RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 F6X3S4 739 aa17.69■□□□□ 0.42
PCDHGA3-202ENST00000612467 THEMISQ8N1K5 641 aaPredicted RBP17.68■□□□□ 0.42
PCDHGA3-202ENST00000612467 API5Q9BZZ5 524 aaKnown RBP17.68■□□□□ 0.42
PCDHGA3-202ENST00000612467 ZBTB7CA1YPR0 619 aa17.67■□□□□ 0.42
PCDHGA3-202ENST00000612467 SLC4A2P04920 1241 aa17.67■□□□□ 0.42
PCDHGA3-202ENST00000612467 OTUD7AQ8TE49 926 aaPredicted RBP17.67■□□□□ 0.42
PCDHGA3-202ENST00000612467 ANTXR1Q9H6X2 564 aa17.67■□□□□ 0.42
PCDHGA3-202ENST00000612467 NALCNQ8IZF0 1738 aa17.67■□□□□ 0.42
PCDHGA3-202ENST00000612467 FER1L4A9Z1Z3 1794 aa17.67■□□□□ 0.42
PCDHGA3-202ENST00000612467 GSE1Q14687 1217 aa17.67■□□□□ 0.42
PCDHGA3-202ENST00000612467 MEIS3Q99687 375 aa17.67■□□□□ 0.42
PCDHGA3-202ENST00000612467 RGS12O14924 1447 aa17.67■□□□□ 0.42
PCDHGA3-202ENST00000612467 ARHGAP23Q9P227 1491 aa17.67■□□□□ 0.42
PCDHGA3-202ENST00000612467 IL27Q8NEV9 243 aa17.66■□□□□ 0.42
PCDHGA3-202ENST00000612467 MSH6P52701 1360 aa17.66■□□□□ 0.42
PCDHGA3-202ENST00000612467 CRB1P82279 1406 aa17.66■□□□□ 0.42
PCDHGA3-202ENST00000612467 SLC4A10Q6U841 1118 aa17.66■□□□□ 0.42
PCDHGA3-202ENST00000612467 TSPYL4Q9UJ04 414 aa17.66■□□□□ 0.42
PCDHGA3-202ENST00000612467 RGPD1P0DJD0 1748 aa17.65■□□□□ 0.42
PCDHGA3-202ENST00000612467 SLIT1O75093 1534 aa17.65■□□□□ 0.42
PCDHGA3-202ENST00000612467 SMARCA5O60264 1052 aaPredicted RBP17.65■□□□□ 0.42
PCDHGA3-202ENST00000612467 PIK3C2AO00443 1686 aa17.65■□□□□ 0.42
PCDHGA3-202ENST00000612467 ABTB2Q8N961 1025 aa17.65■□□□□ 0.42
PCDHGA3-202ENST00000612467 SETD1BQ9UPS6 1966 aaKnown RBP17.64■□□□□ 0.41
PCDHGA3-202ENST00000612467 FLT4P35916 1363 aa17.64■□□□□ 0.41
PCDHGA3-202ENST00000612467 RTF1Q92541 710 aaKnown RBP17.64■□□□□ 0.41
PCDHGA3-202ENST00000612467 GCC1Q96CN9 775 aa17.63■□□□□ 0.41
PCDHGA3-202ENST00000612467 SBNO1A3KN83 1393 aa17.63■□□□□ 0.41
PCDHGA3-202ENST00000612467 TTC21AQ8NDW8 1320 aa17.63■□□□□ 0.41
PCDHGA3-202ENST00000612467 RTN4Q9NQC3 1192 aaKnown RBP17.63■□□□□ 0.41
PCDHGA3-202ENST00000612467 GSPT1P15170 499 aaKnown RBP17.62■□□□□ 0.41
PCDHGA3-202ENST00000612467 TBC1D9Q6ZT07 1266 aa17.62■□□□□ 0.41
PCDHGA3-202ENST00000612467 RBM42Q9BTD8 480 aaKnown RBP17.62■□□□□ 0.41
PCDHGA3-202ENST00000612467 FMN2Q9NZ56 1722 aa17.62■□□□□ 0.41
PCDHGA3-202ENST00000612467 HOXC9P31274 260 aa17.62■□□□□ 0.41
PCDHGA3-202ENST00000612467 INTS3Q68E01 1043 aaKnown RBP17.62■□□□□ 0.41
PCDHGA3-202ENST00000612467 XPCQ01831 940 aaPredicted RBP17.61■□□□□ 0.41
PCDHGA3-202ENST00000612467 BMP2KLQ5H9B9 411 aa17.61■□□□□ 0.41
PCDHGA3-202ENST00000612467 ARHGEF10O15013 1369 aa17.61■□□□□ 0.41
PCDHGA3-202ENST00000612467 FOXD4L1Q9NU39 408 aa17.61■□□□□ 0.41
PCDHGA3-202ENST00000612467 BRPF3Q9ULD4 1205 aa17.61■□□□□ 0.41
PCDHGA3-202ENST00000612467 IGSF1Q8N6C5 1336 aa17.6■□□□□ 0.41
PCDHGA3-202ENST00000612467 CD2BP2O95400 341 aaKnown RBP17.6■□□□□ 0.41
PCDHGA3-202ENST00000612467 ATP10DQ9P241 1426 aa17.6■□□□□ 0.41
PCDHGA3-202ENST00000612467 CEP85Q6P2H3 762 aa17.6■□□□□ 0.41
PCDHGA3-202ENST00000612467 PLEKHM2Q8IWE5 1019 aa17.59■□□□□ 0.41
PCDHGA3-202ENST00000612467 ARXQ96QS3 562 aa17.58■□□□□ 0.4
PCDHGA3-202ENST00000612467 DCTPP1Q9H773 170 aa17.58■□□□□ 0.4
PCDHGA3-202ENST00000612467 RTL1A6NKG5 1358 aa17.58■□□□□ 0.4
PCDHGA3-202ENST00000612467 IL17REQ8NFR9 667 aa17.57■□□□□ 0.4
PCDHGA3-202ENST00000612467 KIF2CQ99661 725 aa17.57■□□□□ 0.4
PCDHGA3-202ENST00000612467 KDRP35968 1356 aa17.57■□□□□ 0.4
PCDHGA3-202ENST00000612467 KIAA0232Q92628 1395 aa17.57■□□□□ 0.4
PCDHGA3-202ENST00000612467 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
PCDHGA3-202ENST00000612467 XRN1Q8IZH2 1706 aaKnown RBP17.57■□□□□ 0.4
PCDHGA3-202ENST00000612467 CHMP4BQ9H444 224 aaKnown RBP17.56■□□□□ 0.4
PCDHGA3-202ENST00000612467 TSHZ3Q63HK5 1081 aa17.56■□□□□ 0.4
PCDHGA3-202ENST00000612467 MARF1Q9Y4F3 1742 aaKnown RBP17.55■□□□□ 0.4
PCDHGA3-202ENST00000612467 PHF8Q9UPP1 1060 aa17.55■□□□□ 0.4
PCDHGA3-202ENST00000612467 ESCO1Q5FWF5 840 aa17.55■□□□□ 0.4
PCDHGA3-202ENST00000612467 HSCBQ8IWL3 235 aa17.55■□□□□ 0.4
PCDHGA3-202ENST00000612467 RBM25P49756 843 aaKnown RBP17.54■□□□□ 0.4
PCDHGA3-202ENST00000612467 GAS2L2Q8NHY3 880 aa17.54■□□□□ 0.4
PCDHGA3-202ENST00000612467 LRRC59Q96AG4 307 aaKnown RBP17.54■□□□□ 0.4
PCDHGA3-202ENST00000612467 GNAT3A8MTJ3 354 aa17.54■□□□□ 0.4
PCDHGA3-202ENST00000612467 NWD1Q149M9 1564 aa17.53■□□□□ 0.4
PCDHGA3-202ENST00000612467 PTPRCP08575 1304 aa17.53■□□□□ 0.4
PCDHGA3-202ENST00000612467 FKBP5Q13451 457 aaPredicted RBP17.53■□□□□ 0.4
PCDHGA3-202ENST00000612467 EXOC6BQ9Y2D4 811 aa17.53■□□□□ 0.4
PCDHGA3-202ENST00000612467 NBPF6Q5VWK0 638 aa17.52■□□□□ 0.4
PCDHGA3-202ENST00000612467 NBPF4Q96M43 638 aa17.52■□□□□ 0.4
PCDHGA3-202ENST00000612467 LMOD2Q6P5Q4 547 aa17.52■□□□□ 0.39
PCDHGA3-202ENST00000612467 GZF1Q9H116 711 aaPredicted RBP17.52■□□□□ 0.39
PCDHGA3-202ENST00000612467 TTC22Q5TAA0 569 aa17.51■□□□□ 0.39
PCDHGA3-202ENST00000612467 ORAI2Q96SN7 254 aa17.51■□□□□ 0.39
PCDHGA3-202ENST00000612467 LGR6Q9HBX8 967 aa17.51■□□□□ 0.39
PCDHGA3-202ENST00000612467 FLIIQ13045 1269 aa17.51■□□□□ 0.39
PCDHGA3-202ENST00000612467 PHAXQ9H814 394 aaKnown RBP17.5■□□□□ 0.39
PCDHGA3-202ENST00000612467 KCNQ3O43525 872 aa17.5■□□□□ 0.39
PCDHGA3-202ENST00000612467 CDC45O75419 566 aa17.5■□□□□ 0.39
PCDHGA3-202ENST00000612467 RPAP2Q8IXW5 612 aaPredicted RBP17.5■□□□□ 0.39
PCDHGA3-202ENST00000612467 ANXA1P04083 346 aa17.49■□□□□ 0.39
PCDHGA3-202ENST00000612467 EIF2S2P20042 333 aaKnown RBP17.49■□□□□ 0.39
PCDHGA3-202ENST00000612467 PSME1Q06323 249 aa17.49■□□□□ 0.39
PCDHGA3-202ENST00000612467 ANKLE2Q86XL3 938 aa17.49■□□□□ 0.39
PCDHGA3-202ENST00000612467 STK31Q9BXU1 1019 aa17.49■□□□□ 0.39
PCDHGA3-202ENST00000612467 PNMA6EA0A0J9YXQ4 647 aa17.49■□□□□ 0.39
PCDHGA3-202ENST00000612467 SDSP20132 328 aa17.49■□□□□ 0.39
PCDHGA3-202ENST00000612467 KIF24Q5T7B8 1368 aa17.48■□□□□ 0.39
PCDHGA3-202ENST00000612467 ANKARQ7Z5J8 1434 aa17.48■□□□□ 0.39
PCDHGA3-202ENST00000612467 HSP90AB1P08238 724 aaKnown RBP17.48■□□□□ 0.39
PCDHGA3-202ENST00000612467 HAP1P54257 671 aaPredicted RBP17.48■□□□□ 0.39
PCDHGA3-202ENST00000612467 MAP3K5Q99683 1374 aa17.48■□□□□ 0.39
PCDHGA3-202ENST00000612467 CHMP5Q9NZZ3 219 aa17.47■□□□□ 0.39
PCDHGA3-202ENST00000612467 MCM4P33991 863 aa17.47■□□□□ 0.39
PCDHGA3-202ENST00000612467 LTN1O94822 1766 aa17.46■□□□□ 0.39
PCDHGA3-202ENST00000612467 TAF7Q15545 349 aaPredicted RBP17.46■□□□□ 0.39
PCDHGA3-202ENST00000612467 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
PCDHGA3-202ENST00000612467 MPRIPQ6WCQ1 1025 aa17.45■□□□□ 0.38
PCDHGA3-202ENST00000612467 LRRFIP2Q9Y608 721 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms