RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 SYTL4Q96C24 671 aaPredicted RBP32.4■■■□□ 2.78
GTPBP3-227ENST00000602056 KCNQ4P56696 695 aa32.39■■■□□ 2.78
GTPBP3-227ENST00000602056 INSRP06213 1382 aa32.39■■■□□ 2.78
GTPBP3-227ENST00000602056 MYOM1P52179 1685 aa32.39■■■□□ 2.78
GTPBP3-227ENST00000602056 RGPD2P0DJD1 1756 aa32.39■■■□□ 2.78
GTPBP3-227ENST00000602056 NSD3Q9BZ95 1437 aa32.38■■■□□ 2.77
GTPBP3-227ENST00000602056 SLC27A3Q5K4L6 730 aa32.38■■■□□ 2.77
GTPBP3-227ENST00000602056 PCGF6Q9BYE7 350 aa32.38■■■□□ 2.77
GTPBP3-227ENST00000602056 FLT4P35916 1363 aa32.36■■■□□ 2.77
GTPBP3-227ENST00000602056 YY1P25490 414 aa32.36■■■□□ 2.77
GTPBP3-227ENST00000602056 FHDC1Q9C0D6 1143 aaPredicted RBP32.36■■■□□ 2.77
GTPBP3-227ENST00000602056 SHANK3Q9BYB0 1731 aa32.35■■■□□ 2.77
GTPBP3-227ENST00000602056 CLSPNQ9HAW4 1339 aa32.35■■■□□ 2.77
GTPBP3-227ENST00000602056 EMILIN1Q9Y6C2 1016 aa32.35■■■□□ 2.77
GTPBP3-227ENST00000602056 SMG6Q86US8 1419 aaKnown RBP32.34■■■□□ 2.77
GTPBP3-227ENST00000602056 CGNL1Q0VF96 1302 aa32.34■■■□□ 2.77
GTPBP3-227ENST00000602056 RAPGEF4Q8WZA2 1011 aa32.34■■■□□ 2.77
GTPBP3-227ENST00000602056 SYT17Q9BSW7 474 aa32.34■■■□□ 2.77
GTPBP3-227ENST00000602056 KIF24Q5T7B8 1368 aa32.33■■■□□ 2.77
GTPBP3-227ENST00000602056 KAT6BQ8WYB5 2073 aa32.33■■■□□ 2.77
GTPBP3-227ENST00000602056 TATP17735 454 aaPredicted RBP32.31■■■□□ 2.76
GTPBP3-227ENST00000602056 DCAF8L1A6NGE4 600 aa32.3■■■□□ 2.76
GTPBP3-227ENST00000602056 DOT1LQ8TEK3 1739 aa32.3■■■□□ 2.76
GTPBP3-227ENST00000602056 PNPLA7Q6ZV29 1317 aa32.29■■■□□ 2.76
GTPBP3-227ENST00000602056 KIF20BQ96Q89 1820 aa32.29■■■□□ 2.76
GTPBP3-227ENST00000602056 ARXQ96QS3 562 aa32.29■■■□□ 2.76
GTPBP3-227ENST00000602056 CYP27B1O15528 508 aa32.25■■■□□ 2.75
GTPBP3-227ENST00000602056 CCNL1Q9UK58 526 aaPredicted RBP32.25■■■□□ 2.75
GTPBP3-227ENST00000602056 TFCP2L1Q9NZI6 479 aa32.24■■■□□ 2.75
GTPBP3-227ENST00000602056 PCDH11XQ9BZA7 1347 aa32.24■■■□□ 2.75
GTPBP3-227ENST00000602056 PCDH11YQ9BZA8 1340 aa32.24■■■□□ 2.75
GTPBP3-227ENST00000602056 SLC16A10Q8TF71 515 aa32.23■■■□□ 2.75
GTPBP3-227ENST00000602056 PPM1GO15355 546 aaPredicted RBP32.22■■■□□ 2.75
GTPBP3-227ENST00000602056 NCAPD2Q15021 1401 aa32.22■■■□□ 2.75
GTPBP3-227ENST00000602056 WASHC2AQ641Q2 1341 aa32.21■■■□□ 2.75
GTPBP3-227ENST00000602056 MAP3K5Q99683 1374 aa32.2■■■□□ 2.75
GTPBP3-227ENST00000602056 POLR3GLQ9BT43 218 aa32.2■■■□□ 2.75
GTPBP3-227ENST00000602056 LY75O60449 1722 aa32.2■■■□□ 2.74
GTPBP3-227ENST00000602056 POLKQ9UBT6 870 aa32.19■■■□□ 2.74
GTPBP3-227ENST00000602056 EYA1Q99502 592 aa32.17■■■□□ 2.74
GTPBP3-227ENST00000602056 HSPA5P11021 654 aaKnown RBP32.16■■■□□ 2.74
GTPBP3-227ENST00000602056 MPRIPQ6WCQ1 1025 aa32.15■■■□□ 2.74
GTPBP3-227ENST00000602056 QSER1Q2KHR3 1735 aa32.14■■■□□ 2.74
GTPBP3-227ENST00000602056 COL23A1Q86Y22 540 aaPredicted RBP32.14■■■□□ 2.74
GTPBP3-227ENST00000602056 EIF4G2P78344 907 aaKnown RBP eCLIP32.13■■■□□ 2.73
GTPBP3-227ENST00000602056 PALLDQ8WX93 1383 aa32.12■■■□□ 2.73
GTPBP3-227ENST00000602056 POLD1P28340 1107 aa32.12■■■□□ 2.73
GTPBP3-227ENST00000602056 NKX1-1Q15270 411 aaPredicted RBP32.12■■■□□ 2.73
GTPBP3-227ENST00000602056 TUBGCP6Q96RT7 1819 aa32.12■■■□□ 2.73
GTPBP3-227ENST00000602056 ANKRD26Q9UPS8 1709 aa32.12■■■□□ 2.73
GTPBP3-227ENST00000602056 TNNT2P45379 298 aaPredicted RBP32.11■■■□□ 2.73
GTPBP3-227ENST00000602056 PIGBQ92521 554 aa32.09■■■□□ 2.73
GTPBP3-227ENST00000602056 EIF4A2Q14240 407 aaKnown RBP32.08■■■□□ 2.73
GTPBP3-227ENST00000602056 PANK3Q9H999 370 aa32.08■■■□□ 2.73
GTPBP3-227ENST00000602056 SPG7Q9UQ90 795 aa32.08■■■□□ 2.73
GTPBP3-227ENST00000602056 COL24A1Q17RW2 1714 aa32.08■■■□□ 2.73
GTPBP3-227ENST00000602056 PKD1L3Q7Z443 1732 aa32.07■■■□□ 2.72
GTPBP3-227ENST00000602056 TOGARAM1Q9Y4F4 1720 aa32.07■■■□□ 2.72
GTPBP3-227ENST00000602056 MSH5O43196 834 aa32.06■■■□□ 2.72
GTPBP3-227ENST00000602056 KLHL34Q8N239 644 aa32.06■■■□□ 2.72
GTPBP3-227ENST00000602056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.06■■■□□ 2.72
GTPBP3-227ENST00000602056 UTRNP46939 3433 aa32.04■■■□□ 2.72
GTPBP3-227ENST00000602056 NLGN2Q8NFZ4 835 aa32.04■■■□□ 2.72
GTPBP3-227ENST00000602056 CCER1Q8TC90 406 aaPredicted RBP32.04■■■□□ 2.72
GTPBP3-227ENST00000602056 SMARCC1Q92922 1105 aaPredicted RBP32.04■■■□□ 2.72
GTPBP3-227ENST00000602056 AMIGO3Q86WK7 504 aa32.03■■■□□ 2.72
GTPBP3-227ENST00000602056 MSL1Q68DK7 614 aa32.02■■■□□ 2.72
GTPBP3-227ENST00000602056 PHKG2P15735 406 aa32.01■■■□□ 2.71
GTPBP3-227ENST00000602056 ZNF784Q8NCA9 323 aaPredicted RBP32.01■■■□□ 2.71
GTPBP3-227ENST00000602056 MAP2P11137 1827 aaKnown RBP32■■■□□ 2.71
GTPBP3-227ENST00000602056 GPR162Q16538 588 aa32■■■□□ 2.71
GTPBP3-227ENST00000602056 SMIM5Q71RC9 77 aa31.98■■■□□ 2.71
GTPBP3-227ENST00000602056 IFNL2Q8IZJ0 200 aa31.98■■■□□ 2.71
GTPBP3-227ENST00000602056 C5P01031 1676 aa31.98■■■□□ 2.71
GTPBP3-227ENST00000602056 IGSF1Q8N6C5 1336 aa31.98■■■□□ 2.71
GTPBP3-227ENST00000602056 ASAP1Q9ULH1 1129 aa31.97■■■□□ 2.71
GTPBP3-227ENST00000602056 LOC102724428A0A0B4J2F2 783 aa31.95■■■□□ 2.71
GTPBP3-227ENST00000602056 SIK1P57059 783 aa31.95■■■□□ 2.71
GTPBP3-227ENST00000602056 FLAD1Q8NFF5 587 aa31.95■■■□□ 2.71
GTPBP3-227ENST00000602056 TMOD3Q9NYL9 352 aa31.95■■■□□ 2.71
GTPBP3-227ENST00000602056 ITGB4P16144 1822 aa31.95■■■□□ 2.7
GTPBP3-227ENST00000602056 HMGB2P26583 209 aaKnown RBP31.94■■■□□ 2.7
GTPBP3-227ENST00000602056 LINC00116Q8NCU8 138 aa31.94■■■□□ 2.7
GTPBP3-227ENST00000602056 AK7Q96M32 723 aa31.93■■■□□ 2.7
GTPBP3-227ENST00000602056 ITPK1Q13572 414 aa31.92■■■□□ 2.7
GTPBP3-227ENST00000602056 C4BP0C0L5 1744 aa31.92■■■□□ 2.7
GTPBP3-227ENST00000602056 PELP1Q8IZL8 1130 aaKnown RBP31.91■■■□□ 2.7
GTPBP3-227ENST00000602056 ATG3Q9NT62 314 aa31.91■■■□□ 2.7
GTPBP3-227ENST00000602056 TAF1LQ8IZX4 1826 aa31.91■■■□□ 2.7
GTPBP3-227ENST00000602056 MORC1Q86VD1 984 aa31.9■■■□□ 2.7
GTPBP3-227ENST00000602056 PLEKHG2Q9H7P9 1386 aa31.9■■■□□ 2.7
GTPBP3-227ENST00000602056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.89■■■□□ 2.7
GTPBP3-227ENST00000602056 PHF14O94880 888 aa31.89■■■□□ 2.7
GTPBP3-227ENST00000602056 YBX3P16989 372 aaKnown RBP eCLIP31.88■■■□□ 2.69
GTPBP3-227ENST00000602056 AEBP1Q8IUX7 1158 aa31.87■■■□□ 2.69
GTPBP3-227ENST00000602056 SSFA2P28290 1259 aa31.84■■■□□ 2.69
GTPBP3-227ENST00000602056 ATP6V1AP38606 617 aa31.84■■■□□ 2.69
GTPBP3-227ENST00000602056 CD2APQ9Y5K6 639 aa31.84■■■□□ 2.69
GTPBP3-227ENST00000602056 PLEKHO1Q53GL0 409 aaPredicted RBP31.83■■■□□ 2.69
GTPBP3-227ENST00000602056 SLC4A9Q96Q91 983 aa31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms