RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 GLIPR1L2Q4G1C9 344 aa13.65□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 MST1RQ04912 1400 aa13.65□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 ZMYND15Q9H091 742 aa13.65□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 CACNA1FO60840 1977 aa13.65□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 IGSF1Q8N6C5 1336 aa13.65□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 FBLN1P23142 703 aa13.65□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 NUCB1Q02818 461 aa13.65□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 FAM43AQ8N2R8 423 aa13.65□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 BABAM1Q9NWV8 329 aa13.65□□□□□ -0.22
SENP3-EIF4A1-201ENST00000614237 RRS1Q15050 365 aaKnown RBP13.64□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 HMOX1P09601 288 aa13.64□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 API5Q9BZZ5 524 aaKnown RBP13.64□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 RGS12O14924 1447 aa13.64□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 CAMTA1Q9Y6Y1 1673 aa13.63□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 HSP90AA1P07900 732 aaKnown RBP13.63□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 BECN1Q14457 450 aa13.63□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 CEBPAP49715 358 aaPredicted RBP13.63□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 INTS3Q68E01 1043 aaKnown RBP13.63□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 TBC1D32Q96NH3 1257 aa13.63□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 NFAT5O94916 1531 aa13.62□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 SETD1BQ9UPS6 1966 aaKnown RBP13.62□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 MFAP1P55081 439 aaKnown RBP13.62□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 TWISTNBQ3B726 338 aaPredicted RBP13.62□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 ITPRIPQ8IWB1 547 aa13.62□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 MED1Q15648 1581 aaPredicted RBP13.62□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 UPF2Q9HAU5 1272 aaKnown RBP13.62□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 PTPRCP08575 1304 aa13.62□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 NCAPD2Q15021 1401 aa13.62□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 GOLGA6L3A6NEY3 463 aa13.61□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 LTN1O94822 1766 aa13.61□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 FAM208AQ9UK61 1670 aaKnown RBP13.61□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 MAP3K19Q56UN5 1328 aa13.61□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 SLC26A8Q96RN1 970 aa13.6□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 TPRNQ4KMQ1 711 aa13.6□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 TSPYL6Q8N831 410 aa13.6□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 ADGRL3Q9HAR2 1447 aa13.6□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 SLIT3O75094 1523 aa13.59□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 C8orf58Q8NAV2 365 aa13.59□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 SULT6B1Q6IMI4 303 aa13.59□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 LMO7Q8WWI1 1683 aa13.59□□□□□ -0.23
SENP3-EIF4A1-201ENST00000614237 KIF1AQ12756 1690 aa13.58□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 TRPM3Q9HCF6 1732 aaPredicted RBP13.58□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 XRCC6P12956 609 aaKnown RBP eCLIP13.57□□□□□ -0.241e-6■■■□□ 17.2
SENP3-EIF4A1-201ENST00000614237 HSP90AB2PQ58FF8 381 aa13.57□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 GAS2L2Q8NHY3 880 aa13.57□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 TRIM44Q96DX7 344 aaPredicted RBP13.57□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 PXDNLA1KZ92 1463 aa13.57□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 ABCC6O95255 1503 aa13.57□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 ADAMTS7Q9UKP4 1686 aa13.57□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 BMP2KLQ5H9B9 411 aa13.56□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 CHD1LQ86WJ1 897 aa13.56□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 AEBP1Q8IUX7 1158 aa13.56□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 PLEKHG2Q9H7P9 1386 aa13.56□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 OVOS2A0A0G2JMS6 1433 aa13.56□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 KDM3BQ7LBC6 1761 aa13.56□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 RBM10P98175 930 aaKnown RBP13.56□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 THUMPD2Q9BTF0 503 aaKnown RBP13.56□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 ATP10DQ9P241 1426 aa13.55□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 KCNA6P17658 529 aa13.55□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 NCLP19338 710 aaKnown RBP13.55□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 L1TD1Q5T7N2 865 aaKnown RBP13.55□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 ANKLE2Q86XL3 938 aa13.55□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 RBM25P49756 843 aaKnown RBP13.54□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 FAM83GA6ND36 823 aa13.54□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 SIRT2Q8IXJ6 389 aa13.54□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 HOXC9P31274 260 aa13.53□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 RPAP2Q8IXW5 612 aaPredicted RBP13.53□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 NGDNQ8NEJ9 315 aaKnown RBP13.53□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 EYA1Q99502 592 aa13.53□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 DCTPP1Q9H773 170 aa13.53□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 MTHFSDQ2M296 383 aaKnown RBP13.52□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 TUBGCP6Q96RT7 1819 aa13.52□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 NCOA3Q9Y6Q9 1424 aa13.52□□□□□ -0.24
SENP3-EIF4A1-201ENST00000614237 ANTXR1Q9H6X2 564 aa13.52□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 CEMIPQ8WUJ3 1361 aa13.52□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 TBC1D2Q9BYX2 928 aa13.52□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 NPHP4O75161 1426 aaPredicted RBP13.51□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 ANKRD44Q8N8A2 993 aa13.51□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 MSH6P52701 1360 aa13.51□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 SIPA1L3O60292 1781 aaPredicted RBP13.51□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 A0A0U1RQG5 324 aaPredicted RBP13.5□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 ALS2Q96Q42 1657 aa13.5□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 MAP3K5Q99683 1374 aa13.5□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 TRAK2O60296 914 aa13.5□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 SNX21Q969T3 373 aa13.5□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 IBTKQ9P2D0 1353 aaPredicted RBP13.5□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 IP6K1Q92551 441 aa13.5□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 PHF8Q9UPP1 1060 aa13.49□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 DCTN1Q14203 1278 aa13.49□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 KCNH5Q8NCM2 988 aa13.48□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 HOXB7P09629 217 aa13.48□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 AMPHP49418 695 aa13.48□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 CCT4P50991 539 aaKnown RBP13.48□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 C22orf23Q9BZE7 217 aa13.48□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 GNAT3A8MTJ3 354 aa13.48□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 MCM10Q7L590 875 aa13.48□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 NLRP6P59044 892 aa13.47□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 MPNDQ8N594 471 aa13.47□□□□□ -0.25
SENP3-EIF4A1-201ENST00000614237 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms