RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 KLRG1Q96E93 195 aa13.53□□□□□ -0.24
CTCFL-220ENST00000608858 U3KPZ7 1027 aaPredicted RBP13.53□□□□□ -0.24
CTCFL-220ENST00000608858 TTC21BQ7Z4L5 1316 aa13.53□□□□□ -0.24
CTCFL-220ENST00000608858 IGSF1Q8N6C5 1336 aa13.53□□□□□ -0.24
CTCFL-220ENST00000608858 SLIT3O75094 1523 aa13.53□□□□□ -0.24
CTCFL-220ENST00000608858 TUBGCP6Q96RT7 1819 aa13.53□□□□□ -0.24
CTCFL-220ENST00000608858 LTV1Q96GA3 475 aaPredicted RBP13.52□□□□□ -0.25
CTCFL-220ENST00000608858 COL24A1Q17RW2 1714 aa13.52□□□□□ -0.25
CTCFL-220ENST00000608858 ANKRD24Q8TF21 1146 aa13.51□□□□□ -0.25
CTCFL-220ENST00000608858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.5□□□□□ -0.25
CTCFL-220ENST00000608858 PCNTO95613 3336 aa13.49□□□□□ -0.25
CTCFL-220ENST00000608858 SLC4A2P04920 1241 aa13.49□□□□□ -0.25
CTCFL-220ENST00000608858 ARHGAP27Q6ZUM4 889 aa13.49□□□□□ -0.25
CTCFL-220ENST00000608858 JMYQ8N9B5 988 aa13.49□□□□□ -0.25
CTCFL-220ENST00000608858 CENPJQ9HC77 1338 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-220ENST00000608858 PIK3C2AO00443 1686 aa13.48□□□□□ -0.25
CTCFL-220ENST00000608858 C16orf71Q8IYS4 520 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-220ENST00000608858 ERBB3P21860 1342 aa13.47□□□□□ -0.25
CTCFL-220ENST00000608858 PHF14O94880 888 aa13.47□□□□□ -0.25
CTCFL-220ENST00000608858 QSER1Q2KHR3 1735 aa13.47□□□□□ -0.25
CTCFL-220ENST00000608858 ABCC6O95255 1503 aa13.46□□□□□ -0.25
CTCFL-220ENST00000608858 AMIGO3Q86WK7 504 aa13.46□□□□□ -0.25
CTCFL-220ENST00000608858 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.25
CTCFL-220ENST00000608858 TRPM1Q7Z4N2 1603 aa13.46□□□□□ -0.26
CTCFL-220ENST00000608858 STAC3Q96MF2 364 aa13.45□□□□□ -0.26
CTCFL-220ENST00000608858 BCS1LQ9Y276 419 aa13.45□□□□□ -0.26
CTCFL-220ENST00000608858 A0A0G2JLW4 131 aa13.44□□□□□ -0.26
CTCFL-220ENST00000608858 NME9Q86XW9 330 aa13.44□□□□□ -0.26
CTCFL-220ENST00000608858 RBM46Q8TBY0 533 aaKnown RBP13.44□□□□□ -0.26
CTCFL-220ENST00000608858 RRAGCQ9HB90 399 aa13.44□□□□□ -0.26
CTCFL-220ENST00000608858 SLC34A2O95436 690 aa13.43□□□□□ -0.26
CTCFL-220ENST00000608858 HSPA1AP0DMV8 641 aaKnown RBP13.43□□□□□ -0.26
CTCFL-220ENST00000608858 HSPA1BP0DMV9 641 aaKnown RBP13.43□□□□□ -0.26
CTCFL-220ENST00000608858 ANKRD36BQ8N2N9 1353 aa13.43□□□□□ -0.26
CTCFL-220ENST00000608858 USP47Q96K76 1375 aa13.43□□□□□ -0.26
CTCFL-220ENST00000608858 WDR90Q96KV7 1748 aa13.42□□□□□ -0.26
CTCFL-220ENST00000608858 FLAD1Q8NFF5 587 aa13.42□□□□□ -0.26
CTCFL-220ENST00000608858 ZCRB1Q8TBF4 217 aaKnown RBP13.42□□□□□ -0.26
CTCFL-220ENST00000608858 NSD2O96028 1365 aa13.42□□□□□ -0.26
CTCFL-220ENST00000608858 TTC21AQ8NDW8 1320 aa13.41□□□□□ -0.26
CTCFL-220ENST00000608858 FBLN1P23142 703 aa13.41□□□□□ -0.26
CTCFL-220ENST00000608858 KTN1Q86UP2 1357 aaKnown RBP13.41□□□□□ -0.26
CTCFL-220ENST00000608858 NFAT5O94916 1531 aa13.4□□□□□ -0.26
CTCFL-220ENST00000608858 C9orf131Q5VYM1 1079 aa13.4□□□□□ -0.26
CTCFL-220ENST00000608858 MPRIPQ6WCQ1 1025 aa13.4□□□□□ -0.26
CTCFL-220ENST00000608858 AK7Q96M32 723 aa13.4□□□□□ -0.26
CTCFL-220ENST00000608858 EVC2Q86UK5 1308 aa13.39□□□□□ -0.27
CTCFL-220ENST00000608858 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.39□□□□□ -0.27
CTCFL-220ENST00000608858 FSTL1Q12841 308 aa13.39□□□□□ -0.27
CTCFL-220ENST00000608858 LY75O60449 1722 aa13.39□□□□□ -0.27
CTCFL-220ENST00000608858 FCHSD2O94868 740 aa13.38□□□□□ -0.27
CTCFL-220ENST00000608858 USHBP1Q8N6Y0 703 aa13.37□□□□□ -0.27
CTCFL-220ENST00000608858 IP6K1Q92551 441 aa13.37□□□□□ -0.27
CTCFL-220ENST00000608858 DPEP1P16444 411 aa13.36□□□□□ -0.27
CTCFL-220ENST00000608858 TMC1Q8TDI8 760 aa13.36□□□□□ -0.27
CTCFL-220ENST00000608858 DOT1LQ8TEK3 1739 aa13.36□□□□□ -0.27
CTCFL-220ENST00000608858 RAB3GAP2Q9H2M9 1393 aa13.35□□□□□ -0.27
CTCFL-220ENST00000608858 QRICH2Q9H0J4 1663 aa13.35□□□□□ -0.27
CTCFL-220ENST00000608858 MMP10P09238 476 aa13.35□□□□□ -0.27
CTCFL-220ENST00000608858 POTEHQ6S545 545 aa13.35□□□□□ -0.27
CTCFL-220ENST00000608858 KCPQ6ZWJ8 1503 aa13.34□□□□□ -0.27
CTCFL-220ENST00000608858 N4BP2Q86UW6 1770 aaPredicted RBP13.33□□□□□ -0.28
CTCFL-220ENST00000608858 RNF181Q9P0P0 153 aa13.33□□□□□ -0.28
CTCFL-220ENST00000608858 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
CTCFL-220ENST00000608858 LTN1O94822 1766 aa13.32□□□□□ -0.28
CTCFL-220ENST00000608858 TGFB2P61812 414 aa13.32□□□□□ -0.28
CTCFL-220ENST00000608858 SMC1BQ8NDV3 1235 aa13.32□□□□□ -0.28
CTCFL-220ENST00000608858 KDM2BQ8NHM5 1336 aa13.32□□□□□ -0.28
CTCFL-220ENST00000608858 AMPHP49418 695 aa13.31□□□□□ -0.28
CTCFL-220ENST00000608858 NBPF6Q5VWK0 638 aa13.31□□□□□ -0.28
CTCFL-220ENST00000608858 LINC00116Q8NCU8 138 aa13.31□□□□□ -0.28
CTCFL-220ENST00000608858 NBPF4Q96M43 638 aa13.31□□□□□ -0.28
CTCFL-220ENST00000608858 SLC12A5Q9H2X9 1139 aa13.31□□□□□ -0.28
CTCFL-220ENST00000608858 USP31Q70CQ4 1352 aa13.31□□□□□ -0.28
CTCFL-220ENST00000608858 C5P01031 1676 aa13.31□□□□□ -0.28
CTCFL-220ENST00000608858 GNPATO15228 680 aa13.3□□□□□ -0.28
CTCFL-220ENST00000608858 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
CTCFL-220ENST00000608858 PXDNLA1KZ92 1463 aa13.29□□□□□ -0.28
CTCFL-220ENST00000608858 KCNA3P22001 575 aa13.29□□□□□ -0.28
CTCFL-220ENST00000608858 HOXC9P31274 260 aa13.29□□□□□ -0.28
CTCFL-220ENST00000608858 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
CTCFL-220ENST00000608858 PIGBQ92521 554 aa13.29□□□□□ -0.28
CTCFL-220ENST00000608858 MKRN1Q9UHC7 482 aaKnown RBP13.29□□□□□ -0.28
CTCFL-220ENST00000608858 MEGF6O75095 1541 aa13.29□□□□□ -0.28
CTCFL-220ENST00000608858 RGPD2P0DJD1 1756 aa13.28□□□□□ -0.28
CTCFL-220ENST00000608858 SSFA2P28290 1259 aa13.28□□□□□ -0.28
CTCFL-220ENST00000608858 RAPGEF4Q8WZA2 1011 aa13.28□□□□□ -0.28
CTCFL-220ENST00000608858 TAF1LQ8IZX4 1826 aa13.27□□□□□ -0.28
CTCFL-220ENST00000608858 FOXN1O15353 648 aa13.27□□□□□ -0.29
CTCFL-220ENST00000608858 TATP17735 454 aaPredicted RBP13.27□□□□□ -0.29
CTCFL-220ENST00000608858 TMF1P82094 1093 aa13.27□□□□□ -0.29
CTCFL-220ENST00000608858 ITPK1Q13572 414 aa13.27□□□□□ -0.29
CTCFL-220ENST00000608858 HDGFL2Q7Z4V5 671 aaPredicted RBP13.27□□□□□ -0.29
CTCFL-220ENST00000608858 SMARCC1Q92922 1105 aaPredicted RBP13.27□□□□□ -0.29
CTCFL-220ENST00000608858 MAP3K19Q56UN5 1328 aa13.27□□□□□ -0.29
CTCFL-220ENST00000608858 SBNO2Q9Y2G9 1366 aa13.27□□□□□ -0.29
CTCFL-220ENST00000608858 USP54Q70EL1 1684 aa13.27□□□□□ -0.29
CTCFL-220ENST00000608858 C4BP0C0L5 1744 aa13.27□□□□□ -0.29
CTCFL-220ENST00000608858 LOC102724428A0A0B4J2F2 783 aa13.26□□□□□ -0.29
CTCFL-220ENST00000608858 ATP6V1AP38606 617 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms