RNA–Protein interactions for RNA: ENST00000611739.4

EP400-207, Transcript of E1A binding protein p400, humanhuman

TSL 1 (best)

Gene EP400, Length 4,314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EP400-207ENST00000611739 GTF2E1P29083 439 aaPredicted RBP12.36□□□□□ -0.43
EP400-207ENST00000611739 TRIM29Q14134 588 aa12.36□□□□□ -0.43
EP400-207ENST00000611739 C16orf71Q8IYS4 520 aaPredicted RBP12.36□□□□□ -0.43
EP400-207ENST00000611739 MEIS3Q99687 375 aa12.36□□□□□ -0.43
EP400-207ENST00000611739 LRRFIP2Q9Y608 721 aaKnown RBP12.36□□□□□ -0.43
EP400-207ENST00000611739 KDM6BO15054 1643 aa12.36□□□□□ -0.43
EP400-207ENST00000611739 ANKRD36BQ8N2N9 1353 aa12.36□□□□□ -0.43
EP400-207ENST00000611739 ERC1Q8IUD2 1116 aa12.36□□□□□ -0.43
EP400-207ENST00000611739 ADAMTS12P58397 1594 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 DUOX2Q9NRD8 1548 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 GNAT3A8MTJ3 354 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 CASTP20810 708 aaKnown RBP12.35□□□□□ -0.43
EP400-207ENST00000611739 MYL6BP14649 208 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 KRT85P78386 507 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 AKAP17AQ02040 695 aaKnown RBP12.35□□□□□ -0.43
EP400-207ENST00000611739 SMC5Q8IY18 1101 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 USHBP1Q8N6Y0 703 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 ZBTB40Q9NUA8 1239 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
EP400-207ENST00000611739 UQCRHLA0A096LP55 91 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 UQCRHP07919 91 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 CCDC192P0DO97 292 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 XPCQ01831 940 aaPredicted RBP12.35□□□□□ -0.43
EP400-207ENST00000611739 TTC22Q5TAA0 569 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 BLOC1S2Q6QNY1 142 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 NFXL1Q6ZNB6 911 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 PDRG1Q9NUG6 133 aa12.35□□□□□ -0.43
EP400-207ENST00000611739 KINO60870 393 aaKnown RBP12.34□□□□□ -0.43
EP400-207ENST00000611739 SDSP20132 328 aa12.34□□□□□ -0.43
EP400-207ENST00000611739 EVA1CP58658 441 aa12.34□□□□□ -0.43
EP400-207ENST00000611739 TPD52L1Q16890 204 aaPredicted RBP12.34□□□□□ -0.43
EP400-207ENST00000611739 ZRANB1Q9UGI0 708 aa12.34□□□□□ -0.43
EP400-207ENST00000611739 CCDC83Q8IWF9 413 aa12.34□□□□□ -0.43
EP400-207ENST00000611739 HIP1O00291 1037 aa12.34□□□□□ -0.43
EP400-207ENST00000611739 PHACTR3Q96KR7 559 aa12.34□□□□□ -0.43
EP400-207ENST00000611739 FLIIQ13045 1269 aa12.33□□□□□ -0.43
EP400-207ENST00000611739 KRT24Q2M2I5 525 aa12.33□□□□□ -0.43
EP400-207ENST00000611739 SYTL4Q96C24 671 aaPredicted RBP12.33□□□□□ -0.43
EP400-207ENST00000611739 KIF1BPQ96EK5 621 aa12.33□□□□□ -0.43
EP400-207ENST00000611739 POLKQ9UBT6 870 aa12.33□□□□□ -0.43
EP400-207ENST00000611739 TAF7Q15545 349 aaPredicted RBP12.33□□□□□ -0.44
EP400-207ENST00000611739 TNMDQ9H2S6 317 aa12.33□□□□□ -0.44
EP400-207ENST00000611739 ADGRL2O95490 1459 aa12.33□□□□□ -0.44
EP400-207ENST00000611739 HMGN5P82970 282 aaKnown RBP12.33□□□□□ -0.44
EP400-207ENST00000611739 AEBP1Q8IUX7 1158 aa12.33□□□□□ -0.44
EP400-207ENST00000611739 SHANK2Q9UPX8 1470 aa12.33□□□□□ -0.44
EP400-207ENST00000611739 BTBD11A6QL63 1104 aa12.33□□□□□ -0.44
EP400-207ENST00000611739 TPM3P06753 285 aa12.33□□□□□ -0.44
EP400-207ENST00000611739 ARHGAP45Q92619 1136 aa12.33□□□□□ -0.44
EP400-207ENST00000611739 KLHL40Q2TBA0 621 aa12.32□□□□□ -0.44
EP400-207ENST00000611739 HSP90AB2PQ58FF8 381 aa12.32□□□□□ -0.44
EP400-207ENST00000611739 PRPF40BQ6NWY9 871 aaKnown RBP12.32□□□□□ -0.44
EP400-207ENST00000611739 MRPL50Q8N5N7 158 aaKnown RBP12.32□□□□□ -0.44
EP400-207ENST00000611739 SAMD9Q5K651 1589 aa12.32□□□□□ -0.44
EP400-207ENST00000611739 VAMP4O75379 141 aa12.32□□□□□ -0.44
EP400-207ENST00000611739 SPG7Q9UQ90 795 aa12.31□□□□□ -0.44
EP400-207ENST00000611739 ZMYM4Q5VZL5 1548 aa12.31□□□□□ -0.44
EP400-207ENST00000611739 GLRX3O76003 335 aaKnown RBP12.31□□□□□ -0.44
EP400-207ENST00000611739 ATP2B1P20020 1258 aa12.31□□□□□ -0.44
EP400-207ENST00000611739 CAMK4Q16566 473 aa12.3□□□□□ -0.44
EP400-207ENST00000611739 DDX11Q96FC9 970 aa12.3□□□□□ -0.44
EP400-207ENST00000611739 SPATA32Q96LK8 384 aa12.3□□□□□ -0.44
EP400-207ENST00000611739 BLMP54132 1417 aaPredicted RBP12.3□□□□□ -0.44
EP400-207ENST00000611739 USP25Q9UHP3 1055 aa12.3□□□□□ -0.44
EP400-207ENST00000611739 PTPRCP08575 1304 aa12.3□□□□□ -0.44
EP400-207ENST00000611739 ME1P48163 572 aa12.3□□□□□ -0.44
EP400-207ENST00000611739 AEBP2Q6ZN18 517 aaPredicted RBP12.3□□□□□ -0.44
EP400-207ENST00000611739 BOLA2Q9H3K6 86 aa12.3□□□□□ -0.44
EP400-207ENST00000611739 THEMISQ8N1K5 641 aaPredicted RBP12.3□□□□□ -0.44
EP400-207ENST00000611739 ANKRD44Q8N8A2 993 aa12.3□□□□□ -0.44
EP400-207ENST00000611739 SNX21Q969T3 373 aa12.3□□□□□ -0.44
EP400-207ENST00000611739 NUP62CLQ9H1M0 184 aa12.3□□□□□ -0.44
EP400-207ENST00000611739 ANXA1P04083 346 aa12.29□□□□□ -0.44
EP400-207ENST00000611739 ANKRD1Q15327 319 aa12.29□□□□□ -0.44
EP400-207ENST00000611739 TMX3Q96JJ7 454 aa12.29□□□□□ -0.44
EP400-207ENST00000611739 SMC2O95347 1197 aa12.29□□□□□ -0.44
EP400-207ENST00000611739 MAPK8IP2Q13387 824 aaPredicted RBP12.29□□□□□ -0.44
EP400-207ENST00000611739 STK38Q15208 465 aa12.29□□□□□ -0.44
EP400-207ENST00000611739 ZSCAN31Q96LW9 406 aaPredicted RBP12.29□□□□□ -0.44
EP400-207ENST00000611739 NAT10Q9H0A0 1025 aaKnown RBP12.29□□□□□ -0.44
EP400-207ENST00000611739 RBM33Q96EV2 1170 aaKnown RBP12.29□□□□□ -0.44
EP400-207ENST00000611739 NPC1L1Q9UHC9 1359 aa12.28□□□□□ -0.44
EP400-207ENST00000611739 RAB11FIP3O75154 756 aa12.28□□□□□ -0.44
EP400-207ENST00000611739 PDE1AP54750 535 aa12.28□□□□□ -0.44
EP400-207ENST00000611739 ZSCAN23Q3MJ62 389 aa12.28□□□□□ -0.44
EP400-207ENST00000611739 CCDC8Q9H0W5 538 aaPredicted RBP12.28□□□□□ -0.44
EP400-207ENST00000611739 FILIP1Q7Z7B0 1213 aa12.28□□□□□ -0.44
EP400-207ENST00000611739 A0A1W2PP64 1363 aa12.28□□□□□ -0.44
EP400-207ENST00000611739 ATF3P18847 181 aa12.28□□□□□ -0.44
EP400-207ENST00000611739 CLCN1P35523 988 aa12.28□□□□□ -0.44
EP400-207ENST00000611739 SAFBQ15424 915 aaKnown RBP eCLIP12.28□□□□□ -0.44
EP400-207ENST00000611739 MNS1Q8NEH6 495 aa12.28□□□□□ -0.44
EP400-207ENST00000611739 TPM1P09493 284 aa12.27□□□□□ -0.44
EP400-207ENST00000611739 ZC3H6P61129 1189 aaKnown RBP12.27□□□□□ -0.44
EP400-207ENST00000611739 MPRIPQ6WCQ1 1025 aa12.27□□□□□ -0.44
EP400-207ENST00000611739 PPP1R42Q7Z4L9 355 aa12.27□□□□□ -0.44
EP400-207ENST00000611739 PPP6R1Q9UPN7 881 aa12.27□□□□□ -0.44
EP400-207ENST00000611739 LIMCH1Q9UPQ0 1083 aa12.27□□□□□ -0.44
EP400-207ENST00000611739 EIF2AK4Q9P2K8 1649 aaKnown RBP12.27□□□□□ -0.45
EP400-207ENST00000611739 ZGPATQ8N5A5 531 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms