RNA–Protein interactions for RNA: ENST00000606538.5

POLR2F-213, Transcript of RNA polymerase II subunit F, humanhuman

TSL 2 BASIC

Gene POLR2F, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-213ENST00000606538 USHBP1Q8N6Y0 703 aa17.81■□□□□ 0.44
POLR2F-213ENST00000606538 IGSF1Q8N6C5 1336 aa17.8■□□□□ 0.44
POLR2F-213ENST00000606538 ILDR2Q71H61 639 aa17.8■□□□□ 0.44
POLR2F-213ENST00000606538 LRRC37A3O60309 1634 aa17.8■□□□□ 0.44
POLR2F-213ENST00000606538 DIAPH1O60610 1272 aaKnown RBP17.79■□□□□ 0.44
POLR2F-213ENST00000606538 SEPT12Q8IYM1 358 aa17.79■□□□□ 0.44
POLR2F-213ENST00000606538 MEGF6O75095 1541 aa17.77■□□□□ 0.44
POLR2F-213ENST00000606538 ANP32CO43423 234 aa17.77■□□□□ 0.44
POLR2F-213ENST00000606538 CFAP53Q96M91 514 aa17.77■□□□□ 0.44
POLR2F-213ENST00000606538 SHANK3Q9BYB0 1731 aa17.77■□□□□ 0.44
POLR2F-213ENST00000606538 IL2RBP14784 551 aa17.76■□□□□ 0.43
POLR2F-213ENST00000606538 KDRP35968 1356 aa17.76■□□□□ 0.43
POLR2F-213ENST00000606538 AEBP1Q8IUX7 1158 aa17.75■□□□□ 0.43
POLR2F-213ENST00000606538 CDCA7Q9BWT1 371 aaPredicted RBP17.75■□□□□ 0.43
POLR2F-213ENST00000606538 CCDC184Q52MB2 194 aa17.74■□□□□ 0.43
POLR2F-213ENST00000606538 PKD1L3Q7Z443 1732 aa17.74■□□□□ 0.43
POLR2F-213ENST00000606538 OVOS2A0A0G2JMS6 1433 aa17.73■□□□□ 0.43
POLR2F-213ENST00000606538 SULT6B1Q6IMI4 303 aa17.73■□□□□ 0.43
POLR2F-213ENST00000606538 EP400Q96L91 3159 aa17.72■□□□□ 0.43
POLR2F-213ENST00000606538 TNS2Q63HR2 1409 aa17.72■□□□□ 0.43
POLR2F-213ENST00000606538 A0A0G2JS52 829 aa17.71■□□□□ 0.43
POLR2F-213ENST00000606538 U2SURPO15042 1029 aaKnown RBP17.71■□□□□ 0.43
POLR2F-213ENST00000606538 HMOX1P09601 288 aa17.71■□□□□ 0.43
POLR2F-213ENST00000606538 MYT1Q01538 1121 aa17.71■□□□□ 0.43
POLR2F-213ENST00000606538 DDB1Q16531 1140 aa17.71■□□□□ 0.43
POLR2F-213ENST00000606538 DIEXFQ68CQ4 756 aaKnown RBP17.71■□□□□ 0.43
POLR2F-213ENST00000606538 RAPGEF4Q8WZA2 1011 aa17.71■□□□□ 0.43
POLR2F-213ENST00000606538 KRT27Q7Z3Y8 459 aa17.7■□□□□ 0.42
POLR2F-213ENST00000606538 EXOC5O00471 708 aa17.69■□□□□ 0.42
POLR2F-213ENST00000606538 TATP17735 454 aaPredicted RBP17.69■□□□□ 0.42
POLR2F-213ENST00000606538 NUDCQ9Y266 331 aa17.69■□□□□ 0.42
POLR2F-213ENST00000606538 MARCH10Q8NA82 808 aaPredicted RBP17.68■□□□□ 0.42
POLR2F-213ENST00000606538 RSPH6AQ9H0K4 717 aa17.68■□□□□ 0.42
POLR2F-213ENST00000606538 PLEKHG2Q9H7P9 1386 aa17.67■□□□□ 0.42
POLR2F-213ENST00000606538 U2AF1L5P0DN76 240 aaPredicted RBP17.67■□□□□ 0.42
POLR2F-213ENST00000606538 U2AF1Q01081 240 aaKnown RBP eCLIP17.67■□□□□ 0.42
POLR2F-213ENST00000606538 FAM182BQ5T319 152 aa17.67■□□□□ 0.42
POLR2F-213ENST00000606538 ZCRB1Q8TBF4 217 aaKnown RBP17.67■□□□□ 0.42
POLR2F-213ENST00000606538 SBF2Q86WG5 1849 aa17.66■□□□□ 0.42
POLR2F-213ENST00000606538 PDE3BQ13370 1112 aa17.66■□□□□ 0.42
POLR2F-213ENST00000606538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.66■□□□□ 0.42
POLR2F-213ENST00000606538 CYP27B1O15528 508 aa17.64■□□□□ 0.41
POLR2F-213ENST00000606538 FCHSD2O94868 740 aa17.64■□□□□ 0.41
POLR2F-213ENST00000606538 DDX54Q8TDD1 881 aaKnown RBP17.63■□□□□ 0.41
POLR2F-213ENST00000606538 PLEKHF1Q96S99 279 aa17.63■□□□□ 0.41
POLR2F-213ENST00000606538 BCL9O00512 1426 aa17.63■□□□□ 0.41
POLR2F-213ENST00000606538 PRKAR2BP31323 418 aa17.62■□□□□ 0.41
POLR2F-213ENST00000606538 PNISRQ8TF01 805 aaKnown RBP17.62■□□□□ 0.41
POLR2F-213ENST00000606538 PHACTR3Q96KR7 559 aa17.62■□□□□ 0.41
POLR2F-213ENST00000606538 MRS2Q9HD23 443 aa17.62■□□□□ 0.41
POLR2F-213ENST00000606538 SPG7Q9UQ90 795 aa17.62■□□□□ 0.41
POLR2F-213ENST00000606538 VIRMAQ69YN4 1812 aaKnown RBP17.61■□□□□ 0.41
POLR2F-213ENST00000606538 AMOTQ4VCS5 1084 aa17.61■□□□□ 0.41
POLR2F-213ENST00000606538 PLEKHO1Q53GL0 409 aaPredicted RBP17.61■□□□□ 0.41
POLR2F-213ENST00000606538 MIER1Q8N108 512 aa17.61■□□□□ 0.41
POLR2F-213ENST00000606538 ADAMTS8Q9UP79 889 aa17.61■□□□□ 0.41
POLR2F-213ENST00000606538 PCDH11XQ9BZA7 1347 aa17.61■□□□□ 0.41
POLR2F-213ENST00000606538 PCDH11YQ9BZA8 1340 aa17.61■□□□□ 0.41
POLR2F-213ENST00000606538 TOGARAM1Q9Y4F4 1720 aa17.61■□□□□ 0.41
POLR2F-213ENST00000606538 ZBTB22O15209 634 aa17.6■□□□□ 0.41
POLR2F-213ENST00000606538 ABCB7O75027 752 aa17.6■□□□□ 0.41
POLR2F-213ENST00000606538 PHKG2P15735 406 aa17.6■□□□□ 0.41
POLR2F-213ENST00000606538 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
POLR2F-213ENST00000606538 DOT1LQ8TEK3 1739 aa17.6■□□□□ 0.41
POLR2F-213ENST00000606538 NKX1-1Q15270 411 aaPredicted RBP17.59■□□□□ 0.41
POLR2F-213ENST00000606538 FAM196AQ6ZSG2 479 aa17.59■□□□□ 0.41
POLR2F-213ENST00000606538 DLG5Q8TDM6 1919 aa17.59■□□□□ 0.41
POLR2F-213ENST00000606538 WDR43Q15061 677 aaKnown RBP eCLIP17.58■□□□□ 0.4
POLR2F-213ENST00000606538 ZNF530Q6P9A1 599 aaPredicted RBP17.58■□□□□ 0.4
POLR2F-213ENST00000606538 TNS1Q9HBL0 1735 aaKnown RBP17.58■□□□□ 0.4
POLR2F-213ENST00000606538 NHSQ6T4R5 1651 aa17.58■□□□□ 0.4
POLR2F-213ENST00000606538 ITGB4P16144 1822 aa17.57■□□□□ 0.4
POLR2F-213ENST00000606538 IFNL2Q8IZJ0 200 aa17.57■□□□□ 0.4
POLR2F-213ENST00000606538 SCN11AQ9UI33 1791 aa17.57■□□□□ 0.4
POLR2F-213ENST00000606538 ADAMTS7Q9UKP4 1686 aa17.57■□□□□ 0.4
POLR2F-213ENST00000606538 CCER2I3L3R5 266 aa17.56■□□□□ 0.4
POLR2F-213ENST00000606538 PTF1AQ7RTS3 328 aa17.56■□□□□ 0.4
POLR2F-213ENST00000606538 KAT6BQ8WYB5 2073 aa17.56■□□□□ 0.4
POLR2F-213ENST00000606538 KDM6AO15550 1401 aaPredicted RBP17.55■□□□□ 0.4
POLR2F-213ENST00000606538 CCDC146Q8IYE0 955 aa17.55■□□□□ 0.4
POLR2F-213ENST00000606538 KCNQ2O43526 872 aa17.54■□□□□ 0.4
POLR2F-213ENST00000606538 AKAP4Q5JQC9 854 aa17.54■□□□□ 0.4
POLR2F-213ENST00000606538 UPF1Q92900 1129 aaKnown RBP eCLIP17.54■□□□□ 0.4
POLR2F-213ENST00000606538 TRIM37O94972 964 aa17.53■□□□□ 0.4
POLR2F-213ENST00000606538 GAS2L2Q8NHY3 880 aa17.53■□□□□ 0.4
POLR2F-213ENST00000606538 ACSBG1Q96GR2 724 aa17.53■□□□□ 0.4
POLR2F-213ENST00000606538 PNNQ9H307 717 aaKnown RBP17.53■□□□□ 0.4
POLR2F-213ENST00000606538 BTAF1O14981 1849 aa17.53■□□□□ 0.4
POLR2F-213ENST00000606538 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
POLR2F-213ENST00000606538 RUNDC1Q96C34 613 aa17.52■□□□□ 0.4
POLR2F-213ENST00000606538 PRIM1P49642 420 aaKnown RBP17.51■□□□□ 0.39
POLR2F-213ENST00000606538 MPRIPQ6WCQ1 1025 aa17.51■□□□□ 0.39
POLR2F-213ENST00000606538 DCAF5Q96JK2 942 aa17.51■□□□□ 0.39
POLR2F-213ENST00000606538 LGR6Q9HBX8 967 aa17.51■□□□□ 0.39
POLR2F-213ENST00000606538 MAP3K5Q99683 1374 aa17.51■□□□□ 0.39
POLR2F-213ENST00000606538 HSP90AB1P08238 724 aaKnown RBP17.5■□□□□ 0.39
POLR2F-213ENST00000606538 NFE2L2Q16236 605 aa17.5■□□□□ 0.39
POLR2F-213ENST00000606538 BCL11BQ9C0K0 894 aaPredicted RBP17.5■□□□□ 0.39
POLR2F-213ENST00000606538 SIPA1L3O60292 1781 aaPredicted RBP17.5■□□□□ 0.39
POLR2F-213ENST00000606538 MAPK8IP3Q9UPT6 1336 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms