RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 SOCS7O14512 581 aa20.17■□□□□ 0.82
CSNK2A1-209ENST00000609606 MYBBP1AQ9BQG0 1328 aaKnown RBP20.17■□□□□ 0.82
CSNK2A1-209ENST00000609606 PKD1L3Q7Z443 1732 aa20.16■□□□□ 0.82
CSNK2A1-209ENST00000609606 SHANK3Q9BYB0 1731 aa20.16■□□□□ 0.82
CSNK2A1-209ENST00000609606 TATP17735 454 aaPredicted RBP20.16■□□□□ 0.82
CSNK2A1-209ENST00000609606 KDRP35968 1356 aa20.16■□□□□ 0.82
CSNK2A1-209ENST00000609606 BCL9O00512 1426 aa20.15■□□□□ 0.82
CSNK2A1-209ENST00000609606 FAM196AQ6ZSG2 479 aa20.14■□□□□ 0.81
CSNK2A1-209ENST00000609606 ZCRB1Q8TBF4 217 aaKnown RBP20.14■□□□□ 0.81
CSNK2A1-209ENST00000609606 MARCH10Q8NA82 808 aaPredicted RBP20.13■□□□□ 0.81
CSNK2A1-209ENST00000609606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.13■□□□□ 0.81
CSNK2A1-209ENST00000609606 SBF2Q86WG5 1849 aa20.12■□□□□ 0.81
CSNK2A1-209ENST00000609606 SULT6B1Q6IMI4 303 aa20.12■□□□□ 0.81
CSNK2A1-209ENST00000609606 NUDCQ9Y266 331 aa20.12■□□□□ 0.81
CSNK2A1-209ENST00000609606 FAM182BQ5T319 152 aa20.11■□□□□ 0.81
CSNK2A1-209ENST00000609606 AEBP1Q8IUX7 1158 aa20.11■□□□□ 0.81
CSNK2A1-209ENST00000609606 UPF1Q92900 1129 aaKnown RBP eCLIP20.11■□□□□ 0.81
CSNK2A1-209ENST00000609606 CCDC125Q86Z20 511 aa20.1■□□□□ 0.81
CSNK2A1-209ENST00000609606 PCDH11XQ9BZA7 1347 aa20.09■□□□□ 0.81
CSNK2A1-209ENST00000609606 PCDH11YQ9BZA8 1340 aa20.09■□□□□ 0.81
CSNK2A1-209ENST00000609606 SPG7Q9UQ90 795 aa20.09■□□□□ 0.81
CSNK2A1-209ENST00000609606 U2SURPO15042 1029 aaKnown RBP20.08■□□□□ 0.81
CSNK2A1-209ENST00000609606 KAT6BQ8WYB5 2073 aa20.07■□□□□ 0.8
CSNK2A1-209ENST00000609606 ANP32CO43423 234 aa20.07■□□□□ 0.8
CSNK2A1-209ENST00000609606 DDX54Q8TDD1 881 aaKnown RBP20.07■□□□□ 0.8
CSNK2A1-209ENST00000609606 HMOX1P09601 288 aa20.06■□□□□ 0.8
CSNK2A1-209ENST00000609606 AMOTQ4VCS5 1084 aa20.06■□□□□ 0.8
CSNK2A1-209ENST00000609606 TNS1Q9HBL0 1735 aaKnown RBP20.05■□□□□ 0.8
CSNK2A1-209ENST00000609606 PLEKHO1Q53GL0 409 aaPredicted RBP20.05■□□□□ 0.8
CSNK2A1-209ENST00000609606 NHSQ6T4R5 1651 aa20.04■□□□□ 0.8
CSNK2A1-209ENST00000609606 CYP27B1O15528 508 aa20.04■□□□□ 0.8
CSNK2A1-209ENST00000609606 FCHSD2O94868 740 aa20.03■□□□□ 0.8
CSNK2A1-209ENST00000609606 U2AF1L5P0DN76 240 aaPredicted RBP20.03■□□□□ 0.8
CSNK2A1-209ENST00000609606 U2AF1Q01081 240 aaKnown RBP eCLIP20.03■□□□□ 0.8
CSNK2A1-209ENST00000609606 TRIM37O94972 964 aa20.02■□□□□ 0.8
CSNK2A1-209ENST00000609606 NKX1-1Q15270 411 aaPredicted RBP20.02■□□□□ 0.8
CSNK2A1-209ENST00000609606 RSPH6AQ9H0K4 717 aa20.02■□□□□ 0.8
CSNK2A1-209ENST00000609606 IFNL2Q8IZJ0 200 aa20.01■□□□□ 0.79
CSNK2A1-209ENST00000609606 BCL11BQ9C0K0 894 aaPredicted RBP20.01■□□□□ 0.79
CSNK2A1-209ENST00000609606 DOT1LQ8TEK3 1739 aa20.01■□□□□ 0.79
CSNK2A1-209ENST00000609606 PHKG2P15735 406 aa20■□□□□ 0.79
CSNK2A1-209ENST00000609606 SF3B2Q13435 895 aaKnown RBP20■□□□□ 0.79
CSNK2A1-209ENST00000609606 ZNF530Q6P9A1 599 aaPredicted RBP19.99■□□□□ 0.79
CSNK2A1-209ENST00000609606 HSP90AB1P08238 724 aaKnown RBP19.98■□□□□ 0.79
CSNK2A1-209ENST00000609606 PRKAR2BP31323 418 aa19.98■□□□□ 0.79
CSNK2A1-209ENST00000609606 TOGARAM1Q9Y4F4 1720 aa19.98■□□□□ 0.79
CSNK2A1-209ENST00000609606 ITGB4P16144 1822 aa19.97■□□□□ 0.79
CSNK2A1-209ENST00000609606 RGPD3A6NKT7 1758 aaPredicted RBP19.97■□□□□ 0.79
CSNK2A1-209ENST00000609606 RGPD4Q7Z3J3 1758 aa19.97■□□□□ 0.79
CSNK2A1-209ENST00000609606 BTAF1O14981 1849 aa19.97■□□□□ 0.79
CSNK2A1-209ENST00000609606 BAG6P46379 1132 aa19.96■□□□□ 0.79
CSNK2A1-209ENST00000609606 C1orf141Q5JVX7 400 aa19.96■□□□□ 0.79
CSNK2A1-209ENST00000609606 PNNQ9H307 717 aaKnown RBP19.96■□□□□ 0.79
CSNK2A1-209ENST00000609606 VIRMAQ69YN4 1812 aaKnown RBP19.95■□□□□ 0.78
CSNK2A1-209ENST00000609606 KCNQ2O43526 872 aa19.95■□□□□ 0.78
CSNK2A1-209ENST00000609606 MTHFSDQ2M296 383 aaKnown RBP19.95■□□□□ 0.78
CSNK2A1-209ENST00000609606 AKAP4Q5JQC9 854 aa19.95■□□□□ 0.78
CSNK2A1-209ENST00000609606 GAS2L2Q8NHY3 880 aa19.95■□□□□ 0.78
CSNK2A1-209ENST00000609606 ACSBG1Q96GR2 724 aa19.95■□□□□ 0.78
CSNK2A1-209ENST00000609606 DCAF5Q96JK2 942 aa19.95■□□□□ 0.78
CSNK2A1-209ENST00000609606 SCN11AQ9UI33 1791 aa19.95■□□□□ 0.78
CSNK2A1-209ENST00000609606 PRIM1P49642 420 aaKnown RBP19.94■□□□□ 0.78
CSNK2A1-209ENST00000609606 WDR43Q15061 677 aaKnown RBP eCLIP19.94■□□□□ 0.78
CSNK2A1-209ENST00000609606 APBA3O96018 575 aa19.93■□□□□ 0.78
CSNK2A1-209ENST00000609606 PTF1AQ7RTS3 328 aa19.93■□□□□ 0.78
CSNK2A1-209ENST00000609606 PHACTR3Q96KR7 559 aa19.93■□□□□ 0.78
CSNK2A1-209ENST00000609606 PLEKHF1Q96S99 279 aa19.93■□□□□ 0.78
CSNK2A1-209ENST00000609606 ADAMTS7Q9UKP4 1686 aa19.93■□□□□ 0.78
CSNK2A1-209ENST00000609606 KDM6AO15550 1401 aaPredicted RBP19.93■□□□□ 0.78
CSNK2A1-209ENST00000609606 PLSCR1O15162 318 aa19.92■□□□□ 0.78
CSNK2A1-209ENST00000609606 ERVV-2B6SEH9 535 aa19.91■□□□□ 0.78
CSNK2A1-209ENST00000609606 NEFMP07197 916 aa19.91■□□□□ 0.78
CSNK2A1-209ENST00000609606 CCDC184Q52MB2 194 aa19.91■□□□□ 0.78
CSNK2A1-209ENST00000609606 DEFB132Q7Z7B7 95 aa19.91■□□□□ 0.78
CSNK2A1-209ENST00000609606 SYTL4Q96C24 671 aaPredicted RBP19.9■□□□□ 0.78
CSNK2A1-209ENST00000609606 MAP3K5Q99683 1374 aa19.9■□□□□ 0.78
CSNK2A1-209ENST00000609606 NCBP3Q53F19 620 aaKnown RBP19.89■□□□□ 0.77
CSNK2A1-209ENST00000609606 DLG5Q8TDM6 1919 aa19.89■□□□□ 0.77
CSNK2A1-209ENST00000609606 CAMKK2Q96RR4 588 aa19.89■□□□□ 0.77
CSNK2A1-209ENST00000609606 MRS2Q9HD23 443 aa19.89■□□□□ 0.77
CSNK2A1-209ENST00000609606 ADAMTS8Q9UP79 889 aa19.89■□□□□ 0.77
CSNK2A1-209ENST00000609606 RREB1Q92766 1687 aa19.88■□□□□ 0.77
CSNK2A1-209ENST00000609606 GNAT3A8MTJ3 354 aa19.88■□□□□ 0.77
CSNK2A1-209ENST00000609606 EN1Q05925 392 aaPredicted RBP19.88■□□□□ 0.77
CSNK2A1-209ENST00000609606 DIEXFQ68CQ4 756 aaKnown RBP19.88■□□□□ 0.77
CSNK2A1-209ENST00000609606 MPRIPQ6WCQ1 1025 aa19.88■□□□□ 0.77
CSNK2A1-209ENST00000609606 MAPK8IP3Q9UPT6 1336 aa19.87■□□□□ 0.77
CSNK2A1-209ENST00000609606 TMOD3Q9NYL9 352 aa19.87■□□□□ 0.77
CSNK2A1-209ENST00000609606 LY75O60449 1722 aa19.87■□□□□ 0.77
CSNK2A1-209ENST00000609606 MRC1P22897 1456 aa19.86■□□□□ 0.77
CSNK2A1-209ENST00000609606 RNMTO43148 476 aaKnown RBP19.86■□□□□ 0.77
CSNK2A1-209ENST00000609606 PNISRQ8TF01 805 aaKnown RBP19.86■□□□□ 0.77
CSNK2A1-209ENST00000609606 PIGBQ92521 554 aa19.86■□□□□ 0.77
CSNK2A1-209ENST00000609606 HTATSF1O43719 755 aaKnown RBP19.85■□□□□ 0.77
CSNK2A1-209ENST00000609606 RUNDC1Q96C34 613 aa19.85■□□□□ 0.77
CSNK2A1-209ENST00000609606 CABP4P57796 275 aa19.84■□□□□ 0.77
CSNK2A1-209ENST00000609606 EZH2Q15910 746 aaKnown RBP19.84■□□□□ 0.77
CSNK2A1-209ENST00000609606 NFE2L2Q16236 605 aa19.84■□□□□ 0.77
CSNK2A1-209ENST00000609606 LGR6Q9HBX8 967 aa19.84■□□□□ 0.77
CSNK2A1-209ENST00000609606 CEMIPQ8WUJ3 1361 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms