RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 HLTFQ14527 1009 aaKnown RBP eCLIP9.77□□□□□ -0.858e-7■■□□□ 12.7
ALMS1-206ENST00000613296 CCDC69A6NI79 296 aa9.77□□□□□ -0.85
ALMS1-206ENST00000613296 PPP4R3AQ6IN85 833 aa9.77□□□□□ -0.85
ALMS1-206ENST00000613296 IRX3P78415 501 aaPredicted RBP9.77□□□□□ -0.85
ALMS1-206ENST00000613296 CFAP100Q494V2 611 aa9.77□□□□□ -0.85
ALMS1-206ENST00000613296 HYPKQ9NX55 129 aa9.77□□□□□ -0.85
ALMS1-206ENST00000613296 MCM2P49736 904 aa9.77□□□□□ -0.85
ALMS1-206ENST00000613296 MKRN1Q9UHC7 482 aaKnown RBP9.77□□□□□ -0.85
ALMS1-206ENST00000613296 KRT85P78386 507 aa9.77□□□□□ -0.85
ALMS1-206ENST00000613296 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.77□□□□□ -0.85
ALMS1-206ENST00000613296 IQCGQ9H095 443 aaKnown RBP9.77□□□□□ -0.85
ALMS1-206ENST00000613296 NSRP1Q9H0G5 558 aaKnown RBP9.77□□□□□ -0.85
ALMS1-206ENST00000613296 POTEB2H3BUK9 544 aa9.76□□□□□ -0.85
ALMS1-206ENST00000613296 ZNF76P36508 570 aa9.76□□□□□ -0.85
ALMS1-206ENST00000613296 SPATA32Q96LK8 384 aa9.76□□□□□ -0.85
ALMS1-206ENST00000613296 STK3Q13188 491 aa9.76□□□□□ -0.85
ALMS1-206ENST00000613296 FERMT1Q9BQL6 677 aa9.76□□□□□ -0.85
ALMS1-206ENST00000613296 FILIP1Q7Z7B0 1213 aa9.76□□□□□ -0.85
ALMS1-206ENST00000613296 CWC25Q9NXE8 425 aaPredicted RBP9.76□□□□□ -0.85
ALMS1-206ENST00000613296 SEPT10Q9P0V9 454 aa9.76□□□□□ -0.85
ALMS1-206ENST00000613296 KIF18AQ8NI77 898 aa9.76□□□□□ -0.85
ALMS1-206ENST00000613296 SMC6Q96SB8 1091 aa9.76□□□□□ -0.85
ALMS1-206ENST00000613296 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.76□□□□□ -0.85
ALMS1-206ENST00000613296 CYP46A1Q9Y6A2 500 aa9.76□□□□□ -0.85
ALMS1-206ENST00000613296 A0A1W2PRG0 241 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 NACAP1Q9BZK3 213 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 GRPEL1Q9HAV7 217 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 LMAN1P49257 510 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 IL27Q8NEV9 243 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 DRC1Q96MC2 740 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 NUP133Q8WUM0 1156 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 UACAQ9BZF9 1416 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 TTC36A6NLP5 189 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 USO1O60763 962 aaKnown RBP9.75□□□□□ -0.85
ALMS1-206ENST00000613296 ANKRD1Q15327 319 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 SMTNL1A8MU46 457 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 WDR33Q9C0J8 1336 aaKnown RBP9.75□□□□□ -0.85
ALMS1-206ENST00000613296 MAP7D1Q3KQU3 841 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 RGS22Q8NE09 1264 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 ATP2C2O75185 946 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 SRRTQ9BXP5 876 aaKnown RBP9.75□□□□□ -0.85
ALMS1-206ENST00000613296 KIF5AQ12840 1032 aa9.75□□□□□ -0.85
ALMS1-206ENST00000613296 ZFYP08048 801 aaPredicted RBP9.74□□□□□ -0.85
ALMS1-206ENST00000613296 CCDC158Q5M9N0 1113 aa9.74□□□□□ -0.85
ALMS1-206ENST00000613296 FKBP15Q5T1M5 1219 aa9.74□□□□□ -0.85
ALMS1-206ENST00000613296 PAXIP1Q6ZW49 1069 aaPredicted RBP9.74□□□□□ -0.85
ALMS1-206ENST00000613296 CCDC96Q2M329 555 aa9.74□□□□□ -0.85
ALMS1-206ENST00000613296 TTC39AQ5SRH9 613 aa9.74□□□□□ -0.85
ALMS1-206ENST00000613296 CEP120Q8N960 986 aa9.74□□□□□ -0.85
ALMS1-206ENST00000613296 NUP62CLQ9H1M0 184 aa9.74□□□□□ -0.85
ALMS1-206ENST00000613296 PTPN14Q15678 1187 aa9.74□□□□□ -0.85
ALMS1-206ENST00000613296 NUP88Q99567 741 aaPredicted RBP9.74□□□□□ -0.85
ALMS1-206ENST00000613296 SUDS3Q9H7L9 328 aaPredicted RBP9.74□□□□□ -0.85
ALMS1-206ENST00000613296 DZIP1Q86YF9 867 aaKnown RBP9.74□□□□□ -0.85
ALMS1-206ENST00000613296 SLU7O95391 586 aaKnown RBP9.74□□□□□ -0.85
ALMS1-206ENST00000613296 AIMP1Q12904 312 aaKnown RBP9.74□□□□□ -0.85
ALMS1-206ENST00000613296 RIC3Q7Z5B4 369 aa9.74□□□□□ -0.85
ALMS1-206ENST00000613296 TMEM87AQ8NBN3 555 aa9.74□□□□□ -0.85
ALMS1-206ENST00000613296 DYNC1I1O14576 645 aa9.73□□□□□ -0.85
ALMS1-206ENST00000613296 CEP57Q86XR8 500 aa9.73□□□□□ -0.85
ALMS1-206ENST00000613296 ESPNB1AK53 854 aa9.73□□□□□ -0.85
ALMS1-206ENST00000613296 TCHPQ9BT92 498 aa9.73□□□□□ -0.85
ALMS1-206ENST00000613296 RFC1P35251 1148 aaPredicted RBP9.73□□□□□ -0.85
ALMS1-206ENST00000613296 DDX12PQ92771 950 aa9.73□□□□□ -0.85
ALMS1-206ENST00000613296 NAA15Q9BXJ9 866 aaKnown RBP9.73□□□□□ -0.85
ALMS1-206ENST00000613296 UBA5Q9GZZ9 404 aa9.73□□□□□ -0.85
ALMS1-206ENST00000613296 SMC1BQ8NDV3 1235 aa9.73□□□□□ -0.85
ALMS1-206ENST00000613296 TSG101Q99816 390 aa9.73□□□□□ -0.85
ALMS1-206ENST00000613296 ANKRD30AQ9BXX3 1397 aa9.73□□□□□ -0.85
ALMS1-206ENST00000613296 FAM114A2Q9NRY5 505 aa9.72□□□□□ -0.85
ALMS1-206ENST00000613296 CACNA2D4Q7Z3S7 1137 aa9.72□□□□□ -0.85
ALMS1-206ENST00000613296 KIF4AO95239 1232 aa9.72□□□□□ -0.85
ALMS1-206ENST00000613296 RBM5P52756 815 aaKnown RBP eCLIP9.72□□□□□ -0.85
ALMS1-206ENST00000613296 TNIP1Q15025 636 aa9.72□□□□□ -0.85
ALMS1-206ENST00000613296 OTUD6BQ8N6M0 293 aa9.72□□□□□ -0.85
ALMS1-206ENST00000613296 ACTN2P35609 894 aa9.72□□□□□ -0.85
ALMS1-206ENST00000613296 ARID4AP29374 1257 aaPredicted RBP9.72□□□□□ -0.85
ALMS1-206ENST00000613296 TDO2P48775 406 aa9.72□□□□□ -0.85
ALMS1-206ENST00000613296 AAMPQ13685 434 aa9.72□□□□□ -0.85
ALMS1-206ENST00000613296 LIG1P18858 919 aa9.72□□□□□ -0.85
ALMS1-206ENST00000613296 PRPF4BQ13523 1007 aaKnown RBP9.72□□□□□ -0.85
ALMS1-206ENST00000613296 FERMT2Q96AC1 680 aa9.72□□□□□ -0.85
ALMS1-206ENST00000613296 ODF2LQ9ULJ1 636 aa9.72□□□□□ -0.85
ALMS1-206ENST00000613296 PAIP2Q9BPZ3 127 aaKnown RBP9.72□□□□□ -0.85
ALMS1-206ENST00000613296 SH3BP5O60239 455 aa9.71□□□□□ -0.85
ALMS1-206ENST00000613296 KIF6Q6ZMV9 814 aa9.71□□□□□ -0.85
ALMS1-206ENST00000613296 MYO15BQ96JP2 1530 aa9.71□□□□□ -0.85
ALMS1-206ENST00000613296 RIPK4P57078 832 aa9.71□□□□□ -0.85
ALMS1-206ENST00000613296 RSRC1Q96IZ7 334 aaKnown RBP9.71□□□□□ -0.85
ALMS1-206ENST00000613296 TSPYL4Q9UJ04 414 aa9.71□□□□□ -0.85
ALMS1-206ENST00000613296 EVC2Q86UK5 1308 aa9.71□□□□□ -0.85
ALMS1-206ENST00000613296 SEC63Q9UGP8 760 aaKnown RBP9.71□□□□□ -0.85
ALMS1-206ENST00000613296 STMN1P16949 149 aa9.71□□□□□ -0.85
ALMS1-206ENST00000613296 MAP3K9P80192 1104 aa9.71□□□□□ -0.85
ALMS1-206ENST00000613296 CCDC174Q6PII3 467 aa9.71□□□□□ -0.85
ALMS1-206ENST00000613296 LARP1BQ659C4 914 aaKnown RBP9.71□□□□□ -0.85
ALMS1-206ENST00000613296 PIBF1Q8WXW3 757 aa9.71□□□□□ -0.85
ALMS1-206ENST00000613296 KIF4BQ2VIQ3 1234 aa9.71□□□□□ -0.86
ALMS1-206ENST00000613296 CEP135Q66GS9 1140 aa9.71□□□□□ -0.86
ALMS1-206ENST00000613296 PPP1R9BQ96SB3 815 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms