RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 HSP90AB2PQ58FF8 381 aa10.29□□□□□ -0.76
TMCO1-208ENST00000612311 BMP2KLQ5H9B9 411 aa10.29□□□□□ -0.76
TMCO1-208ENST00000612311 ARHGAP45Q92619 1136 aa10.29□□□□□ -0.76
TMCO1-208ENST00000612311 SDF4Q9BRK5 362 aa10.29□□□□□ -0.76
TMCO1-208ENST00000612311 POLKQ9UBT6 870 aa10.29□□□□□ -0.76
TMCO1-208ENST00000612311 TNRQ92752 1358 aa10.29□□□□□ -0.76
TMCO1-208ENST00000612311 PES1O00541 588 aaKnown RBP10.28□□□□□ -0.76
TMCO1-208ENST00000612311 CLSTN1O94985 981 aa10.28□□□□□ -0.76
TMCO1-208ENST00000612311 HDAC1Q13547 482 aaPredicted RBP10.28□□□□□ -0.76
TMCO1-208ENST00000612311 CCDC158Q5M9N0 1113 aa10.28□□□□□ -0.76
TMCO1-208ENST00000612311 GLRX3O76003 335 aaKnown RBP10.28□□□□□ -0.76
TMCO1-208ENST00000612311 TPM3P06753 285 aa10.28□□□□□ -0.76
TMCO1-208ENST00000612311 BLOC1S2Q6QNY1 142 aa10.28□□□□□ -0.76
TMCO1-208ENST00000612311 RAB11FIP3O75154 756 aa10.28□□□□□ -0.76
TMCO1-208ENST00000612311 ANKRD1Q15327 319 aa10.28□□□□□ -0.76
TMCO1-208ENST00000612311 UHRF1BP1LA0JNW5 1464 aa10.27□□□□□ -0.76
TMCO1-208ENST00000612311 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.27□□□□□ -0.76
TMCO1-208ENST00000612311 UPF3BQ9BZI7 483 aaKnown RBP10.27□□□□□ -0.76
TMCO1-208ENST00000612311 LRRFIP2Q9Y608 721 aaKnown RBP10.27□□□□□ -0.76
TMCO1-208ENST00000612311 MPRIPQ6WCQ1 1025 aa10.27□□□□□ -0.77
TMCO1-208ENST00000612311 DNAAF4Q8WXU2 420 aa10.27□□□□□ -0.77
TMCO1-208ENST00000612311 CNNM1Q9NRU3 951 aa10.27□□□□□ -0.77
TMCO1-208ENST00000612311 HOOK1Q9UJC3 728 aaKnown RBP10.27□□□□□ -0.77
TMCO1-208ENST00000612311 PBRM1Q86U86 1689 aa10.27□□□□□ -0.77
TMCO1-208ENST00000612311 IL27Q8NEV9 243 aa10.27□□□□□ -0.77
TMCO1-208ENST00000612311 JAKMIP1Q96N16 626 aaKnown RBP10.27□□□□□ -0.77
TMCO1-208ENST00000612311 CEP126Q9P2H0 1117 aa10.27□□□□□ -0.77
TMCO1-208ENST00000612311 LETM1O95202 739 aaPredicted RBP10.27□□□□□ -0.77
TMCO1-208ENST00000612311 CCDC57Q2TAC2 916 aa10.27□□□□□ -0.77
TMCO1-208ENST00000612311 LARP1Q6PKG0 1096 aaKnown RBP10.27□□□□□ -0.77
TMCO1-208ENST00000612311 AEBP1Q8IUX7 1158 aa10.27□□□□□ -0.77
TMCO1-208ENST00000612311 FBXW7Q969H0 707 aa10.27□□□□□ -0.77
TMCO1-208ENST00000612311 TBC1D32Q96NH3 1257 aa10.27□□□□□ -0.77
TMCO1-208ENST00000612311 NPC1L1Q9UHC9 1359 aa10.26□□□□□ -0.77
TMCO1-208ENST00000612311 TSPY26PQ9H489 355 aa10.26□□□□□ -0.77
TMCO1-208ENST00000612311 GRPEL1Q9HAV7 217 aa10.26□□□□□ -0.77
TMCO1-208ENST00000612311 SPINK5Q9NQ38 1064 aaPredicted RBP10.26□□□□□ -0.77
TMCO1-208ENST00000612311 DBF4Q9UBU7 674 aaPredicted RBP10.26□□□□□ -0.77
TMCO1-208ENST00000612311 DHX16O60231 1041 aaKnown RBP10.26□□□□□ -0.77
TMCO1-208ENST00000612311 TPM1P09493 284 aa10.26□□□□□ -0.77
TMCO1-208ENST00000612311 TTC39AQ5SRH9 613 aa10.26□□□□□ -0.77
TMCO1-208ENST00000612311 ZNF592Q92610 1267 aa10.26□□□□□ -0.77
TMCO1-208ENST00000612311 TNNQ9UQP3 1299 aa10.26□□□□□ -0.77
TMCO1-208ENST00000612311 RLBP1P12271 317 aa10.25□□□□□ -0.77
TMCO1-208ENST00000612311 STK3Q13188 491 aa10.25□□□□□ -0.77
TMCO1-208ENST00000612311 LARP1BQ659C4 914 aaKnown RBP10.25□□□□□ -0.77
TMCO1-208ENST00000612311 TBC1D9Q6ZT07 1266 aa10.25□□□□□ -0.77
TMCO1-208ENST00000612311 CCDC39Q9UFE4 941 aa10.25□□□□□ -0.77
TMCO1-208ENST00000612311 ZRANB1Q9UGI0 708 aa10.25□□□□□ -0.77
TMCO1-208ENST00000612311 RIMS2Q9UQ26 1411 aa10.25□□□□□ -0.77
TMCO1-208ENST00000612311 TSR1Q2NL82 804 aaKnown RBP10.25□□□□□ -0.77
TMCO1-208ENST00000612311 ZSCAN31Q96LW9 406 aaPredicted RBP10.25□□□□□ -0.77
TMCO1-208ENST00000612311 PDRG1Q9NUG6 133 aa10.25□□□□□ -0.77
TMCO1-208ENST00000612311 KINO60870 393 aaKnown RBP10.25□□□□□ -0.77
TMCO1-208ENST00000612311 KRT85P78386 507 aa10.25□□□□□ -0.77
TMCO1-208ENST00000612311 SART3Q15020 963 aaKnown RBP10.25□□□□□ -0.77
TMCO1-208ENST00000612311 CCDC173Q0VFZ6 552 aa10.25□□□□□ -0.77
TMCO1-208ENST00000612311 C8orf58Q8NAV2 365 aa10.25□□□□□ -0.77
TMCO1-208ENST00000612311 PPIP5K1Q6PFW1 1433 aa10.25□□□□□ -0.77
TMCO1-208ENST00000612311 SPATA31E1Q6ZUB1 1445 aa10.25□□□□□ -0.77
TMCO1-208ENST00000612311 A0A1W2PP64 1363 aa10.24□□□□□ -0.77
TMCO1-208ENST00000612311 TTC21AQ8NDW8 1320 aa10.24□□□□□ -0.77
TMCO1-208ENST00000612311 VPS53Q5VIR6 699 aa10.24□□□□□ -0.77
TMCO1-208ENST00000612311 PTCD1O75127 700 aaKnown RBP10.24□□□□□ -0.77
TMCO1-208ENST00000612311 NUCB1Q02818 461 aa10.24□□□□□ -0.77
TMCO1-208ENST00000612311 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.24□□□□□ -0.777e-8■■□□□ 12.3
TMCO1-208ENST00000612311 FKBP4Q02790 459 aaKnown RBP eCLIP10.24□□□□□ -0.77
TMCO1-208ENST00000612311 EIF4A2Q14240 407 aaKnown RBP10.23□□□□□ -0.77
TMCO1-208ENST00000612311 KRT32Q14532 448 aa10.23□□□□□ -0.77
TMCO1-208ENST00000612311 MEIS3Q99687 375 aa10.23□□□□□ -0.77
TMCO1-208ENST00000612311 CEBPZQ03701 1054 aaKnown RBP10.23□□□□□ -0.77
TMCO1-208ENST00000612311 C8orf34Q49A92 452 aa10.23□□□□□ -0.77
TMCO1-208ENST00000612311 MRPL50Q8N5N7 158 aaKnown RBP10.23□□□□□ -0.77
TMCO1-208ENST00000612311 ANKRD20A12PQ8NF67 263 aa10.23□□□□□ -0.77
TMCO1-208ENST00000612311 ZNF396Q96N95 335 aaPredicted RBP10.23□□□□□ -0.77
TMCO1-208ENST00000612311 TRIM5Q9C035 493 aa10.23□□□□□ -0.77
TMCO1-208ENST00000612311 NAT10Q9H0A0 1025 aaKnown RBP10.23□□□□□ -0.77
TMCO1-208ENST00000612311 VAMP4O75379 141 aa10.23□□□□□ -0.77
TMCO1-208ENST00000612311 XBP1P17861 261 aa10.23□□□□□ -0.77
TMCO1-208ENST00000612311 CASTP20810 708 aaKnown RBP10.23□□□□□ -0.77
TMCO1-208ENST00000612311 CCDC47Q96A33 483 aaKnown RBP10.23□□□□□ -0.77
TMCO1-208ENST00000612311 BOLA2Q9H3K6 86 aa10.23□□□□□ -0.77
TMCO1-208ENST00000612311 TARBP1Q13395 1621 aaKnown RBP10.23□□□□□ -0.77
TMCO1-208ENST00000612311 PI4KAP2A4QPH2 592 aa10.22□□□□□ -0.77
TMCO1-208ENST00000612311 STK38Q15208 465 aa10.22□□□□□ -0.77
TMCO1-208ENST00000612311 PI4KAP1Q8N8J0 262 aa10.22□□□□□ -0.77
TMCO1-208ENST00000612311 PHACTR3Q96KR7 559 aa10.22□□□□□ -0.77
TMCO1-208ENST00000612311 MYD88Q99836 296 aa10.22□□□□□ -0.77
TMCO1-208ENST00000612311 HYPKQ9NX55 129 aa10.22□□□□□ -0.77
TMCO1-208ENST00000612311 FAM13BQ9NYF5 915 aa10.22□□□□□ -0.77
TMCO1-208ENST00000612311 RAD21O60216 631 aa10.22□□□□□ -0.77
TMCO1-208ENST00000612311 RRP12Q5JTH9 1297 aaKnown RBP10.22□□□□□ -0.77
TMCO1-208ENST00000612311 HOMER1Q86YM7 354 aa10.22□□□□□ -0.77
TMCO1-208ENST00000612311 KDM4AO75164 1064 aa10.22□□□□□ -0.77
TMCO1-208ENST00000612311 ATP2B1P20020 1258 aa10.22□□□□□ -0.77
TMCO1-208ENST00000612311 MPHOSPH8Q99549 860 aa10.22□□□□□ -0.77
TMCO1-208ENST00000612311 CEP170Q5SW79 1584 aa10.22□□□□□ -0.77
TMCO1-208ENST00000612311 TTC22Q5TAA0 569 aa10.21□□□□□ -0.77
TMCO1-208ENST00000612311 KRT28Q7Z3Y7 464 aa10.21□□□□□ -0.77
TMCO1-208ENST00000612311 CCAR2Q8N163 923 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms