RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 C1orf167Q5SNV9 1468 aa23.84■■□□□ 1.41
SEMA3B-210ENST00000611067 RBM25P49756 843 aaKnown RBP23.84■■□□□ 1.41
SEMA3B-210ENST00000611067 KIF1AQ12756 1690 aa23.83■■□□□ 1.41
SEMA3B-210ENST00000611067 SBNO1A3KN83 1393 aa23.83■■□□□ 1.41
SEMA3B-210ENST00000611067 MARF1Q9Y4F3 1742 aaKnown RBP23.83■■□□□ 1.41
SEMA3B-210ENST00000611067 FLT4P35916 1363 aa23.83■■□□□ 1.4
SEMA3B-210ENST00000611067 TRIM27P14373 513 aa23.82■■□□□ 1.4
SEMA3B-210ENST00000611067 EIF4A2Q14240 407 aaKnown RBP23.82■■□□□ 1.4
SEMA3B-210ENST00000611067 SMC4Q9NTJ3 1288 aa23.82■■□□□ 1.4
SEMA3B-210ENST00000611067 FOXO3O43524 673 aa23.81■■□□□ 1.4
SEMA3B-210ENST00000611067 AMPHP49418 695 aa23.81■■□□□ 1.4
SEMA3B-210ENST00000611067 HSP90AB2PQ58FF8 381 aa23.81■■□□□ 1.4
SEMA3B-210ENST00000611067 HSP90AA1P07900 732 aaKnown RBP23.81■■□□□ 1.4
SEMA3B-210ENST00000611067 RIPK4P57078 832 aa23.81■■□□□ 1.4
SEMA3B-210ENST00000611067 CIZ1Q9ULV3 898 aaPredicted RBP23.81■■□□□ 1.4
SEMA3B-210ENST00000611067 ESPNB1AK53 854 aa23.8■■□□□ 1.4
SEMA3B-210ENST00000611067 ATF7IPQ6VMQ6 1270 aa23.79■■□□□ 1.4
SEMA3B-210ENST00000611067 ITPRIPQ8IWB1 547 aa23.79■■□□□ 1.4
SEMA3B-210ENST00000611067 MSH6P52701 1360 aa23.79■■□□□ 1.4
SEMA3B-210ENST00000611067 RRP9O43818 475 aaKnown RBP23.79■■□□□ 1.4
SEMA3B-210ENST00000611067 CADPS2Q86UW7 1296 aa23.79■■□□□ 1.4
SEMA3B-210ENST00000611067 MST1RQ04912 1400 aa23.78■■□□□ 1.4
SEMA3B-210ENST00000611067 TSR2Q969E8 191 aaKnown RBP23.78■■□□□ 1.4
SEMA3B-210ENST00000611067 KIF24Q5T7B8 1368 aa23.78■■□□□ 1.4
SEMA3B-210ENST00000611067 EXOSC9Q06265 439 aaKnown RBP23.77■■□□□ 1.4
SEMA3B-210ENST00000611067 TRIM35Q9UPQ4 493 aa23.77■■□□□ 1.4
SEMA3B-210ENST00000611067 TNPO1Q92973 898 aaKnown RBP23.77■■□□□ 1.4
SEMA3B-210ENST00000611067 HSP90AA2PQ14568 343 aaPredicted RBP23.76■■□□□ 1.39
SEMA3B-210ENST00000611067 SSH1Q8WYL5 1049 aa23.76■■□□□ 1.39
SEMA3B-210ENST00000611067 GBP4Q96PP9 640 aa23.76■■□□□ 1.39
SEMA3B-210ENST00000611067 XPCQ01831 940 aaPredicted RBP23.76■■□□□ 1.39
SEMA3B-210ENST00000611067 PTMSP20962 102 aa23.75■■□□□ 1.39
SEMA3B-210ENST00000611067 NFE2L2Q16236 605 aa23.75■■□□□ 1.39
SEMA3B-210ENST00000611067 SKOR2Q2VWA4 1001 aaPredicted RBP23.75■■□□□ 1.39
SEMA3B-210ENST00000611067 PHACTR3Q96KR7 559 aa23.75■■□□□ 1.39
SEMA3B-210ENST00000611067 RAB3GAP1Q15042 981 aa23.75■■□□□ 1.39
SEMA3B-210ENST00000611067 SULT6B1Q6IMI4 303 aa23.75■■□□□ 1.39
SEMA3B-210ENST00000611067 ZBTB40Q9NUA8 1239 aa23.75■■□□□ 1.39
SEMA3B-210ENST00000611067 NUCB1Q02818 461 aa23.74■■□□□ 1.39
SEMA3B-210ENST00000611067 ERBB4Q15303 1308 aa23.74■■□□□ 1.39
SEMA3B-210ENST00000611067 RGPD1P0DJD0 1748 aa23.74■■□□□ 1.39
SEMA3B-210ENST00000611067 TRIM44Q96DX7 344 aaPredicted RBP23.73■■□□□ 1.39
SEMA3B-210ENST00000611067 KRT28Q7Z3Y7 464 aa23.73■■□□□ 1.39
SEMA3B-210ENST00000611067 KCNH5Q8NCM2 988 aa23.73■■□□□ 1.39
SEMA3B-210ENST00000611067 IL16Q14005 1332 aa23.72■■□□□ 1.39
SEMA3B-210ENST00000611067 NOB1Q9ULX3 412 aaKnown RBP23.72■■□□□ 1.39
SEMA3B-210ENST00000611067 ARHGEF10O15013 1369 aa23.72■■□□□ 1.39
SEMA3B-210ENST00000611067 LMOD2Q6P5Q4 547 aa23.72■■□□□ 1.39
SEMA3B-210ENST00000611067 TMEM57Q8N5G2 664 aa23.72■■□□□ 1.39
SEMA3B-210ENST00000611067 XIRP1Q702N8 1843 aaKnown RBP23.72■■□□□ 1.39
SEMA3B-210ENST00000611067 TRPM3Q9HCF6 1732 aaPredicted RBP23.72■■□□□ 1.39
SEMA3B-210ENST00000611067 RTL1A6NKG5 1358 aa23.71■■□□□ 1.39
SEMA3B-210ENST00000611067 HSP90AB1P08238 724 aaKnown RBP23.71■■□□□ 1.39
SEMA3B-210ENST00000611067 HOXC9P31274 260 aa23.71■■□□□ 1.39
SEMA3B-210ENST00000611067 GAS2L3Q86XJ1 694 aa23.71■■□□□ 1.39
SEMA3B-210ENST00000611067 AEBP1Q8IUX7 1158 aa23.71■■□□□ 1.39
SEMA3B-210ENST00000611067 LTN1O94822 1766 aa23.71■■□□□ 1.39
SEMA3B-210ENST00000611067 ZNF335Q9H4Z2 1342 aaPredicted RBP23.71■■□□□ 1.39
SEMA3B-210ENST00000611067 NFAT5O94916 1531 aa23.7■■□□□ 1.38
SEMA3B-210ENST00000611067 KIF16BQ96L93 1317 aa23.69■■□□□ 1.38
SEMA3B-210ENST00000611067 LMOD3Q0VAK6 560 aa23.69■■□□□ 1.38
SEMA3B-210ENST00000611067 IPO8O15397 1037 aaKnown RBP23.68■■□□□ 1.38
SEMA3B-210ENST00000611067 BMP2KLQ5H9B9 411 aa23.68■■□□□ 1.38
SEMA3B-210ENST00000611067 CHD1LQ86WJ1 897 aa23.68■■□□□ 1.38
SEMA3B-210ENST00000611067 CALD1Q05682 793 aaKnown RBP23.67■■□□□ 1.38
SEMA3B-210ENST00000611067 KIF2CQ99661 725 aa23.67■■□□□ 1.38
SEMA3B-210ENST00000611067 LNPKQ9C0E8 428 aa23.67■■□□□ 1.38
SEMA3B-210ENST00000611067 DLG5Q8TDM6 1919 aa23.66■■□□□ 1.38
SEMA3B-210ENST00000611067 NPHP3Q7Z494 1330 aa23.66■■□□□ 1.38
SEMA3B-210ENST00000611067 IGSF1Q8N6C5 1336 aa23.65■■□□□ 1.38
SEMA3B-210ENST00000611067 SLIT3O75094 1523 aa23.65■■□□□ 1.38
SEMA3B-210ENST00000611067 EYA1Q99502 592 aa23.64■■□□□ 1.38
SEMA3B-210ENST00000611067 KDRP35968 1356 aa23.64■■□□□ 1.37
SEMA3B-210ENST00000611067 GCP02774 474 aa23.64■■□□□ 1.37
SEMA3B-210ENST00000611067 IP6K1Q92551 441 aa23.63■■□□□ 1.37
SEMA3B-210ENST00000611067 ALS2Q96Q42 1657 aa23.63■■□□□ 1.37
SEMA3B-210ENST00000611067 ZBTB7CA1YPR0 619 aa23.63■■□□□ 1.37
SEMA3B-210ENST00000611067 ALDH1L2Q3SY69 923 aa23.63■■□□□ 1.37
SEMA3B-210ENST00000611067 K7ELQ4 463 aaPredicted RBP23.62■■□□□ 1.37
SEMA3B-210ENST00000611067 PLEKHG5O94827 1062 aa23.62■■□□□ 1.37
SEMA3B-210ENST00000611067 TPM2P07951 284 aa23.62■■□□□ 1.37
SEMA3B-210ENST00000611067 PHRF1Q9P1Y6 1649 aaKnown RBP23.62■■□□□ 1.37
SEMA3B-210ENST00000611067 CCDC173Q0VFZ6 552 aa23.62■■□□□ 1.37
SEMA3B-210ENST00000611067 LTV1Q96GA3 475 aaPredicted RBP23.62■■□□□ 1.37
SEMA3B-210ENST00000611067 CLEC17AQ6ZS10 378 aa23.61■■□□□ 1.37
SEMA3B-210ENST00000611067 DDX17Q92841 729 aaKnown RBP23.61■■□□□ 1.37
SEMA3B-210ENST00000611067 PKNOX2Q96KN3 472 aa23.6■■□□□ 1.37
SEMA3B-210ENST00000611067 PPP1R9BQ96SB3 815 aa23.6■■□□□ 1.37
SEMA3B-210ENST00000611067 IBTKQ9P2D0 1353 aaPredicted RBP23.6■■□□□ 1.37
SEMA3B-210ENST00000611067 CD2BP2O95400 341 aaKnown RBP23.59■■□□□ 1.37
SEMA3B-210ENST00000611067 VSIG10Q8N0Z9 540 aa23.59■■□□□ 1.37
SEMA3B-210ENST00000611067 GCC1Q96CN9 775 aa23.59■■□□□ 1.37
SEMA3B-210ENST00000611067 THUMPD2Q9BTF0 503 aaKnown RBP23.59■■□□□ 1.37
SEMA3B-210ENST00000611067 GOLGA6L22H0YM25 854 aa23.58■■□□□ 1.37
SEMA3B-210ENST00000611067 GNAI1P63096 354 aa23.58■■□□□ 1.37
SEMA3B-210ENST00000611067 BRPF1P55201 1214 aaPredicted RBP23.58■■□□□ 1.36
SEMA3B-210ENST00000611067 IFT57Q9NWB7 429 aa23.58■■□□□ 1.36
SEMA3B-210ENST00000611067 ARHGEF25Q86VW2 580 aa23.57■■□□□ 1.36
SEMA3B-210ENST00000611067 TNS3Q68CZ2 1445 aa23.56■■□□□ 1.36
SEMA3B-210ENST00000611067 FAM83GA6ND36 823 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms