RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 HS1BP3Q53T59 392 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 LMOD2Q6P5Q4 547 aa5.68□□□□□ -1.5
HDDC2-208ENST00000609021 INO80Q9ULG1 1556 aaPredicted RBP5.67□□□□□ -1.5
HDDC2-208ENST00000609021 PLXNC1O60486 1568 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 U2AF2P26368 475 aaKnown RBP eCLIP5.67□□□□□ -1.51e-6■□□□□ 8.6
HDDC2-208ENST00000609021 PSMD2Q13200 908 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 C16orf87Q6PH81 154 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 TAX1BP1Q86VP1 789 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 KIF2CQ99661 725 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 HIRIP3Q9BW71 556 aaPredicted RBP5.67□□□□□ -1.5
HDDC2-208ENST00000609021 PPME1Q9Y570 386 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 FMN1Q68DA7 1419 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 TPM1P09493 284 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 IRX1P78414 480 aaPredicted RBP5.67□□□□□ -1.5
HDDC2-208ENST00000609021 RAD51AP2Q09MP3 1159 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 ZFYVE27Q5T4F4 411 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 WWC2Q6AWC2 1192 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 FMNL3Q8IVF7 1028 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 NME8Q8N427 588 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 BORCS6Q96GS4 357 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 DIAPH3Q9NSV4 1193 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 RPS6KL1Q9Y6S9 549 aa5.67□□□□□ -1.5
HDDC2-208ENST00000609021 DDX11L8A8MPP1 907 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 NEBLO76041 1014 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 CCDC175P0C221 793 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 TERF2Q15554 542 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 LONRF3Q496Y0 759 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 KCNV2Q8TDN2 545 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 UNC13BO14795 1591 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 NCOA2Q15596 1464 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 E2F4Q16254 413 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 SWT1Q5T5J6 900 aaKnown RBP5.66□□□□□ -1.5
HDDC2-208ENST00000609021 MAF1Q9H063 256 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 USP8P40818 1118 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 C1QTNF12Q5T7M4 302 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 MORC1Q86VD1 984 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 KRT222Q8N1A0 295 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 KDM5DQ9BY66 1539 aa5.66□□□□□ -1.5
HDDC2-208ENST00000609021 GTF2F1P35269 517 aaKnown RBP eCLIP5.65□□□□□ -1.5
HDDC2-208ENST00000609021 HNRNPH2P55795 449 aaKnown RBP5.65□□□□□ -1.5
HDDC2-208ENST00000609021 RBBP5Q15291 538 aaKnown RBP5.65□□□□□ -1.5
HDDC2-208ENST00000609021 ATF5Q9Y2D1 282 aaPredicted RBP5.65□□□□□ -1.5
HDDC2-208ENST00000609021 MAGI2Q86UL8 1455 aa5.65□□□□□ -1.5
HDDC2-208ENST00000609021 ARHGEF12Q9NZN5 1544 aa5.65□□□□□ -1.5
HDDC2-208ENST00000609021 CCDC189A1A4V9 331 aa5.65□□□□□ -1.5
HDDC2-208ENST00000609021 STK10O94804 968 aaKnown RBP5.65□□□□□ -1.5
HDDC2-208ENST00000609021 MCM4P33991 863 aa5.65□□□□□ -1.5
HDDC2-208ENST00000609021 TRAF1Q13077 416 aa5.65□□□□□ -1.5
HDDC2-208ENST00000609021 MCM6Q14566 821 aa5.65□□□□□ -1.5
HDDC2-208ENST00000609021 NEUROD2Q15784 382 aa5.65□□□□□ -1.5
HDDC2-208ENST00000609021 TTC19Q6DKK2 380 aaPredicted RBP5.65□□□□□ -1.5
HDDC2-208ENST00000609021 RNF214Q8ND24 703 aa5.65□□□□□ -1.5
HDDC2-208ENST00000609021 NOL7Q9UMY1 257 aaKnown RBP5.65□□□□□ -1.5
HDDC2-208ENST00000609021 IFT172Q9UG01 1749 aa5.65□□□□□ -1.51
HDDC2-208ENST00000609021 GLI2P10070 1586 aa5.65□□□□□ -1.51
HDDC2-208ENST00000609021 VWDEQ8N2E2 1590 aa5.65□□□□□ -1.51
HDDC2-208ENST00000609021 ADGRL2O95490 1459 aa5.65□□□□□ -1.51
HDDC2-208ENST00000609021 SLFN14P0C7P3 912 aa5.65□□□□□ -1.51
HDDC2-208ENST00000609021 ATP2B1P20020 1258 aa5.65□□□□□ -1.51
HDDC2-208ENST00000609021 INF2Q27J81 1249 aa5.65□□□□□ -1.51
HDDC2-208ENST00000609021 UVSSAQ2YD98 709 aa5.65□□□□□ -1.51
HDDC2-208ENST00000609021 TRIM74Q86UV6 250 aa5.65□□□□□ -1.51
HDDC2-208ENST00000609021 TRIM73Q86UV7 250 aa5.65□□□□□ -1.51
HDDC2-208ENST00000609021 PRPF38AQ8NAV1 312 aaKnown RBP5.65□□□□□ -1.51
HDDC2-208ENST00000609021 ZNF396Q96N95 335 aaPredicted RBP5.65□□□□□ -1.51
HDDC2-208ENST00000609021 IQCGQ9H095 443 aaKnown RBP5.65□□□□□ -1.51
HDDC2-208ENST00000609021 MBD5Q9P267 1494 aa5.64□□□□□ -1.51
HDDC2-208ENST00000609021 KIDINS220Q9ULH0 1771 aa5.64□□□□□ -1.51
HDDC2-208ENST00000609021 ECEL1O95672 775 aa5.64□□□□□ -1.51
HDDC2-208ENST00000609021 NOLC1Q14978 699 aaKnown RBP eCLIP5.64□□□□□ -1.514e-14■■■■□ 23.8
HDDC2-208ENST00000609021 TBC1D22AQ8WUA7 517 aa5.64□□□□□ -1.51
HDDC2-208ENST00000609021 RANBP17Q9H2T7 1088 aaKnown RBP5.64□□□□□ -1.51
HDDC2-208ENST00000609021 ETAA1Q9NY74 926 aa5.64□□□□□ -1.51
HDDC2-208ENST00000609021 BIN2Q9UBW5 565 aaPredicted RBP5.64□□□□□ -1.51
HDDC2-208ENST00000609021 PPFIA2O75334 1257 aa5.64□□□□□ -1.51
HDDC2-208ENST00000609021 SKOR2Q2VWA4 1001 aaPredicted RBP5.64□□□□□ -1.51
HDDC2-208ENST00000609021 NFXL1Q6ZNB6 911 aa5.64□□□□□ -1.51
HDDC2-208ENST00000609021 STK11IPQ8N1F8 1099 aa5.64□□□□□ -1.51
HDDC2-208ENST00000609021 MKL1Q969V6 931 aa5.64□□□□□ -1.51
HDDC2-208ENST00000609021 SPATS2LQ9NUQ6 558 aaKnown RBP5.64□□□□□ -1.51
HDDC2-208ENST00000609021 CCDC39Q9UFE4 941 aa5.64□□□□□ -1.51
HDDC2-208ENST00000609021 POLR1AO95602 1720 aaPredicted RBP5.64□□□□□ -1.51
HDDC2-208ENST00000609021 GPATCH8Q9UKJ3 1502 aaKnown RBP5.64□□□□□ -1.51
HDDC2-208ENST00000609021 SHTN1A0MZ66 631 aa5.64□□□□□ -1.51
HDDC2-208ENST00000609021 TESPA1A2RU30 521 aaPredicted RBP5.64□□□□□ -1.51
HDDC2-208ENST00000609021 U2SURPO15042 1029 aaKnown RBP5.64□□□□□ -1.51
HDDC2-208ENST00000609021 KINO60870 393 aaKnown RBP5.64□□□□□ -1.51
HDDC2-208ENST00000609021 DBN1Q16643 649 aa5.64□□□□□ -1.51
HDDC2-208ENST00000609021 FBXW7Q969H0 707 aa5.64□□□□□ -1.51
HDDC2-208ENST00000609021 PPP1R1BQ9UD71 204 aaPredicted RBP5.64□□□□□ -1.51
HDDC2-208ENST00000609021 CTDP1Q9Y5B0 961 aaPredicted RBP5.64□□□□□ -1.51
HDDC2-208ENST00000609021 ABCC1P33527 1531 aa5.63□□□□□ -1.51
HDDC2-208ENST00000609021 KDM5CP41229 1560 aa5.63□□□□□ -1.51
HDDC2-208ENST00000609021 IPO5O00410 1097 aaKnown RBP5.63□□□□□ -1.51
HDDC2-208ENST00000609021 U2AF1L5P0DN76 240 aaPredicted RBP5.63□□□□□ -1.51
HDDC2-208ENST00000609021 NAT1P18440 290 aa5.63□□□□□ -1.51
HDDC2-208ENST00000609021 MNAT1P51948 309 aa5.63□□□□□ -1.51
HDDC2-208ENST00000609021 U2AF1Q01081 240 aaKnown RBP eCLIP5.63□□□□□ -1.51
HDDC2-208ENST00000609021 RABEP1Q15276 862 aa5.63□□□□□ -1.51
HDDC2-208ENST00000609021 DNAAF4Q8WXU2 420 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms