RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 PPM1GO15355 546 aaPredicted RBP23.97■■□□□ 1.43
IRF3-230ENST00000601809 MORC1Q86VD1 984 aa23.97■■□□□ 1.43
IRF3-230ENST00000601809 PLSCR1O15162 318 aa23.96■■□□□ 1.43
IRF3-230ENST00000601809 EIF4A2Q14240 407 aaKnown RBP23.96■■□□□ 1.43
IRF3-230ENST00000601809 EYA1Q99502 592 aa23.96■■□□□ 1.43
IRF3-230ENST00000601809 SRCAPQ6ZRS2 3230 aa23.96■■□□□ 1.43
IRF3-230ENST00000601809 KCNQ2O43526 872 aa23.95■■□□□ 1.42
IRF3-230ENST00000601809 BTAF1O14981 1849 aa23.94■■□□□ 1.42
IRF3-230ENST00000601809 DOT1LQ8TEK3 1739 aa23.94■■□□□ 1.42
IRF3-230ENST00000601809 ZCRB1Q8TBF4 217 aaKnown RBP23.94■■□□□ 1.42
IRF3-230ENST00000601809 IGSF1Q8N6C5 1336 aa23.91■■□□□ 1.42
IRF3-230ENST00000601809 PROM2Q8N271 834 aa23.91■■□□□ 1.42
IRF3-230ENST00000601809 TATP17735 454 aaPredicted RBP23.9■■□□□ 1.42
IRF3-230ENST00000601809 DDX54Q8TDD1 881 aaKnown RBP23.9■■□□□ 1.42
IRF3-230ENST00000601809 RAPGEF4Q8WZA2 1011 aa23.9■■□□□ 1.42
IRF3-230ENST00000601809 ACSBG1Q96GR2 724 aa23.9■■□□□ 1.42
IRF3-230ENST00000601809 PLEKHG2Q9H7P9 1386 aa23.89■■□□□ 1.41
IRF3-230ENST00000601809 TOGARAM1Q9Y4F4 1720 aa23.88■■□□□ 1.41
IRF3-230ENST00000601809 CYP27B1O15528 508 aa23.86■■□□□ 1.41
IRF3-230ENST00000601809 CC2D1BQ5T0F9 858 aaKnown RBP23.86■■□□□ 1.41
IRF3-230ENST00000601809 PAPPAQ13219 1627 aa23.85■■□□□ 1.41
IRF3-230ENST00000601809 PCDH11XQ9BZA7 1347 aa23.84■■□□□ 1.41
IRF3-230ENST00000601809 PCDH11YQ9BZA8 1340 aa23.84■■□□□ 1.41
IRF3-230ENST00000601809 COL3A1P02461 1466 aaPredicted RBP23.84■■□□□ 1.41
IRF3-230ENST00000601809 IL13P35225 146 aa23.84■■□□□ 1.41
IRF3-230ENST00000601809 PSDA5PKW4 1024 aaPredicted RBP23.83■■□□□ 1.41
IRF3-230ENST00000601809 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.83■■□□□ 1.41
IRF3-230ENST00000601809 KAT6BQ8WYB5 2073 aa23.82■■□□□ 1.4
IRF3-230ENST00000601809 LY75O60449 1722 aa23.82■■□□□ 1.4
IRF3-230ENST00000601809 KDRP35968 1356 aa23.82■■□□□ 1.4
IRF3-230ENST00000601809 MTHFSP49914 203 aa23.82■■□□□ 1.4
IRF3-230ENST00000601809 LRP5O75197 1615 aa23.81■■□□□ 1.4
IRF3-230ENST00000601809 R3HDM1Q15032 1099 aaKnown RBP23.81■■□□□ 1.4
IRF3-230ENST00000601809 NKX1-1Q15270 411 aaPredicted RBP23.81■■□□□ 1.4
IRF3-230ENST00000601809 TXNRD1Q16881 649 aa23.81■■□□□ 1.4
IRF3-230ENST00000601809 ANO8Q9HCE9 1232 aaPredicted RBP23.81■■□□□ 1.4
IRF3-230ENST00000601809 ITGB4P16144 1822 aa23.81■■□□□ 1.4
IRF3-230ENST00000601809 PRIM1P49642 420 aaKnown RBP23.8■■□□□ 1.4
IRF3-230ENST00000601809 AEBP1Q8IUX7 1158 aa23.78■■□□□ 1.4
IRF3-230ENST00000601809 CASZ1Q86V15 1759 aa23.77■■□□□ 1.4
IRF3-230ENST00000601809 SPG7Q9UQ90 795 aa23.76■■□□□ 1.39
IRF3-230ENST00000601809 LRRC4BQ9NT99 713 aa23.75■■□□□ 1.39
IRF3-230ENST00000601809 PHKG2P15735 406 aa23.74■■□□□ 1.39
IRF3-230ENST00000601809 NBPF14Q5TI25 921 aa23.74■■□□□ 1.39
IRF3-230ENST00000601809 SULT6B1Q6IMI4 303 aa23.71■■□□□ 1.39
IRF3-230ENST00000601809 SYTL4Q96C24 671 aaPredicted RBP23.71■■□□□ 1.39
IRF3-230ENST00000601809 IFNL2Q8IZJ0 200 aa23.7■■□□□ 1.38
IRF3-230ENST00000601809 KDM6AO15550 1401 aaPredicted RBP23.68■■□□□ 1.38
IRF3-230ENST00000601809 QSER1Q2KHR3 1735 aa23.68■■□□□ 1.38
IRF3-230ENST00000601809 DIAPH1O60610 1272 aaKnown RBP23.68■■□□□ 1.38
IRF3-230ENST00000601809 CNGB1Q14028 1251 aaPredicted RBP23.68■■□□□ 1.38
IRF3-230ENST00000601809 SLC27A3Q5K4L6 730 aa23.68■■□□□ 1.38
IRF3-230ENST00000601809 PPP2R1AP30153 589 aa23.67■■□□□ 1.38
IRF3-230ENST00000601809 SLC15A2Q16348 729 aa23.67■■□□□ 1.38
IRF3-230ENST00000601809 PLEKHO1Q53GL0 409 aaPredicted RBP23.67■■□□□ 1.38
IRF3-230ENST00000601809 TUBGCP6Q96RT7 1819 aa23.67■■□□□ 1.38
IRF3-230ENST00000601809 AMOTQ4VCS5 1084 aa23.66■■□□□ 1.38
IRF3-230ENST00000601809 PIGBQ92521 554 aa23.66■■□□□ 1.38
IRF3-230ENST00000601809 TAF1LQ8IZX4 1826 aa23.66■■□□□ 1.38
IRF3-230ENST00000601809 ADAMTS7Q9UKP4 1686 aa23.65■■□□□ 1.38
IRF3-230ENST00000601809 ZNF827Q17R98 1081 aa23.65■■□□□ 1.38
IRF3-230ENST00000601809 AKT1S1Q96B36 256 aa23.65■■□□□ 1.38
IRF3-230ENST00000601809 PDGFDQ9GZP0 370 aaPredicted RBP23.65■■□□□ 1.38
IRF3-230ENST00000601809 MPRIPQ6WCQ1 1025 aa23.64■■□□□ 1.37
IRF3-230ENST00000601809 SCN11AQ9UI33 1791 aa23.64■■□□□ 1.37
IRF3-230ENST00000601809 C5P01031 1676 aa23.64■■□□□ 1.37
IRF3-230ENST00000601809 KCNQ4P56696 695 aa23.63■■□□□ 1.37
IRF3-230ENST00000601809 ZNF530Q6P9A1 599 aaPredicted RBP23.63■■□□□ 1.37
IRF3-230ENST00000601809 PALLDQ8WX93 1383 aa23.63■■□□□ 1.37
IRF3-230ENST00000601809 HMOX1P09601 288 aa23.62■■□□□ 1.37
IRF3-230ENST00000601809 STK32BQ9NY57 414 aa23.62■■□□□ 1.37
IRF3-230ENST00000601809 DCAF5Q96JK2 942 aa23.61■■□□□ 1.37
IRF3-230ENST00000601809 VIRMAQ69YN4 1812 aaKnown RBP23.61■■□□□ 1.37
IRF3-230ENST00000601809 ERVV-2B6SEH9 535 aa23.6■■□□□ 1.37
IRF3-230ENST00000601809 HSP90AB1P08238 724 aaKnown RBP23.59■■□□□ 1.37
IRF3-230ENST00000601809 ZEB1P37275 1124 aaPredicted RBP23.59■■□□□ 1.37
IRF3-230ENST00000601809 CCNL1Q9UK58 526 aaPredicted RBP23.59■■□□□ 1.37
IRF3-230ENST00000601809 COL24A1Q17RW2 1714 aa23.59■■□□□ 1.37
IRF3-230ENST00000601809 ZNF831Q5JPB2 1677 aa23.58■■□□□ 1.37
IRF3-230ENST00000601809 TMOD3Q9NYL9 352 aa23.58■■□□□ 1.37
IRF3-230ENST00000601809 MRC1P22897 1456 aa23.57■■□□□ 1.36
IRF3-230ENST00000601809 SMARCC1Q92922 1105 aaPredicted RBP23.57■■□□□ 1.36
IRF3-230ENST00000601809 ASAP1Q9ULH1 1129 aa23.57■■□□□ 1.36
IRF3-230ENST00000601809 DDX10Q13206 875 aaKnown RBP23.56■■□□□ 1.36
IRF3-230ENST00000601809 ATG3Q9NT62 314 aa23.56■■□□□ 1.36
IRF3-230ENST00000601809 MTHFSDQ2M296 383 aaKnown RBP23.55■■□□□ 1.36
IRF3-230ENST00000601809 AKAP4Q5JQC9 854 aa23.55■■□□□ 1.36
IRF3-230ENST00000601809 C4BP0C0L5 1744 aa23.55■■□□□ 1.36
IRF3-230ENST00000601809 C1orf141Q5JVX7 400 aa23.54■■□□□ 1.36
IRF3-230ENST00000601809 CFAP53Q96M91 514 aa23.54■■□□□ 1.36
IRF3-230ENST00000601809 RSPH6AQ9H0K4 717 aa23.54■■□□□ 1.36
IRF3-230ENST00000601809 PNPLA7Q6ZV29 1317 aa23.54■■□□□ 1.36
IRF3-230ENST00000601809 U2SURPO15042 1029 aaKnown RBP23.53■■□□□ 1.36
IRF3-230ENST00000601809 CICQ96RK0 1608 aaPredicted RBP23.52■■□□□ 1.36
IRF3-230ENST00000601809 PTGER2P43116 358 aa23.52■■□□□ 1.36
IRF3-230ENST00000601809 SGIP1Q9BQI5 828 aa23.52■■□□□ 1.36
IRF3-230ENST00000601809 SPON1Q9HCB6 807 aa23.52■■□□□ 1.36
IRF3-230ENST00000601809 UBR3Q6ZT12 1888 aa23.51■■□□□ 1.35
IRF3-230ENST00000601809 LOC102724428A0A0B4J2F2 783 aa23.51■■□□□ 1.35
IRF3-230ENST00000601809 SIK1P57059 783 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms