RNA–Protein interactions for RNA: ENST00000612482.4

SREBF2-209, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 5 BASIC

Gene SREBF2, Length 5,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-209ENST00000612482 CDKL5O76039 1030 aa22.58■■□□□ 1.21
SREBF2-209ENST00000612482 ANKRD30BQ9BXX2 1392 aa22.58■■□□□ 1.21
SREBF2-209ENST00000612482 PDCL2Q8N4E4 241 aa22.58■■□□□ 1.2
SREBF2-209ENST00000612482 THUMPD2Q9BTF0 503 aaKnown RBP22.58■■□□□ 1.2
SREBF2-209ENST00000612482 SMARCA5O60264 1052 aaPredicted RBP22.57■■□□□ 1.2
SREBF2-209ENST00000612482 NOL7Q9UMY1 257 aaKnown RBP22.57■■□□□ 1.2
SREBF2-209ENST00000612482 STRN4Q9NRL3 753 aa22.57■■□□□ 1.2
SREBF2-209ENST00000612482 ATP2B2Q01814 1243 aa22.57■■□□□ 1.2
SREBF2-209ENST00000612482 ZSCAN25Q6NSZ9 544 aa22.57■■□□□ 1.2
SREBF2-209ENST00000612482 CCDC83Q8IWF9 413 aa22.57■■□□□ 1.2
SREBF2-209ENST00000612482 KIAA0754O94854 1291 aa22.57■■□□□ 1.2
SREBF2-209ENST00000612482 NSD3Q9BZ95 1437 aa22.57■■□□□ 1.2
SREBF2-209ENST00000612482 FAM193AP78312 1265 aa22.56■■□□□ 1.2
SREBF2-209ENST00000612482 RTEL1-TNFRSF6BF6WH68 1400 aa22.56■■□□□ 1.2
SREBF2-209ENST00000612482 CTNNA3Q9UI47 895 aa22.56■■□□□ 1.2
SREBF2-209ENST00000612482 RARSP54136 660 aaKnown RBP22.56■■□□□ 1.2
SREBF2-209ENST00000612482 SMTNL1A8MU46 457 aa22.56■■□□□ 1.2
SREBF2-209ENST00000612482 CENPHQ9H3R5 247 aa22.56■■□□□ 1.2
SREBF2-209ENST00000612482 PRG4Q92954 1404 aaPredicted RBP22.55■■□□□ 1.2
SREBF2-209ENST00000612482 MX1P20591 662 aa22.55■■□□□ 1.2
SREBF2-209ENST00000612482 SSH1Q8WYL5 1049 aa22.55■■□□□ 1.2
SREBF2-209ENST00000612482 MIS18AQ9NYP9 233 aa22.54■■□□□ 1.2
SREBF2-209ENST00000612482 BTBD11A6QL63 1104 aa22.54■■□□□ 1.2
SREBF2-209ENST00000612482 CFAP100Q494V2 611 aa22.54■■□□□ 1.2
SREBF2-209ENST00000612482 CEP126Q9P2H0 1117 aa22.54■■□□□ 1.2
SREBF2-209ENST00000612482 ERICH4A6NGS2 130 aa22.54■■□□□ 1.2
SREBF2-209ENST00000612482 NEFHP12036 1026 aa22.54■■□□□ 1.2
SREBF2-209ENST00000612482 UBXN4Q92575 508 aa22.54■■□□□ 1.2
SREBF2-209ENST00000612482 DAPK1P53355 1430 aa22.53■■□□□ 1.2
SREBF2-209ENST00000612482 TMEM132AQ24JP5 1023 aa22.53■■□□□ 1.2
SREBF2-209ENST00000612482 DDX54Q8TDD1 881 aaKnown RBP22.53■■□□□ 1.2
SREBF2-209ENST00000612482 C11orf95C9JLR9 678 aaPredicted RBP22.53■■□□□ 1.2
SREBF2-209ENST00000612482 PRKCSHP14314 528 aaPredicted RBP22.53■■□□□ 1.2
SREBF2-209ENST00000612482 SOGA3Q5TF21 947 aa22.53■■□□□ 1.2
SREBF2-209ENST00000612482 PRPF40BQ6NWY9 871 aaKnown RBP22.53■■□□□ 1.2
SREBF2-209ENST00000612482 CCDC102AQ96A19 550 aa22.53■■□□□ 1.2
SREBF2-209ENST00000612482 MPHOSPH8Q99549 860 aa22.53■■□□□ 1.2
SREBF2-209ENST00000612482 TBC1D2Q9BYX2 928 aa22.53■■□□□ 1.2
SREBF2-209ENST00000612482 PDIA4P13667 645 aaKnown RBP22.52■■□□□ 1.2
SREBF2-209ENST00000612482 HSP90AB3PQ58FF7 597 aa22.52■■□□□ 1.2
SREBF2-209ENST00000612482 SSFA2P28290 1259 aa22.52■■□□□ 1.2
SREBF2-209ENST00000612482 TDO2P48775 406 aa22.52■■□□□ 1.2
SREBF2-209ENST00000612482 TXLNBQ8N3L3 684 aa22.52■■□□□ 1.2
SREBF2-209ENST00000612482 PLCD4Q9BRC7 762 aa22.52■■□□□ 1.2
SREBF2-209ENST00000612482 UBAC1Q9BSL1 405 aa22.52■■□□□ 1.2
SREBF2-209ENST00000612482 LRRFIP2Q9Y608 721 aaKnown RBP22.52■■□□□ 1.2
SREBF2-209ENST00000612482 PDCL3Q9H2J4 239 aa22.52■■□□□ 1.2
SREBF2-209ENST00000612482 ATAD2Q6PL18 1390 aa22.51■■□□□ 1.19
SREBF2-209ENST00000612482 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
SREBF2-209ENST00000612482 EPB41L2O43491 1005 aaKnown RBP22.51■■□□□ 1.19
SREBF2-209ENST00000612482 PROSER2Q86WR7 435 aaPredicted RBP22.51■■□□□ 1.19
SREBF2-209ENST00000612482 SPG7Q9UQ90 795 aa22.51■■□□□ 1.19
SREBF2-209ENST00000612482 ARHGAP29Q52LW3 1261 aa22.5■■□□□ 1.19
SREBF2-209ENST00000612482 KLHL34Q8N239 644 aa22.5■■□□□ 1.19
SREBF2-209ENST00000612482 TIAM1Q13009 1591 aa22.5■■□□□ 1.19
SREBF2-209ENST00000612482 CCDC183Q5T5S1 534 aa22.5■■□□□ 1.19
SREBF2-209ENST00000612482 MCM10Q7L590 875 aa22.5■■□□□ 1.19
SREBF2-209ENST00000612482 TNPO1Q92973 898 aaKnown RBP22.5■■□□□ 1.19
SREBF2-209ENST00000612482 KIF1BPQ96EK5 621 aa22.5■■□□□ 1.19
SREBF2-209ENST00000612482 GRIN2BQ13224 1484 aa22.5■■□□□ 1.19
SREBF2-209ENST00000612482 DUSP27Q5VZP5 1158 aa22.5■■□□□ 1.19
SREBF2-209ENST00000612482 SSBP05455 408 aaKnown RBP eCLIP22.49■■□□□ 1.19
SREBF2-209ENST00000612482 XPCQ01831 940 aaPredicted RBP22.49■■□□□ 1.19
SREBF2-209ENST00000612482 PTPN14Q15678 1187 aa22.49■■□□□ 1.19
SREBF2-209ENST00000612482 EFCAB5A4FU69 1503 aa22.49■■□□□ 1.19
SREBF2-209ENST00000612482 SPINK5Q9NQ38 1064 aaPredicted RBP22.49■■□□□ 1.19
SREBF2-209ENST00000612482 SLC52A1Q9NWF4 448 aa22.49■■□□□ 1.19
SREBF2-209ENST00000612482 SFPQP23246 707 aaKnown RBP eCLIP22.49■■□□□ 1.19
SREBF2-209ENST00000612482 IQCEQ6IPM2 695 aa22.48■■□□□ 1.19
SREBF2-209ENST00000612482 GLRX3O76003 335 aaKnown RBP22.48■■□□□ 1.19
SREBF2-209ENST00000612482 IMMTQ16891 758 aaKnown RBP22.48■■□□□ 1.19
SREBF2-209ENST00000612482 TAX1BP1Q86VP1 789 aa22.48■■□□□ 1.19
SREBF2-209ENST00000612482 PIBF1Q8WXW3 757 aa22.48■■□□□ 1.19
SREBF2-209ENST00000612482 CCDC85AQ96PX6 553 aaPredicted RBP22.48■■□□□ 1.19
SREBF2-209ENST00000612482 TROQ12816 1431 aaPredicted RBP22.48■■□□□ 1.19
SREBF2-209ENST00000612482 EIF5P55010 431 aaKnown RBP22.48■■□□□ 1.19
SREBF2-209ENST00000612482 TOM1L2Q6ZVM7 507 aa22.48■■□□□ 1.19
SREBF2-209ENST00000612482 NKTRP30414 1462 aaKnown RBP22.48■■□□□ 1.19
SREBF2-209ENST00000612482 IDH1O75874 414 aaKnown RBP22.47■■□□□ 1.19
SREBF2-209ENST00000612482 TMCO3Q6UWJ1 677 aa22.47■■□□□ 1.19
SREBF2-209ENST00000612482 KIAA1328Q86T90 577 aa22.47■■□□□ 1.19
SREBF2-209ENST00000612482 WASF1Q92558 559 aa22.46■■□□□ 1.19
SREBF2-209ENST00000612482 GNAT3A8MTJ3 354 aa22.46■■□□□ 1.19
SREBF2-209ENST00000612482 ALDH1L2Q3SY69 923 aa22.46■■□□□ 1.19
SREBF2-209ENST00000612482 SCAND2PQ9GZW5 306 aaPredicted RBP22.46■■□□□ 1.19
SREBF2-209ENST00000612482 NAIPQ13075 1403 aa22.45■■□□□ 1.18
SREBF2-209ENST00000612482 CBX1P83916 185 aa22.45■■□□□ 1.18
SREBF2-209ENST00000612482 SEPT7Q16181 437 aaKnown RBP22.45■■□□□ 1.18
SREBF2-209ENST00000612482 ENOX2Q16206 610 aaKnown RBP22.45■■□□□ 1.18
SREBF2-209ENST00000612482 SEPT11Q9NVA2 429 aaKnown RBP22.45■■□□□ 1.18
SREBF2-209ENST00000612482 PLEKHH2Q8IVE3 1493 aa22.45■■□□□ 1.18
SREBF2-209ENST00000612482 PRXQ9BXM0 1461 aa22.45■■□□□ 1.18
SREBF2-209ENST00000612482 RAB11FIP3O75154 756 aa22.45■■□□□ 1.18
SREBF2-209ENST00000612482 DHX37Q8IY37 1157 aaKnown RBP22.45■■□□□ 1.18
SREBF2-209ENST00000612482 BMP2KQ9NSY1 1161 aaPredicted RBP22.45■■□□□ 1.18
SREBF2-209ENST00000612482 RAI14Q9P0K7 980 aa22.45■■□□□ 1.18
SREBF2-209ENST00000612482 BOLA2Q9H3K6 86 aa22.44■■□□□ 1.18
SREBF2-209ENST00000612482 ANO10Q9NW15 660 aa22.44■■□□□ 1.18
SREBF2-209ENST00000612482 USP25Q9UHP3 1055 aa22.44■■□□□ 1.18
SREBF2-209ENST00000612482 KIF2AO00139 706 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms