 APAF1O14727 1248 aa11.19□□□□□ -0.62
VPS11-206ENST00000614944 TMPOP42166 694 aaKnown RBP11.19□□□□□ -0.62
VPS11-206ENST00000614944 PRDM10Q9NQV6 1147 aa11.19□□□□□ -0.62
VPS11-206ENST00000614944 MAPK8IP3Q9UPT6 1336 aa11.19□□□□□ -0.62
VPS11-206ENST00000614944 CT47B1P0C2W7 299 aaPredicted RBP11.19□□□□□ -0.62
VPS11-206ENST00000614944 NFE2L2Q16236 605 aa11.19□□□□□ -0.62
VPS11-206ENST00000614944 SMAP1Q8IYB5 467 aaPredicted RBP11.19□□□□□ -0.62
VPS11-206ENST00000614944 HSP90AB2PQ58FF8 381 aa11.18□□□□□ -0.62
VPS11-206ENST00000614944 NRAPQ86VF7 1730 aa11.17□□□□□ -0.62
VPS11-206ENST00000614944 RGS22Q8NE09 1264 aa11.17□□□□□ -0.62
VPS11-206ENST00000614944 ZHX1Q9UKY1 873 aaPredicted RBP11.17□□□□□ -0.62
VPS11-206ENST00000614944 DDRGK1Q96HY6 314 aa11.17□□□□□ -0.62
VPS11-206ENST00000614944 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
VPS11-206ENST00000614944 TOM1O60784 492 aa11.17□□□□□ -0.62
VPS11-206ENST00000614944 LRRC59Q96AG4 307 aaKnown RBP11.17□□□□□ -0.62
VPS11-206ENST00000614944 VIRMAQ69YN4 1812 aaKnown RBP11.16□□□□□ -0.62
VPS11-206ENST00000614944 SIPA1L3O60292 1781 aaPredicted RBP11.16□□□□□ -0.62
VPS11-206ENST00000614944 DUSP27Q5VZP5 1158 aa11.16□□□□□ -0.62
VPS11-206ENST00000614944 PRKAR2BP31323 418 aa11.16□□□□□ -0.62
VPS11-206ENST00000614944 TRIM35Q9UPQ4 493 aa11.16□□□□□ -0.62
VPS11-206ENST00000614944 FBLN1P23142 703 aa11.16□□□□□ -0.62
VPS11-206ENST00000614944 EYA1Q99502 592 aa11.16□□□□□ -0.62
VPS11-206ENST00000614944 BABAM1Q9NWV8 329 aa11.16□□□□□ -0.62
VPS11-206ENST00000614944 CCDC9Q9Y3X0 531 aaKnown RBP11.16□□□□□ -0.62
VPS11-206ENST00000614944 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.15□□□□□ -0.62
VPS11-206ENST00000614944 CLCN1P35523 988 aa11.15□□□□□ -0.62
VPS11-206ENST00000614944 CCDC146Q8IYE0 955 aa11.15□□□□□ -0.62
VPS11-206ENST00000614944 IRX3P78415 501 aaPredicted RBP11.15□□□□□ -0.62
VPS11-206ENST00000614944 ERBB3P21860 1342 aa11.15□□□□□ -0.63
VPS11-206ENST00000614944 TPM2P07951 284 aa11.14□□□□□ -0.63
VPS11-206ENST00000614944 COL5A2P05997 1499 aaPredicted RBP11.14□□□□□ -0.63
VPS11-206ENST00000614944 GAS2L2Q8NHY3 880 aa11.14□□□□□ -0.63
VPS11-206ENST00000614944 MYH16Q9H6N6 1097 aa11.14□□□□□ -0.63
VPS11-206ENST00000614944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.14□□□□□ -0.63
VPS11-206ENST00000614944 KDM3BQ7LBC6 1761 aa11.13□□□□□ -0.63
VPS11-206ENST00000614944 ZNF853P0CG23 659 aa11.13□□□□□ -0.63
VPS11-206ENST00000614944 ZNF428Q96B54 188 aa11.13□□□□□ -0.63
VPS11-206ENST00000614944 SCN11AQ9UI33 1791 aa11.13□□□□□ -0.63
VPS11-206ENST00000614944 MRC1P22897 1456 aa11.13□□□□□ -0.63
VPS11-206ENST00000614944 SULT6B1Q6IMI4 303 aa11.13□□□□□ -0.63
VPS11-206ENST00000614944 SOS1Q07889 1333 aaPredicted RBP11.12□□□□□ -0.63
VPS11-206ENST00000614944 IFT57Q9NWB7 429 aa11.12□□□□□ -0.63
VPS11-206ENST00000614944 SHANK3Q9BYB0 1731 aa11.12□□□□□ -0.63
VPS11-206ENST00000614944 XPCQ01831 940 aaPredicted RBP11.12□□□□□ -0.63
VPS11-206ENST00000614944 AMOTQ4VCS5 1084 aa11.12□□□□□ -0.63
VPS11-206ENST00000614944 CRB1P82279 1406 aa11.12□□□□□ -0.63
VPS11-206ENST00000614944 KIAA0232Q92628 1395 aa11.12□□□□□ -0.63
VPS11-206ENST00000614944 RIPK4P57078 832 aa11.11□□□□□ -0.63
VPS11-206ENST00000614944 PPP4R3BQ5MIZ7 849 aa11.11□□□□□ -0.63
VPS11-206ENST00000614944 NUTM2GQ5VZR2 741 aa11.11□□□□□ -0.63
VPS11-206ENST00000614944 UTP14CQ5TAP6 766 aaKnown RBP11.11□□□□□ -0.63
VPS11-206ENST00000614944 ANKRD24Q8TF21 1146 aa11.11□□□□□ -0.63
VPS11-206ENST00000614944 PHACTR3Q96KR7 559 aa11.11□□□□□ -0.63
VPS11-206ENST00000614944 LRP6O75581 1613 aa11.11□□□□□ -0.63
VPS11-206ENST00000614944 CLGNO14967 610 aa11.11□□□□□ -0.63
VPS11-206ENST00000614944 CEMIPQ8WUJ3 1361 aa11.1□□□□□ -0.63
VPS11-206ENST00000614944 TICAM2Q86XR7 235 aa11.1□□□□□ -0.63
VPS11-206ENST00000614944 ANP32BQ92688 251 aaKnown RBP11.1□□□□□ -0.63
VPS11-206ENST00000614944 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.1□□□□□ -0.63
VPS11-206ENST00000614944 BRPF1P55201 1214 aaPredicted RBP11.1□□□□□ -0.63
VPS11-206ENST00000614944 FAM193AP78312 1265 aa11.1□□□□□ -0.63
VPS11-206ENST00000614944 DDX17Q92841 729 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms