RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 MEGF6O75095 1541 aa14.67□□□□□ -0.06
CTCFL-214ENST00000608108 TMPOP42166 694 aaKnown RBP14.66□□□□□ -0.06
CTCFL-214ENST00000608108 NFE2L2Q16236 605 aa14.66□□□□□ -0.06
CTCFL-214ENST00000608108 RAPGEF4Q8WZA2 1011 aa14.66□□□□□ -0.06
CTCFL-214ENST00000608108 BCL9LQ86UU0 1499 aa14.66□□□□□ -0.06
CTCFL-214ENST00000608108 FNBP4Q8N3X1 1017 aaPredicted RBP14.66□□□□□ -0.06
CTCFL-214ENST00000608108 NGEFQ8N5V2 710 aa14.66□□□□□ -0.06
CTCFL-214ENST00000608108 USP35Q9P2H5 1018 aa14.66□□□□□ -0.06
CTCFL-214ENST00000608108 PKD1L3Q7Z443 1732 aa14.65□□□□□ -0.06
CTCFL-214ENST00000608108 RIPK4P57078 832 aa14.65□□□□□ -0.06
CTCFL-214ENST00000608108 UNC5CLQ8IV45 518 aa14.65□□□□□ -0.06
CTCFL-214ENST00000608108 TATP17735 454 aaPredicted RBP14.64□□□□□ -0.07
CTCFL-214ENST00000608108 MTHFSDQ2M296 383 aaKnown RBP14.64□□□□□ -0.07
CTCFL-214ENST00000608108 GAS2L2Q8NHY3 880 aa14.64□□□□□ -0.07
CTCFL-214ENST00000608108 PLEKHG2Q9H7P9 1386 aa14.64□□□□□ -0.07
CTCFL-214ENST00000608108 USP21Q9UK80 565 aa14.63□□□□□ -0.07
CTCFL-214ENST00000608108 OVOS2A0A0G2JMS6 1433 aa14.63□□□□□ -0.07
CTCFL-214ENST00000608108 IL2RBP14784 551 aa14.63□□□□□ -0.07
CTCFL-214ENST00000608108 CCDC27Q2M243 656 aa14.63□□□□□ -0.07
CTCFL-214ENST00000608108 AMOTQ4VCS5 1084 aa14.63□□□□□ -0.07
CTCFL-214ENST00000608108 PLEKHO1Q53GL0 409 aaPredicted RBP14.63□□□□□ -0.07
CTCFL-214ENST00000608108 VIRMAQ69YN4 1812 aaKnown RBP14.62□□□□□ -0.07
CTCFL-214ENST00000608108 AFF2P51816 1311 aa14.62□□□□□ -0.07
CTCFL-214ENST00000608108 SPATA31A1Q5TZJ5 1347 aa14.62□□□□□ -0.07
CTCFL-214ENST00000608108 WWC1Q8IX03 1113 aa14.62□□□□□ -0.07
CTCFL-214ENST00000608108 CCDC9Q9Y3X0 531 aaKnown RBP14.62□□□□□ -0.07
CTCFL-214ENST00000608108 SPATA31A5Q5VU36 1347 aa14.62□□□□□ -0.07
CTCFL-214ENST00000608108 SPATA31A7Q8IWB4 1347 aa14.62□□□□□ -0.07
CTCFL-214ENST00000608108 ZNF521Q96K83 1311 aa14.62□□□□□ -0.07
CTCFL-214ENST00000608108 LMOD3Q0VAK6 560 aa14.61□□□□□ -0.07
CTCFL-214ENST00000608108 VPS72Q15906 364 aa14.61□□□□□ -0.07
CTCFL-214ENST00000608108 TRIM35Q9UPQ4 493 aa14.61□□□□□ -0.07
CTCFL-214ENST00000608108 SHANK3Q9BYB0 1731 aa14.61□□□□□ -0.07
CTCFL-214ENST00000608108 DISP2A7MBM2 1401 aa14.6□□□□□ -0.07
CTCFL-214ENST00000608108 MAP3K5Q99683 1374 aa14.6□□□□□ -0.07
CTCFL-214ENST00000608108 ZNF530Q6P9A1 599 aaPredicted RBP14.6□□□□□ -0.07
CTCFL-214ENST00000608108 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.59□□□□□ -0.07
CTCFL-214ENST00000608108 SPG7Q9UQ90 795 aa14.59□□□□□ -0.07
CTCFL-214ENST00000608108 THRAP3Q9Y2W1 955 aaKnown RBP14.59□□□□□ -0.07
CTCFL-214ENST00000608108 GNAT3A8MTJ3 354 aa14.58□□□□□ -0.08
CTCFL-214ENST00000608108 CENPBP07199 599 aaPredicted RBP14.58□□□□□ -0.08
CTCFL-214ENST00000608108 PDE3BQ13370 1112 aa14.58□□□□□ -0.08
CTCFL-214ENST00000608108 C1orf141Q5JVX7 400 aa14.58□□□□□ -0.08
CTCFL-214ENST00000608108 RTF1Q92541 710 aaKnown RBP14.58□□□□□ -0.08
CTCFL-214ENST00000608108 ATRNO75882 1429 aa14.57□□□□□ -0.08
CTCFL-214ENST00000608108 LRRC37A3O60309 1634 aa14.57□□□□□ -0.08
CTCFL-214ENST00000608108 KCNA4P22459 653 aa14.57□□□□□ -0.08
CTCFL-214ENST00000608108 GOLGA2Q08379 1002 aa14.57□□□□□ -0.08
CTCFL-214ENST00000608108 AKAP4Q5JQC9 854 aa14.57□□□□□ -0.08
CTCFL-214ENST00000608108 WDR63Q8IWG1 891 aa14.57□□□□□ -0.08
CTCFL-214ENST00000608108 CDCA7Q9BWT1 371 aaPredicted RBP14.57□□□□□ -0.08
CTCFL-214ENST00000608108 GLI3P10071 1580 aa14.56□□□□□ -0.08
CTCFL-214ENST00000608108 PCDH11XQ9BZA7 1347 aa14.56□□□□□ -0.08
CTCFL-214ENST00000608108 PCDH11YQ9BZA8 1340 aa14.56□□□□□ -0.08
CTCFL-214ENST00000608108 DCTN1Q14203 1278 aa14.56□□□□□ -0.08
CTCFL-214ENST00000608108 BARGINQ6ZT62 677 aa14.56□□□□□ -0.08
CTCFL-214ENST00000608108 MCM10Q7L590 875 aa14.56□□□□□ -0.08
CTCFL-214ENST00000608108 ZCRB1Q8TBF4 217 aaKnown RBP14.56□□□□□ -0.08
CTCFL-214ENST00000608108 CDCA7LQ96GN5 454 aa14.56□□□□□ -0.08
CTCFL-214ENST00000608108 THUMPD2Q9BTF0 503 aaKnown RBP14.56□□□□□ -0.08
CTCFL-214ENST00000608108 TRPC5Q9UL62 973 aaPredicted RBP14.56□□□□□ -0.08
CTCFL-214ENST00000608108 SCN11AQ9UI33 1791 aa14.56□□□□□ -0.08
CTCFL-214ENST00000608108 HTATSF1O43719 755 aaKnown RBP14.55□□□□□ -0.08
CTCFL-214ENST00000608108 TNS2Q63HR2 1409 aa14.55□□□□□ -0.08
CTCFL-214ENST00000608108 ADAMTS7Q9UKP4 1686 aa14.55□□□□□ -0.08
CTCFL-214ENST00000608108 CYP27B1O15528 508 aa14.55□□□□□ -0.08
CTCFL-214ENST00000608108 PHKG2P15735 406 aa14.55□□□□□ -0.08
CTCFL-214ENST00000608108 CALD1Q05682 793 aaKnown RBP14.55□□□□□ -0.08
CTCFL-214ENST00000608108 IFNL2Q8IZJ0 200 aa14.55□□□□□ -0.08
CTCFL-214ENST00000608108 FAM98CQ17RN3 349 aaKnown RBP14.54□□□□□ -0.08
CTCFL-214ENST00000608108 GJD4Q96KN9 370 aaPredicted RBP14.54□□□□□ -0.08
CTCFL-214ENST00000608108 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
CTCFL-214ENST00000608108 THSD7AQ9UPZ6 1657 aa14.54□□□□□ -0.08
CTCFL-214ENST00000608108 IL16Q14005 1332 aa14.53□□□□□ -0.08
CTCFL-214ENST00000608108 E9PSI1 815 aa14.53□□□□□ -0.08
CTCFL-214ENST00000608108 MPRIPQ6WCQ1 1025 aa14.53□□□□□ -0.08
CTCFL-214ENST00000608108 EXOC5O00471 708 aa14.52□□□□□ -0.08
CTCFL-214ENST00000608108 SLFN5Q08AF3 891 aa14.52□□□□□ -0.08
CTCFL-214ENST00000608108 ZNF772Q68DY9 489 aaPredicted RBP14.52□□□□□ -0.08
CTCFL-214ENST00000608108 IL17REQ8NFR9 667 aa14.52□□□□□ -0.08
CTCFL-214ENST00000608108 QTRT2Q9H974 415 aaKnown RBP14.52□□□□□ -0.08
CTCFL-214ENST00000608108 CEMIPQ8WUJ3 1361 aa14.52□□□□□ -0.08
CTCFL-214ENST00000608108 KDM6AO15550 1401 aaPredicted RBP14.52□□□□□ -0.09
CTCFL-214ENST00000608108 KAT6BQ8WYB5 2073 aa14.52□□□□□ -0.09
CTCFL-214ENST00000608108 HSP90AB1P08238 724 aaKnown RBP14.52□□□□□ -0.09
CTCFL-214ENST00000608108 DDB1Q16531 1140 aa14.52□□□□□ -0.09
CTCFL-214ENST00000608108 DDX54Q8TDD1 881 aaKnown RBP14.52□□□□□ -0.09
CTCFL-214ENST00000608108 SIPA1L3O60292 1781 aaPredicted RBP14.51□□□□□ -0.09
CTCFL-214ENST00000608108 A0A0G2JS52 829 aa14.51□□□□□ -0.09
CTCFL-214ENST00000608108 MYT1Q01538 1121 aa14.51□□□□□ -0.09
CTCFL-214ENST00000608108 MYH16Q9H6N6 1097 aa14.51□□□□□ -0.09
CTCFL-214ENST00000608108 LGR6Q9HBX8 967 aa14.51□□□□□ -0.09
CTCFL-214ENST00000608108 IFT57Q9NWB7 429 aa14.51□□□□□ -0.09
CTCFL-214ENST00000608108 LAS1LQ9Y4W2 734 aaKnown RBP14.51□□□□□ -0.09
CTCFL-214ENST00000608108 RNMTO43148 476 aaKnown RBP14.5□□□□□ -0.09
CTCFL-214ENST00000608108 DUSP27Q5VZP5 1158 aa14.5□□□□□ -0.09
CTCFL-214ENST00000608108 DCAF5Q96JK2 942 aa14.5□□□□□ -0.09
CTCFL-214ENST00000608108 U3KPZ7 1027 aaPredicted RBP14.5□□□□□ -0.09
CTCFL-214ENST00000608108 TOGARAM1Q9Y4F4 1720 aa14.5□□□□□ -0.09
CTCFL-214ENST00000608108 GNAI1P63096 354 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms