RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 GJD4Q96KN9 370 aaPredicted RBP10.24□□□□□ -0.77
MSH6-211ENST00000606499 PRKAR2BP31323 418 aa10.23□□□□□ -0.77
MSH6-211ENST00000606499 POTEAQ6S8J7 498 aa10.23□□□□□ -0.77
MSH6-211ENST00000606499 CCDC146Q8IYE0 955 aa10.23□□□□□ -0.77
MSH6-211ENST00000606499 RAPGEF4Q8WZA2 1011 aa10.23□□□□□ -0.77
MSH6-211ENST00000606499 TNS2Q63HR2 1409 aa10.23□□□□□ -0.77
MSH6-211ENST00000606499 TOGARAM1Q9Y4F4 1720 aa10.22□□□□□ -0.77
MSH6-211ENST00000606499 IL2RBP14784 551 aa10.22□□□□□ -0.77
MSH6-211ENST00000606499 THRAP3Q9Y2W1 955 aaKnown RBP10.22□□□□□ -0.77
MSH6-211ENST00000606499 RGS12O14924 1447 aa10.22□□□□□ -0.77
MSH6-211ENST00000606499 DOT1LQ8TEK3 1739 aa10.21□□□□□ -0.77
MSH6-211ENST00000606499 SENP3-EIF4A1A0A087X0R7 540 aa10.21□□□□□ -0.77
MSH6-211ENST00000606499 A0A0G2JS52 829 aa10.21□□□□□ -0.77
MSH6-211ENST00000606499 FCHSD2O94868 740 aa10.21□□□□□ -0.77
MSH6-211ENST00000606499 TATP17735 454 aaPredicted RBP10.21□□□□□ -0.77
MSH6-211ENST00000606499 MYT1Q01538 1121 aa10.21□□□□□ -0.77
MSH6-211ENST00000606499 BARGINQ6ZT62 677 aa10.21□□□□□ -0.77
MSH6-211ENST00000606499 PHACTR3Q96KR7 559 aa10.21□□□□□ -0.77
MSH6-211ENST00000606499 PLEKHF1Q96S99 279 aa10.21□□□□□ -0.77
MSH6-211ENST00000606499 RBM6P78332 1123 aaKnown RBP10.2□□□□□ -0.78
MSH6-211ENST00000606499 PLEKHG2Q9H7P9 1386 aa10.2□□□□□ -0.78
MSH6-211ENST00000606499 SCN11AQ9UI33 1791 aa10.2□□□□□ -0.78
MSH6-211ENST00000606499 ADAMTS7Q9UKP4 1686 aa10.2□□□□□ -0.78
MSH6-211ENST00000606499 MAPK8IP3Q9UPT6 1336 aa10.2□□□□□ -0.78
MSH6-211ENST00000606499 RUNDC1Q96C34 613 aa10.19□□□□□ -0.78
MSH6-211ENST00000606499 ONECUT3O60422 494 aaPredicted RBP10.18□□□□□ -0.78
MSH6-211ENST00000606499 RXRBP28702 533 aa10.18□□□□□ -0.78
MSH6-211ENST00000606499 MTHFSDQ2M296 383 aaKnown RBP10.18□□□□□ -0.78
MSH6-211ENST00000606499 SEPT12Q8IYM1 358 aa10.18□□□□□ -0.78
MSH6-211ENST00000606499 CDCA7Q9BWT1 371 aaPredicted RBP10.18□□□□□ -0.78
MSH6-211ENST00000606499 SIPA1L3O60292 1781 aaPredicted RBP10.17□□□□□ -0.78
MSH6-211ENST00000606499 PCDH11XQ9BZA7 1347 aa10.17□□□□□ -0.78
MSH6-211ENST00000606499 PCDH11YQ9BZA8 1340 aa10.17□□□□□ -0.78
MSH6-211ENST00000606499 CYP27B1O15528 508 aa10.17□□□□□ -0.78
MSH6-211ENST00000606499 DDB1Q16531 1140 aa10.17□□□□□ -0.78
MSH6-211ENST00000606499 PLEKHO1Q53GL0 409 aaPredicted RBP10.17□□□□□ -0.78
MSH6-211ENST00000606499 ZNF530Q6P9A1 599 aaPredicted RBP10.17□□□□□ -0.78
MSH6-211ENST00000606499 ZCRB1Q8TBF4 217 aaKnown RBP10.17□□□□□ -0.78
MSH6-211ENST00000606499 PNNQ9H307 717 aaKnown RBP10.17□□□□□ -0.78
MSH6-211ENST00000606499 SPG7Q9UQ90 795 aa10.17□□□□□ -0.78
MSH6-211ENST00000606499 RRP7AQ9Y3A4 280 aaKnown RBP10.17□□□□□ -0.78
MSH6-211ENST00000606499 ITGB4P16144 1822 aa10.17□□□□□ -0.78
MSH6-211ENST00000606499 SBF2Q86WG5 1849 aa10.17□□□□□ -0.78
MSH6-211ENST00000606499 MAP3K5Q99683 1374 aa10.16□□□□□ -0.78
MSH6-211ENST00000606499 NHSQ6T4R5 1651 aa10.16□□□□□ -0.78
MSH6-211ENST00000606499 EXOC5O00471 708 aa10.16□□□□□ -0.78
MSH6-211ENST00000606499 APAF1O14727 1248 aa10.16□□□□□ -0.78
MSH6-211ENST00000606499 NEFMP07197 916 aa10.16□□□□□ -0.78
MSH6-211ENST00000606499 NFE2L2Q16236 605 aa10.16□□□□□ -0.78
MSH6-211ENST00000606499 AMOTQ4VCS5 1084 aa10.16□□□□□ -0.78
MSH6-211ENST00000606499 DDX54Q8TDD1 881 aaKnown RBP10.16□□□□□ -0.78
MSH6-211ENST00000606499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.16□□□□□ -0.782e-7■■■■■ 45.4
MSH6-211ENST00000606499 KDM6AO15550 1401 aaPredicted RBP10.16□□□□□ -0.78
MSH6-211ENST00000606499 PHKG2P15735 406 aa10.15□□□□□ -0.78
MSH6-211ENST00000606499 TMPOP42166 694 aaKnown RBP10.15□□□□□ -0.78
MSH6-211ENST00000606499 NEUROD2Q15784 382 aa10.15□□□□□ -0.78
MSH6-211ENST00000606499 FAM182BQ5T319 152 aa10.15□□□□□ -0.78
MSH6-211ENST00000606499 MARCH10Q8NA82 808 aaPredicted RBP10.15□□□□□ -0.78
MSH6-211ENST00000606499 GAS2L2Q8NHY3 880 aa10.15□□□□□ -0.78
MSH6-211ENST00000606499 AKAP4Q5JQC9 854 aa10.14□□□□□ -0.79
MSH6-211ENST00000606499 C1orf141Q5JVX7 400 aa10.14□□□□□ -0.79
MSH6-211ENST00000606499 MRC1P22897 1456 aa10.14□□□□□ -0.79
MSH6-211ENST00000606499 PAPPAQ13219 1627 aa10.14□□□□□ -0.79
MSH6-211ENST00000606499 TNS1Q9HBL0 1735 aaKnown RBP10.13□□□□□ -0.79
MSH6-211ENST00000606499 RIPK4P57078 832 aa10.13□□□□□ -0.79
MSH6-211ENST00000606499 PDE3BQ13370 1112 aa10.13□□□□□ -0.79
MSH6-211ENST00000606499 IFNL2Q8IZJ0 200 aa10.13□□□□□ -0.79
MSH6-211ENST00000606499 SALL2Q9Y467 1007 aaPredicted RBP10.13□□□□□ -0.79
MSH6-211ENST00000606499 BTAF1O14981 1849 aa10.12□□□□□ -0.79
MSH6-211ENST00000606499 KDM3BQ7LBC6 1761 aa10.12□□□□□ -0.79
MSH6-211ENST00000606499 GNAT3A8MTJ3 354 aa10.12□□□□□ -0.79
MSH6-211ENST00000606499 HNRNPUQ00839 825 aaKnown RBP eCLIP10.12□□□□□ -0.791e-6■□□□□ 11
MSH6-211ENST00000606499 DCTN1Q14203 1278 aa10.12□□□□□ -0.79
MSH6-211ENST00000606499 MPRIPQ6WCQ1 1025 aa10.12□□□□□ -0.79
MSH6-211ENST00000606499 MCM10Q7L590 875 aa10.12□□□□□ -0.79
MSH6-211ENST00000606499 KRT27Q7Z3Y8 459 aa10.12□□□□□ -0.79
MSH6-211ENST00000606499 THUMPD2Q9BTF0 503 aaKnown RBP10.12□□□□□ -0.79
MSH6-211ENST00000606499 TRIM35Q9UPQ4 493 aa10.12□□□□□ -0.79
MSH6-211ENST00000606499 NKX1-1Q15270 411 aaPredicted RBP10.11□□□□□ -0.79
MSH6-211ENST00000606499 YTHDC1Q96MU7 727 aaKnown RBP10.11□□□□□ -0.79
MSH6-211ENST00000606499 LGR6Q9HBX8 967 aa10.11□□□□□ -0.79
MSH6-211ENST00000606499 CEMIPQ8WUJ3 1361 aa10.11□□□□□ -0.79
MSH6-211ENST00000606499 UBR2Q8IWV8 1755 aa10.11□□□□□ -0.79
MSH6-211ENST00000606499 IL17REQ8NFR9 667 aa10.1□□□□□ -0.79
MSH6-211ENST00000606499 RTF1Q92541 710 aaKnown RBP10.1□□□□□ -0.79
MSH6-211ENST00000606499 DCAF5Q96JK2 942 aa10.1□□□□□ -0.79
MSH6-211ENST00000606499 BCL9O00512 1426 aa10.09□□□□□ -0.79
MSH6-211ENST00000606499 RNMTO43148 476 aaKnown RBP10.09□□□□□ -0.79
MSH6-211ENST00000606499 HSP90AB1P08238 724 aaKnown RBP10.09□□□□□ -0.79
MSH6-211ENST00000606499 LMOD3Q0VAK6 560 aa10.09□□□□□ -0.79
MSH6-211ENST00000606499 ACSBG1Q96GR2 724 aa10.09□□□□□ -0.79
MSH6-211ENST00000606499 HTATSF1O43719 755 aaKnown RBP10.08□□□□□ -0.8
MSH6-211ENST00000606499 CCDC27Q2M243 656 aa10.08□□□□□ -0.8
MSH6-211ENST00000606499 WWC1Q8IX03 1113 aa10.08□□□□□ -0.8
MSH6-211ENST00000606499 C5P01031 1676 aa10.08□□□□□ -0.8
MSH6-211ENST00000606499 ZNF521Q96K83 1311 aa10.07□□□□□ -0.8
MSH6-211ENST00000606499 KCNQ2O43526 872 aa10.07□□□□□ -0.8
MSH6-211ENST00000606499 PRIM1P49642 420 aaKnown RBP10.07□□□□□ -0.8
MSH6-211ENST00000606499 TEFQ10587 303 aa10.07□□□□□ -0.8
MSH6-211ENST00000606499 PTF1AQ7RTS3 328 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms