RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 SLKQ9H2G2 1235 aaPredicted RBP27.68■■■□□ 2.02
POLR2J3-220ENST00000613744 IGHDP01880 384 aa27.66■■■□□ 2.02
POLR2J3-220ENST00000613744 PRDM11Q9NQV5 511 aa27.66■■■□□ 2.02
POLR2J3-220ENST00000613744 PEAK1Q9H792 1746 aa27.66■■■□□ 2.02
POLR2J3-220ENST00000613744 E9PSI1 815 aa27.66■■■□□ 2.02
POLR2J3-220ENST00000613744 HSP90AB2PQ58FF8 381 aa27.66■■■□□ 2.02
POLR2J3-220ENST00000613744 MCM4P33991 863 aa27.65■■■□□ 2.02
POLR2J3-220ENST00000613744 AXIN2Q9Y2T1 843 aa27.64■■■□□ 2.02
POLR2J3-220ENST00000613744 HOXC9P31274 260 aa27.64■■■□□ 2.01
POLR2J3-220ENST00000613744 CLUAP1Q96AJ1 413 aa27.64■■■□□ 2.01
POLR2J3-220ENST00000613744 FAM83GA6ND36 823 aa27.63■■■□□ 2.01
POLR2J3-220ENST00000613744 SEC24BO95487 1268 aa27.63■■■□□ 2.01
POLR2J3-220ENST00000613744 LTV1Q96GA3 475 aaPredicted RBP27.63■■■□□ 2.01
POLR2J3-220ENST00000613744 ZMYND15Q9H091 742 aa27.63■■■□□ 2.01
POLR2J3-220ENST00000613744 VSIG10Q8N0Z9 540 aa27.63■■■□□ 2.01
POLR2J3-220ENST00000613744 CFAP53Q96M91 514 aa27.63■■■□□ 2.01
POLR2J3-220ENST00000613744 TBC1D2Q9BYX2 928 aa27.61■■■□□ 2.01
POLR2J3-220ENST00000613744 FLT4P35916 1363 aa27.6■■■□□ 2.01
POLR2J3-220ENST00000613744 IP6K1Q92551 441 aa27.6■■■□□ 2.01
POLR2J3-220ENST00000613744 SPATA31A6Q5VVP1 1343 aa27.59■■■□□ 2.01
POLR2J3-220ENST00000613744 CPDO75976 1380 aa27.59■■■□□ 2.01
POLR2J3-220ENST00000613744 CHMP5Q9NZZ3 219 aa27.58■■■□□ 2.01
POLR2J3-220ENST00000613744 LRP6O75581 1613 aa27.58■■■□□ 2.01
POLR2J3-220ENST00000613744 RGPD5Q99666 1765 aa27.57■■■□□ 2
POLR2J3-220ENST00000613744 CDK12Q9NYV4 1490 aaPredicted RBP27.57■■■□□ 2
POLR2J3-220ENST00000613744 C8orf37Q96NL8 207 aa27.56■■■□□ 2
POLR2J3-220ENST00000613744 BCAR3O75815 825 aa27.55■■■□□ 2
POLR2J3-220ENST00000613744 EIF4A2Q14240 407 aaKnown RBP27.55■■■□□ 2
POLR2J3-220ENST00000613744 DIAPH1O60610 1272 aaKnown RBP27.54■■■□□ 2
POLR2J3-220ENST00000613744 TPM2P07951 284 aa27.54■■■□□ 2
POLR2J3-220ENST00000613744 MEX3CQ5U5Q3 659 aaKnown RBP27.54■■■□□ 2
POLR2J3-220ENST00000613744 DDX11L8A8MPP1 907 aa27.53■■■□□ 2
POLR2J3-220ENST00000613744 BTG4Q9NY30 223 aa27.53■■■□□ 2
POLR2J3-220ENST00000613744 COL18A1P39060 1754 aa27.53■■■□□ 2
POLR2J3-220ENST00000613744 RTL1A6NKG5 1358 aa27.53■■■□□ 2
POLR2J3-220ENST00000613744 COL3A1P02461 1466 aaPredicted RBP27.53■■■□□ 2
POLR2J3-220ENST00000613744 TRAK2O60296 914 aa27.53■■■□□ 2
POLR2J3-220ENST00000613744 U2SURPO15042 1029 aaKnown RBP27.52■■■□□ 2
POLR2J3-220ENST00000613744 ANKRD24Q8TF21 1146 aa27.52■■■□□ 2
POLR2J3-220ENST00000613744 MYH16Q9H6N6 1097 aa27.52■■■□□ 2
POLR2J3-220ENST00000613744 STRN4Q9NRL3 753 aa27.52■■■□□ 2
POLR2J3-220ENST00000613744 CAMTA1Q9Y6Y1 1673 aa27.52■■■□□ 2
POLR2J3-220ENST00000613744 ESPNB1AK53 854 aa27.52■■■□□ 2
POLR2J3-220ENST00000613744 IL13P35225 146 aa27.51■■□□□ 1.99
POLR2J3-220ENST00000613744 PANK2Q9BZ23 570 aa27.51■■□□□ 1.99
POLR2J3-220ENST00000613744 KIF24Q5T7B8 1368 aa27.51■■□□□ 1.99
POLR2J3-220ENST00000613744 NGLY1Q96IV0 654 aa27.5■■□□□ 1.99
POLR2J3-220ENST00000613744 ILDR1Q86SU0 546 aaPredicted RBP27.49■■□□□ 1.99
POLR2J3-220ENST00000613744 GRPEL1Q9HAV7 217 aa27.49■■□□□ 1.99
POLR2J3-220ENST00000613744 CSB-PGBD3P0DP91 1061 aa27.48■■□□□ 1.99
POLR2J3-220ENST00000613744 LMO7Q8WWI1 1683 aa27.48■■□□□ 1.99
POLR2J3-220ENST00000613744 U2AF1L5P0DN76 240 aaPredicted RBP27.47■■□□□ 1.99
POLR2J3-220ENST00000613744 EVA1CP58658 441 aa27.47■■□□□ 1.99
POLR2J3-220ENST00000613744 U2AF1Q01081 240 aaKnown RBP eCLIP27.47■■□□□ 1.99
POLR2J3-220ENST00000613744 CCDC146Q8IYE0 955 aa27.47■■□□□ 1.99
POLR2J3-220ENST00000613744 USHBP1Q8N6Y0 703 aa27.47■■□□□ 1.99
POLR2J3-220ENST00000613744 SPINK5Q9NQ38 1064 aaPredicted RBP27.47■■□□□ 1.99
POLR2J3-220ENST00000613744 COL14A1Q05707 1796 aaKnown RBP27.47■■□□□ 1.99
POLR2J3-220ENST00000613744 ERBB3P21860 1342 aa27.46■■□□□ 1.99
POLR2J3-220ENST00000613744 HMOX1P09601 288 aa27.45■■□□□ 1.98
POLR2J3-220ENST00000613744 EYA1Q99502 592 aa27.45■■□□□ 1.98
POLR2J3-220ENST00000613744 APAF1O14727 1248 aa27.44■■□□□ 1.98
POLR2J3-220ENST00000613744 PTMSP20962 102 aa27.44■■□□□ 1.98
POLR2J3-220ENST00000613744 NBPF6Q5VWK0 638 aa27.44■■□□□ 1.98
POLR2J3-220ENST00000613744 NBPF4Q96M43 638 aa27.44■■□□□ 1.98
POLR2J3-220ENST00000613744 COL5A2P05997 1499 aaPredicted RBP27.44■■□□□ 1.98
POLR2J3-220ENST00000613744 PLCH1Q4KWH8 1693 aa27.44■■□□□ 1.98
POLR2J3-220ENST00000613744 LARP1Q6PKG0 1096 aaKnown RBP27.44■■□□□ 1.98
POLR2J3-220ENST00000613744 NLRP2Q9NX02 1062 aa27.44■■□□□ 1.98
POLR2J3-220ENST00000613744 RGPD2P0DJD1 1756 aa27.43■■□□□ 1.98
POLR2J3-220ENST00000613744 CANXP27824 592 aaKnown RBP27.43■■□□□ 1.98
POLR2J3-220ENST00000613744 AEBP1Q8IUX7 1158 aa27.42■■□□□ 1.98
POLR2J3-220ENST00000613744 COG6Q9Y2V7 657 aa27.42■■□□□ 1.98
POLR2J3-220ENST00000613744 TOM1L2Q6ZVM7 507 aa27.41■■□□□ 1.98
POLR2J3-220ENST00000613744 PDCL3Q9H2J4 239 aa27.41■■□□□ 1.98
POLR2J3-220ENST00000613744 RWDD1Q9H446 243 aaPredicted RBP27.4■■□□□ 1.98
POLR2J3-220ENST00000613744 SULT6B1Q6IMI4 303 aa27.4■■□□□ 1.98
POLR2J3-220ENST00000613744 PDZRN3Q9UPQ7 1066 aa27.4■■□□□ 1.98
POLR2J3-220ENST00000613744 ABCC6O95255 1503 aa27.4■■□□□ 1.98
POLR2J3-220ENST00000613744 TRIM44Q96DX7 344 aaPredicted RBP27.39■■□□□ 1.98
POLR2J3-220ENST00000613744 GZF1Q9H116 711 aaPredicted RBP27.39■■□□□ 1.98
POLR2J3-220ENST00000613744 WDR17Q8IZU2 1322 aa27.39■■□□□ 1.97
POLR2J3-220ENST00000613744 SLIT2O94813 1529 aa27.39■■□□□ 1.97
POLR2J3-220ENST00000613744 AFF2P51816 1311 aa27.38■■□□□ 1.97
POLR2J3-220ENST00000613744 PANK1Q8TE04 598 aa27.38■■□□□ 1.97
POLR2J3-220ENST00000613744 USP21Q9UK80 565 aa27.37■■□□□ 1.97
POLR2J3-220ENST00000613744 SKOR2Q2VWA4 1001 aaPredicted RBP27.37■■□□□ 1.97
POLR2J3-220ENST00000613744 FNBP4Q8N3X1 1017 aaPredicted RBP27.36■■□□□ 1.97
POLR2J3-220ENST00000613744 CCDC9Q9Y3X0 531 aaKnown RBP27.36■■□□□ 1.97
POLR2J3-220ENST00000613744 C22orf23Q9BZE7 217 aa27.36■■□□□ 1.97
POLR2J3-220ENST00000613744 CIZ1Q9ULV3 898 aaPredicted RBP27.36■■□□□ 1.97
POLR2J3-220ENST00000613744 BCL9LQ86UU0 1499 aa27.35■■□□□ 1.97
POLR2J3-220ENST00000613744 IGSF1Q8N6C5 1336 aa27.35■■□□□ 1.97
POLR2J3-220ENST00000613744 UNC5CLQ8IV45 518 aa27.35■■□□□ 1.97
POLR2J3-220ENST00000613744 TERF1P54274 439 aa27.34■■□□□ 1.97
POLR2J3-220ENST00000613744 ARXQ96QS3 562 aa27.34■■□□□ 1.97
POLR2J3-220ENST00000613744 RGPD1P0DJD0 1748 aa27.34■■□□□ 1.97
POLR2J3-220ENST00000613744 NRAPQ86VF7 1730 aa27.33■■□□□ 1.97
POLR2J3-220ENST00000613744 DDIT3P35638 169 aa27.32■■□□□ 1.96
POLR2J3-220ENST00000613744 HSCBQ8IWL3 235 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms