RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 MINK1Q8N4C8 1332 aaPredicted RBP23.66■■□□□ 1.38
COL15A1-205ENST00000610452 SLFN5Q08AF3 891 aa23.66■■□□□ 1.38
COL15A1-205ENST00000610452 KIAA1328Q86T90 577 aa23.66■■□□□ 1.38
COL15A1-205ENST00000610452 MTHFSP49914 203 aa23.66■■□□□ 1.38
COL15A1-205ENST00000610452 WASHC4Q2M389 1173 aa23.66■■□□□ 1.38
COL15A1-205ENST00000610452 WDR97A6NE52 1622 aa23.66■■□□□ 1.38
COL15A1-205ENST00000610452 ZFYVE27Q5T4F4 411 aa23.66■■□□□ 1.38
COL15A1-205ENST00000610452 WDR63Q8IWG1 891 aa23.65■■□□□ 1.38
COL15A1-205ENST00000610452 CCDC91Q7Z6B0 441 aa23.65■■□□□ 1.38
COL15A1-205ENST00000610452 FERMT3Q86UX7 667 aa23.65■■□□□ 1.38
COL15A1-205ENST00000610452 HMOX1P09601 288 aa23.65■■□□□ 1.38
COL15A1-205ENST00000610452 ZNF397Q8NF99 534 aaPredicted RBP23.65■■□□□ 1.38
COL15A1-205ENST00000610452 MICALL1Q8N3F8 863 aa23.64■■□□□ 1.38
COL15A1-205ENST00000610452 SCAND2PQ9GZW5 306 aaPredicted RBP23.64■■□□□ 1.38
COL15A1-205ENST00000610452 DDX58O95786 925 aaKnown RBP23.64■■□□□ 1.38
COL15A1-205ENST00000610452 LUZP1Q86V48 1076 aa23.64■■□□□ 1.38
COL15A1-205ENST00000610452 CKAP2LQ8IYA6 745 aa23.64■■□□□ 1.38
COL15A1-205ENST00000610452 ANKRD50Q9ULJ7 1429 aa23.64■■□□□ 1.37
COL15A1-205ENST00000610452 SLC26A8Q96RN1 970 aa23.64■■□□□ 1.37
COL15A1-205ENST00000610452 GOLGA6L10A0A0M3HER8 536 aa23.64■■□□□ 1.37
COL15A1-205ENST00000610452 TOP1P11387 765 aaKnown RBP23.64■■□□□ 1.37
COL15A1-205ENST00000610452 CASKIN1Q8WXD9 1431 aa23.63■■□□□ 1.37
COL15A1-205ENST00000610452 JAKMIP1Q96N16 626 aaKnown RBP23.63■■□□□ 1.37
COL15A1-205ENST00000610452 ARFGAP3Q9NP61 516 aa23.63■■□□□ 1.37
COL15A1-205ENST00000610452 GNAI2P04899 355 aa23.63■■□□□ 1.37
COL15A1-205ENST00000610452 HCLS1P14317 486 aaPredicted RBP23.63■■□□□ 1.37
COL15A1-205ENST00000610452 TXLNAP40222 546 aa23.63■■□□□ 1.37
COL15A1-205ENST00000610452 MEX3CQ5U5Q3 659 aaKnown RBP23.63■■□□□ 1.37
COL15A1-205ENST00000610452 BLOC1S2Q6QNY1 142 aa23.62■■□□□ 1.37
COL15A1-205ENST00000610452 GDPD2Q9HCC8 539 aa23.62■■□□□ 1.37
COL15A1-205ENST00000610452 TWISTNBQ3B726 338 aaPredicted RBP23.62■■□□□ 1.37
COL15A1-205ENST00000610452 STAC3Q96MF2 364 aa23.62■■□□□ 1.37
COL15A1-205ENST00000610452 TTC12Q9H892 705 aaPredicted RBP23.61■■□□□ 1.37
COL15A1-205ENST00000610452 NEUROD6Q96NK8 337 aa23.61■■□□□ 1.37
COL15A1-205ENST00000610452 ANKRD62A6NC57 917 aa23.61■■□□□ 1.37
COL15A1-205ENST00000610452 CAPN2P17655 700 aa23.61■■□□□ 1.37
COL15A1-205ENST00000610452 PLEKHH1Q9ULM0 1364 aa23.6■■□□□ 1.37
COL15A1-205ENST00000610452 RAI14Q9P0K7 980 aa23.6■■□□□ 1.37
COL15A1-205ENST00000610452 TMX1Q9H3N1 280 aa23.6■■□□□ 1.37
COL15A1-205ENST00000610452 FYCO1Q9BQS8 1478 aa23.6■■□□□ 1.37
COL15A1-205ENST00000610452 STIM1Q13586 685 aa23.59■■□□□ 1.37
COL15A1-205ENST00000610452 FANCD2Q9BXW9 1451 aa23.59■■□□□ 1.37
COL15A1-205ENST00000610452 SRCIN1Q9C0H9 1055 aa23.59■■□□□ 1.37
COL15A1-205ENST00000610452 FGD5Q6ZNL6 1462 aa23.59■■□□□ 1.37
COL15A1-205ENST00000610452 TERF1P54274 439 aa23.58■■□□□ 1.37
COL15A1-205ENST00000610452 A0A1B0GUL7 405 aa23.58■■□□□ 1.37
COL15A1-205ENST00000610452 SLU7O95391 586 aaKnown RBP23.58■■□□□ 1.37
COL15A1-205ENST00000610452 DDX19AQ9NUU7 478 aaKnown RBP23.58■■□□□ 1.37
COL15A1-205ENST00000610452 GOLGA6L9A6NEM1 432 aa23.58■■□□□ 1.36
COL15A1-205ENST00000610452 ZNF526Q8TF50 670 aaPredicted RBP23.58■■□□□ 1.36
COL15A1-205ENST00000610452 CCDC83Q8IWF9 413 aa23.58■■□□□ 1.36
COL15A1-205ENST00000610452 CTAGE5O15320 804 aa23.57■■□□□ 1.36
COL15A1-205ENST00000610452 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.57■■□□□ 1.36
COL15A1-205ENST00000610452 V9GYY5 206 aaPredicted RBP23.57■■□□□ 1.36
COL15A1-205ENST00000610452 TAF4BQ92750 862 aa23.57■■□□□ 1.36
COL15A1-205ENST00000610452 ZNF165P49910 485 aa23.57■■□□□ 1.36
COL15A1-205ENST00000610452 IMMTQ16891 758 aaKnown RBP23.57■■□□□ 1.36
COL15A1-205ENST00000610452 C1orf141Q5JVX7 400 aa23.57■■□□□ 1.36
COL15A1-205ENST00000610452 TMC6Q7Z403 805 aa23.57■■□□□ 1.36
COL15A1-205ENST00000610452 CCDC175P0C221 793 aa23.56■■□□□ 1.36
COL15A1-205ENST00000610452 GGNBP2Q9H3C7 697 aa23.56■■□□□ 1.36
COL15A1-205ENST00000610452 MAP4K4O95819 1239 aaPredicted RBP23.56■■□□□ 1.36
COL15A1-205ENST00000610452 GABPB1Q06547 395 aaPredicted RBP23.56■■□□□ 1.36
COL15A1-205ENST00000610452 PRIM1P49642 420 aaKnown RBP23.55■■□□□ 1.36
COL15A1-205ENST00000610452 FAM177BA6PVY3 158 aa23.55■■□□□ 1.36
COL15A1-205ENST00000610452 CCDC186Q7Z3E2 898 aa23.55■■□□□ 1.36
COL15A1-205ENST00000610452 ANKRD18AQ8IVF6 992 aa23.55■■□□□ 1.36
COL15A1-205ENST00000610452 CASTP20810 708 aaKnown RBP23.55■■□□□ 1.36
COL15A1-205ENST00000610452 AMOTL1Q8IY63 956 aa23.55■■□□□ 1.36
COL15A1-205ENST00000610452 ZSWIM4Q9H7M6 989 aa23.55■■□□□ 1.36
COL15A1-205ENST00000610452 ERICH3Q5RHP9 1530 aa23.55■■□□□ 1.36
COL15A1-205ENST00000610452 EZRP15311 586 aaKnown RBP23.54■■□□□ 1.36
COL15A1-205ENST00000610452 HSPA4P34932 840 aa23.54■■□□□ 1.36
COL15A1-205ENST00000610452 MCM6Q14566 821 aa23.54■■□□□ 1.36
COL15A1-205ENST00000610452 NOL7Q9UMY1 257 aaKnown RBP23.54■■□□□ 1.36
COL15A1-205ENST00000610452 GNG11P61952 73 aa23.54■■□□□ 1.36
COL15A1-205ENST00000610452 TMEM57Q8N5G2 664 aa23.54■■□□□ 1.36
COL15A1-205ENST00000610452 UBE2HP62256 183 aa23.54■■□□□ 1.36
COL15A1-205ENST00000610452 SART3Q15020 963 aaKnown RBP23.53■■□□□ 1.36
COL15A1-205ENST00000610452 GBP6Q6ZN66 633 aa23.53■■□□□ 1.36
COL15A1-205ENST00000610452 EIF5P55010 431 aaKnown RBP23.53■■□□□ 1.36
COL15A1-205ENST00000610452 CCDC150Q8NCX0 1101 aa23.53■■□□□ 1.36
COL15A1-205ENST00000610452 SKILP12757 684 aa23.53■■□□□ 1.36
COL15A1-205ENST00000610452 CCDC113Q9H0I3 377 aa23.52■■□□□ 1.36
COL15A1-205ENST00000610452 HFM1A2PYH4 1435 aa23.52■■□□□ 1.36
COL15A1-205ENST00000610452 CAVIN2O95810 425 aa23.52■■□□□ 1.36
COL15A1-205ENST00000610452 ERC1Q8IUD2 1116 aa23.52■■□□□ 1.36
COL15A1-205ENST00000610452 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.52■■□□□ 1.36
COL15A1-205ENST00000610452 SSR1P43307 286 aaKnown RBP23.51■■□□□ 1.35
COL15A1-205ENST00000610452 CEP57Q86XR8 500 aa23.51■■□□□ 1.35
COL15A1-205ENST00000610452 BCCIPQ9P287 314 aaKnown RBP eCLIP23.51■■□□□ 1.35
COL15A1-205ENST00000610452 PTPRGP23470 1445 aa23.51■■□□□ 1.35
COL15A1-205ENST00000610452 CWC27Q6UX04 472 aaKnown RBP23.51■■□□□ 1.35
COL15A1-205ENST00000610452 IFFO1Q0D2I5 559 aa23.51■■□□□ 1.35
COL15A1-205ENST00000610452 STX1AQ16623 288 aa23.51■■□□□ 1.35
COL15A1-205ENST00000610452 KRBA2Q6ZNG9 492 aa23.51■■□□□ 1.35
COL15A1-205ENST00000610452 CFTRP13569 1480 aa23.51■■□□□ 1.35
COL15A1-205ENST00000610452 SMC1AQ14683 1233 aaKnown RBP23.5■■□□□ 1.35
COL15A1-205ENST00000610452 C8orf34Q49A92 452 aa23.5■■□□□ 1.35
COL15A1-205ENST00000610452 GIMAP6Q6P9H5 292 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms