RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PIK3C2AO00443 1686 aa4.38□□□□□ -1.71
LIG4-205ENST00000614526 CHL1O00533 1208 aa4.38□□□□□ -1.71
LIG4-205ENST00000614526 IPO8O15397 1037 aaKnown RBP4.38□□□□□ -1.71
LIG4-205ENST00000614526 SLC4A2P04920 1241 aa4.38□□□□□ -1.71
LIG4-205ENST00000614526 EIF2S2P20042 333 aaKnown RBP4.38□□□□□ -1.71
LIG4-205ENST00000614526 GAS2L2Q8NHY3 880 aa4.38□□□□□ -1.71
LIG4-205ENST00000614526 USP35Q9P2H5 1018 aa4.38□□□□□ -1.71
LIG4-205ENST00000614526 F6X3S4 739 aa4.37□□□□□ -1.71
LIG4-205ENST00000614526 KCNQ3O43525 872 aa4.37□□□□□ -1.71
LIG4-205ENST00000614526 ZNF530Q6P9A1 599 aaPredicted RBP4.37□□□□□ -1.71
LIG4-205ENST00000614526 G2E3Q7L622 706 aa4.37□□□□□ -1.71
LIG4-205ENST00000614526 SLAIN2Q9P270 581 aa4.37□□□□□ -1.71
LIG4-205ENST00000614526 MSH6P52701 1360 aa4.37□□□□□ -1.71
LIG4-205ENST00000614526 NRKQ7Z2Y5 1582 aa4.37□□□□□ -1.71
LIG4-205ENST00000614526 ZNF142P52746 1687 aaPredicted RBP4.37□□□□□ -1.71
LIG4-205ENST00000614526 FMN2Q9NZ56 1722 aa4.37□□□□□ -1.71
LIG4-205ENST00000614526 NCBP3Q53F19 620 aaKnown RBP4.37□□□□□ -1.71
LIG4-205ENST00000614526 BRINP3Q76B58 766 aa4.37□□□□□ -1.71
LIG4-205ENST00000614526 ARHGEF10O15013 1369 aa4.37□□□□□ -1.71
LIG4-205ENST00000614526 APBB1O00213 710 aa4.37□□□□□ -1.71
LIG4-205ENST00000614526 ANXA1P04083 346 aa4.37□□□□□ -1.71
LIG4-205ENST00000614526 CT47B1P0C2W7 299 aaPredicted RBP4.37□□□□□ -1.71
LIG4-205ENST00000614526 KIF16BQ96L93 1317 aa4.37□□□□□ -1.71
LIG4-205ENST00000614526 MSH5O43196 834 aa4.36□□□□□ -1.71
LIG4-205ENST00000614526 ALDH1L2Q3SY69 923 aa4.36□□□□□ -1.71
LIG4-205ENST00000614526 STRN4Q9NRL3 753 aa4.36□□□□□ -1.71
LIG4-205ENST00000614526 DDX19BQ9UMR2 479 aa4.36□□□□□ -1.71
LIG4-205ENST00000614526 PDZRN3Q9UPQ7 1066 aa4.36□□□□□ -1.71
LIG4-205ENST00000614526 NPHP3Q7Z494 1330 aa4.36□□□□□ -1.71
LIG4-205ENST00000614526 TEFQ10587 303 aa4.36□□□□□ -1.71
LIG4-205ENST00000614526 RWDD1Q9H446 243 aaPredicted RBP4.36□□□□□ -1.71
LIG4-205ENST00000614526 MST1RQ04912 1400 aa4.36□□□□□ -1.71
LIG4-205ENST00000614526 TAF7Q15545 349 aaPredicted RBP4.36□□□□□ -1.71
LIG4-205ENST00000614526 C1orf141Q5JVX7 400 aa4.36□□□□□ -1.71
LIG4-205ENST00000614526 KDRP35968 1356 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 MS4A1P11836 297 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 SLC39A6Q13433 755 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 PLEKHO1Q53GL0 409 aaPredicted RBP4.35□□□□□ -1.71
LIG4-205ENST00000614526 RAPGEF4Q8WZA2 1011 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 BACH2Q9BYV9 841 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 PRDM11Q9NQV5 511 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 ZBTB40Q9NUA8 1239 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 PRAMEF22A3QJZ6 481 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 FKBP5Q13451 457 aaPredicted RBP4.35□□□□□ -1.71
LIG4-205ENST00000614526 LNPKQ9C0E8 428 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 LMTK3Q96Q04 1460 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 CRB1P82279 1406 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 KIAA0232Q92628 1395 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 MAP3K5Q99683 1374 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 BTBD11A6QL63 1104 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 ZBTB7BO15156 539 aaPredicted RBP4.35□□□□□ -1.71
LIG4-205ENST00000614526 STK31Q9BXU1 1019 aa4.35□□□□□ -1.71
LIG4-205ENST00000614526 PHAXQ9H814 394 aaKnown RBP4.35□□□□□ -1.71
LIG4-205ENST00000614526 ERBB3P21860 1342 aa4.34□□□□□ -1.71
LIG4-205ENST00000614526 DLG5Q8TDM6 1919 aa4.34□□□□□ -1.71
LIG4-205ENST00000614526 PIP4K2AP48426 406 aaPredicted RBP4.34□□□□□ -1.71
LIG4-205ENST00000614526 TOM1L2Q6ZVM7 507 aa4.34□□□□□ -1.71
LIG4-205ENST00000614526 STRCP1A6NGW2 1772 aa4.34□□□□□ -1.71
LIG4-205ENST00000614526 SPATA31A3Q5VYP0 1347 aa4.34□□□□□ -1.71
LIG4-205ENST00000614526 ANP32AP39687 249 aaKnown RBP4.34□□□□□ -1.71
LIG4-205ENST00000614526 SLC4A3P48751 1232 aa4.34□□□□□ -1.71
LIG4-205ENST00000614526 PIP4K2BP78356 416 aa4.34□□□□□ -1.71
LIG4-205ENST00000614526 HDGFL1Q5TGJ6 251 aa4.34□□□□□ -1.71
LIG4-205ENST00000614526 ANKRD45Q5TZF3 282 aa4.34□□□□□ -1.71
LIG4-205ENST00000614526 MEIS3Q99687 375 aa4.34□□□□□ -1.71
LIG4-205ENST00000614526 API5Q9BZZ5 524 aaKnown RBP4.34□□□□□ -1.71
LIG4-205ENST00000614526 USP19O94966 1318 aa4.34□□□□□ -1.72
LIG4-205ENST00000614526 SEC24BO95487 1268 aa4.34□□□□□ -1.72
LIG4-205ENST00000614526 EVA1CP58658 441 aa4.34□□□□□ -1.72
LIG4-205ENST00000614526 ERICH6Q7L0X2 663 aa4.34□□□□□ -1.72
LIG4-205ENST00000614526 NFATC2IPQ8NCF5 419 aa4.34□□□□□ -1.72
LIG4-205ENST00000614526 DDX54Q8TDD1 881 aaKnown RBP4.34□□□□□ -1.72
LIG4-205ENST00000614526 A0A0G2JS52 829 aa4.33□□□□□ -1.72
LIG4-205ENST00000614526 RNMTO43148 476 aaKnown RBP4.33□□□□□ -1.72
LIG4-205ENST00000614526 TATP17735 454 aaPredicted RBP4.33□□□□□ -1.72
LIG4-205ENST00000614526 AIMP1Q12904 312 aaKnown RBP4.33□□□□□ -1.72
LIG4-205ENST00000614526 AKAP4Q5JQC9 854 aa4.33□□□□□ -1.72
LIG4-205ENST00000614526 SIRT2Q8IXJ6 389 aa4.33□□□□□ -1.72
LIG4-205ENST00000614526 FLIIQ13045 1269 aa4.33□□□□□ -1.72
LIG4-205ENST00000614526 C8orf34Q49A92 452 aa4.33□□□□□ -1.72
LIG4-205ENST00000614526 CCDC30Q5VVM6 783 aa4.33□□□□□ -1.72
LIG4-205ENST00000614526 CHPF2Q9P2E5 772 aa4.33□□□□□ -1.72
LIG4-205ENST00000614526 NFAT5O94916 1531 aa4.33□□□□□ -1.72
LIG4-205ENST00000614526 NWD1Q149M9 1564 aa4.33□□□□□ -1.72
LIG4-205ENST00000614526 FAM161AQ3B820 660 aa4.33□□□□□ -1.72
LIG4-205ENST00000614526 ARHGAP45Q92619 1136 aa4.33□□□□□ -1.72
LIG4-205ENST00000614526 RTL1A6NKG5 1358 aa4.33□□□□□ -1.72
LIG4-205ENST00000614526 KIF24Q5T7B8 1368 aa4.33□□□□□ -1.72
LIG4-205ENST00000614526 ABCC4O15439 1325 aa4.32□□□□□ -1.72
LIG4-205ENST00000614526 HTATSF1O43719 755 aaKnown RBP4.32□□□□□ -1.72
LIG4-205ENST00000614526 SMARCA5O60264 1052 aaPredicted RBP4.32□□□□□ -1.72
LIG4-205ENST00000614526 ADAMTS2O95450 1211 aa4.32□□□□□ -1.72
LIG4-205ENST00000614526 EIF4A1P60842 406 aaKnown RBP4.32□□□□□ -1.72
LIG4-205ENST00000614526 AMOTQ4VCS5 1084 aa4.32□□□□□ -1.72
LIG4-205ENST00000614526 LARP1Q6PKG0 1096 aaKnown RBP4.32□□□□□ -1.72
LIG4-205ENST00000614526 PXDNQ92626 1479 aa4.32□□□□□ -1.72
LIG4-205ENST00000614526 MARF1Q9Y4F3 1742 aaKnown RBP4.32□□□□□ -1.72
LIG4-205ENST00000614526 LTN1O94822 1766 aa4.32□□□□□ -1.72
LIG4-205ENST00000614526 NUTM2BA6NNL0 878 aaPredicted RBP4.32□□□□□ -1.72
LIG4-205ENST00000614526 NUTM2EB1AL46 878 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms