RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 SLC27A3Q5K4L6 730 aa20.49■□□□□ 0.87
FDPS-221ENST00000612683 SMG6Q86US8 1419 aaKnown RBP20.48■□□□□ 0.87
FDPS-221ENST00000612683 TATP17735 454 aaPredicted RBP20.48■□□□□ 0.87
FDPS-221ENST00000612683 YY1P25490 414 aa20.48■□□□□ 0.87
FDPS-221ENST00000612683 ZNF827Q17R98 1081 aa20.48■□□□□ 0.87
FDPS-221ENST00000612683 POLR3GLQ9BT43 218 aa20.48■□□□□ 0.87
FDPS-221ENST00000612683 CLSPNQ9HAW4 1339 aa20.48■□□□□ 0.87
FDPS-221ENST00000612683 KCNQ4P56696 695 aa20.47■□□□□ 0.87
FDPS-221ENST00000612683 CGNL1Q0VF96 1302 aa20.47■□□□□ 0.87
FDPS-221ENST00000612683 MEGF6O75095 1541 aa20.47■□□□□ 0.87
FDPS-221ENST00000612683 INSRP06213 1382 aa20.46■□□□□ 0.87
FDPS-221ENST00000612683 PPM1GO15355 546 aaPredicted RBP20.46■□□□□ 0.87
FDPS-221ENST00000612683 NSD3Q9BZ95 1437 aa20.45■□□□□ 0.86
FDPS-221ENST00000612683 AKT1S1Q96B36 256 aa20.45■□□□□ 0.86
FDPS-221ENST00000612683 FHDC1Q9C0D6 1143 aaPredicted RBP20.45■□□□□ 0.86
FDPS-221ENST00000612683 FLT4P35916 1363 aa20.45■□□□□ 0.86
FDPS-221ENST00000612683 SYT17Q9BSW7 474 aa20.44■□□□□ 0.86
FDPS-221ENST00000612683 EMILIN1Q9Y6C2 1016 aa20.44■□□□□ 0.86
FDPS-221ENST00000612683 KIF20BQ96Q89 1820 aa20.43■□□□□ 0.86
FDPS-221ENST00000612683 ARXQ96QS3 562 aa20.43■□□□□ 0.86
FDPS-221ENST00000612683 SGIP1Q9BQI5 828 aa20.43■□□□□ 0.86
FDPS-221ENST00000612683 TFCP2L1Q9NZI6 479 aa20.43■□□□□ 0.86
FDPS-221ENST00000612683 KIF24Q5T7B8 1368 aa20.43■□□□□ 0.86
FDPS-221ENST00000612683 MYOM1P52179 1685 aa20.42■□□□□ 0.86
FDPS-221ENST00000612683 SLC16A10Q8TF71 515 aa20.41■□□□□ 0.86
FDPS-221ENST00000612683 CCNL1Q9UK58 526 aaPredicted RBP20.41■□□□□ 0.86
FDPS-221ENST00000612683 PAPPAQ13219 1627 aa20.41■□□□□ 0.86
FDPS-221ENST00000612683 NSD2O96028 1365 aa20.4■□□□□ 0.86
FDPS-221ENST00000612683 DOT1LQ8TEK3 1739 aa20.4■□□□□ 0.86
FDPS-221ENST00000612683 SHANK3Q9BYB0 1731 aa20.39■□□□□ 0.86
FDPS-221ENST00000612683 PCDH11XQ9BZA7 1347 aa20.39■□□□□ 0.85
FDPS-221ENST00000612683 PCDH11YQ9BZA8 1340 aa20.39■□□□□ 0.85
FDPS-221ENST00000612683 PNPLA7Q6ZV29 1317 aa20.38■□□□□ 0.85
FDPS-221ENST00000612683 EIF4G2P78344 907 aaKnown RBP eCLIP20.38■□□□□ 0.85
FDPS-221ENST00000612683 MPRIPQ6WCQ1 1025 aa20.37■□□□□ 0.85
FDPS-221ENST00000612683 CCER1Q8TC90 406 aaPredicted RBP20.37■□□□□ 0.85
FDPS-221ENST00000612683 WASHC2AQ641Q2 1341 aa20.36■□□□□ 0.85
FDPS-221ENST00000612683 CYP27B1O15528 508 aa20.36■□□□□ 0.85
FDPS-221ENST00000612683 MSH5O43196 834 aa20.36■□□□□ 0.85
FDPS-221ENST00000612683 POLD1P28340 1107 aa20.36■□□□□ 0.85
FDPS-221ENST00000612683 HSPA5P11021 654 aaKnown RBP20.35■□□□□ 0.85
FDPS-221ENST00000612683 TNNT2P45379 298 aaPredicted RBP20.35■□□□□ 0.85
FDPS-221ENST00000612683 KLHL34Q8N239 644 aa20.35■□□□□ 0.85
FDPS-221ENST00000612683 POLKQ9UBT6 870 aa20.35■□□□□ 0.85
FDPS-221ENST00000612683 EYA1Q99502 592 aa20.34■□□□□ 0.85
FDPS-221ENST00000612683 SPG7Q9UQ90 795 aa20.34■□□□□ 0.85
FDPS-221ENST00000612683 MAP2P11137 1827 aaKnown RBP20.34■□□□□ 0.85
FDPS-221ENST00000612683 LY75O60449 1722 aa20.33■□□□□ 0.85
FDPS-221ENST00000612683 PANK3Q9H999 370 aa20.32■□□□□ 0.84
FDPS-221ENST00000612683 HMGB2P26583 209 aaKnown RBP20.31■□□□□ 0.84
FDPS-221ENST00000612683 COL23A1Q86Y22 540 aaPredicted RBP20.31■□□□□ 0.84
FDPS-221ENST00000612683 SMARCC1Q92922 1105 aaPredicted RBP20.3■□□□□ 0.84
FDPS-221ENST00000612683 QSER1Q2KHR3 1735 aa20.3■□□□□ 0.84
FDPS-221ENST00000612683 NKX1-1Q15270 411 aaPredicted RBP20.29■□□□□ 0.84
FDPS-221ENST00000612683 GPR162Q16538 588 aa20.29■□□□□ 0.84
FDPS-221ENST00000612683 PIGBQ92521 554 aa20.29■□□□□ 0.84
FDPS-221ENST00000612683 PALLDQ8WX93 1383 aa20.29■□□□□ 0.84
FDPS-221ENST00000612683 EIF4A2Q14240 407 aaKnown RBP20.28■□□□□ 0.84
FDPS-221ENST00000612683 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.28■□□□□ 0.846e-9■□□□□ 10.6
FDPS-221ENST00000612683 MAP3K5Q99683 1374 aa20.28■□□□□ 0.84
FDPS-221ENST00000612683 TUBGCP6Q96RT7 1819 aa20.27■□□□□ 0.84
FDPS-221ENST00000612683 IFNL2Q8IZJ0 200 aa20.26■□□□□ 0.83
FDPS-221ENST00000612683 NCAPD2Q15021 1401 aa20.26■□□□□ 0.83
FDPS-221ENST00000612683 MSL1Q68DK7 614 aa20.25■□□□□ 0.83
FDPS-221ENST00000612683 PELP1Q8IZL8 1130 aaKnown RBP20.25■□□□□ 0.83
FDPS-221ENST00000612683 FLAD1Q8NFF5 587 aa20.25■□□□□ 0.83
FDPS-221ENST00000612683 TMOD3Q9NYL9 352 aa20.24■□□□□ 0.83
FDPS-221ENST00000612683 ITGB4P16144 1822 aa20.24■□□□□ 0.83
FDPS-221ENST00000612683 PHKG2P15735 406 aa20.23■□□□□ 0.83
FDPS-221ENST00000612683 PKD1L3Q7Z443 1732 aa20.23■□□□□ 0.83
FDPS-221ENST00000612683 MORC1Q86VD1 984 aa20.23■□□□□ 0.83
FDPS-221ENST00000612683 AK7Q96M32 723 aa20.23■□□□□ 0.83
FDPS-221ENST00000612683 ANKRD26Q9UPS8 1709 aa20.23■□□□□ 0.83
FDPS-221ENST00000612683 NLGN2Q8NFZ4 835 aa20.22■□□□□ 0.83
FDPS-221ENST00000612683 LOC102724428A0A0B4J2F2 783 aa20.21■□□□□ 0.83
FDPS-221ENST00000612683 SIK1P57059 783 aa20.21■□□□□ 0.83
FDPS-221ENST00000612683 ZNF784Q8NCA9 323 aaPredicted RBP20.21■□□□□ 0.83
FDPS-221ENST00000612683 ASAP1Q9ULH1 1129 aa20.21■□□□□ 0.83
FDPS-221ENST00000612683 COL24A1Q17RW2 1714 aa20.21■□□□□ 0.83
FDPS-221ENST00000612683 TOGARAM1Q9Y4F4 1720 aa20.21■□□□□ 0.83
FDPS-221ENST00000612683 C5P01031 1676 aa20.2■□□□□ 0.82
FDPS-221ENST00000612683 KNSTRNQ9Y448 316 aa20.2■□□□□ 0.82
FDPS-221ENST00000612683 CHD4Q14839 1912 aa20.19■□□□□ 0.82
FDPS-221ENST00000612683 TAF1LQ8IZX4 1826 aa20.19■□□□□ 0.82
FDPS-221ENST00000612683 PHF14O94880 888 aa20.19■□□□□ 0.82
FDPS-221ENST00000612683 PLEKHO1Q53GL0 409 aaPredicted RBP20.19■□□□□ 0.82
FDPS-221ENST00000612683 SMIM5Q71RC9 77 aa20.19■□□□□ 0.82
FDPS-221ENST00000612683 ATP6V1AP38606 617 aa20.18■□□□□ 0.82
FDPS-221ENST00000612683 IGSF1Q8N6C5 1336 aa20.18■□□□□ 0.82
FDPS-221ENST00000612683 LINC00116Q8NCU8 138 aa20.17■□□□□ 0.82
FDPS-221ENST00000612683 ATG3Q9NT62 314 aa20.17■□□□□ 0.82
FDPS-221ENST00000612683 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.16■□□□□ 0.82
FDPS-221ENST00000612683 HSP90AB1P08238 724 aaKnown RBP20.16■□□□□ 0.82
FDPS-221ENST00000612683 AMIGO3Q86WK7 504 aa20.16■□□□□ 0.82
FDPS-221ENST00000612683 ERVV-2B6SEH9 535 aa20.15■□□□□ 0.82
FDPS-221ENST00000612683 ITPK1Q13572 414 aa20.15■□□□□ 0.82
FDPS-221ENST00000612683 C4BP0C0L5 1744 aa20.15■□□□□ 0.82
FDPS-221ENST00000612683 SSFA2P28290 1259 aa20.14■□□□□ 0.81
FDPS-221ENST00000612683 AMOTQ4VCS5 1084 aa20.14■□□□□ 0.81
FDPS-221ENST00000612683 ZNF530Q6P9A1 599 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms