RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-231ENST00000600648 CASZ1Q86V15 1759 aa29.92■■■□□ 2.38
FARP1-231ENST00000600648 ATF5Q9Y2D1 282 aaPredicted RBP29.91■■■□□ 2.38
FARP1-231ENST00000600648 PRIM1P49642 420 aaKnown RBP29.9■■■□□ 2.38
FARP1-231ENST00000600648 EMILIN1Q9Y6C2 1016 aa29.9■■■□□ 2.38
FARP1-231ENST00000600648 INSRP06213 1382 aa29.9■■■□□ 2.38
FARP1-231ENST00000600648 FLT4P35916 1363 aa29.9■■■□□ 2.38
FARP1-231ENST00000600648 RAPGEF4Q8WZA2 1011 aa29.89■■■□□ 2.38
FARP1-231ENST00000600648 PPM1GO15355 546 aaPredicted RBP29.88■■■□□ 2.37
FARP1-231ENST00000600648 LRRC4BQ9NT99 713 aa29.88■■■□□ 2.37
FARP1-231ENST00000600648 HSPA5P11021 654 aaKnown RBP29.85■■■□□ 2.37
FARP1-231ENST00000600648 TATP17735 454 aaPredicted RBP29.85■■■□□ 2.37
FARP1-231ENST00000600648 EIF4G2P78344 907 aaKnown RBP eCLIP29.85■■■□□ 2.37
FARP1-231ENST00000600648 ZNF827Q17R98 1081 aa29.84■■■□□ 2.37
FARP1-231ENST00000600648 SHANK3Q9BYB0 1731 aa29.84■■■□□ 2.37
FARP1-231ENST00000600648 DOT1LQ8TEK3 1739 aa29.83■■■□□ 2.37
FARP1-231ENST00000600648 CGNL1Q0VF96 1302 aa29.83■■■□□ 2.37
FARP1-231ENST00000600648 KCNQ4P56696 695 aa29.83■■■□□ 2.37
FARP1-231ENST00000600648 KIF24Q5T7B8 1368 aa29.82■■■□□ 2.36
FARP1-231ENST00000600648 PTGER2P43116 358 aa29.82■■■□□ 2.36
FARP1-231ENST00000600648 PAPPAQ13219 1627 aa29.82■■■□□ 2.36
FARP1-231ENST00000600648 NSD2O96028 1365 aa29.8■■■□□ 2.36
FARP1-231ENST00000600648 SLC27A3Q5K4L6 730 aa29.79■■■□□ 2.36
FARP1-231ENST00000600648 MTFR1LQ9H019 292 aa29.79■■■□□ 2.36
FARP1-231ENST00000600648 TNNT2P45379 298 aaPredicted RBP29.78■■■□□ 2.36
FARP1-231ENST00000600648 AKT1S1Q96B36 256 aa29.75■■■□□ 2.35
FARP1-231ENST00000600648 PCDH11XQ9BZA7 1347 aa29.74■■■□□ 2.35
FARP1-231ENST00000600648 PCDH11YQ9BZA8 1340 aa29.74■■■□□ 2.35
FARP1-231ENST00000600648 POLKQ9UBT6 870 aa29.74■■■□□ 2.35
FARP1-231ENST00000600648 PANK3Q9H999 370 aa29.73■■■□□ 2.35
FARP1-231ENST00000600648 WASHC2AQ641Q2 1341 aa29.72■■■□□ 2.35
FARP1-231ENST00000600648 DCAF8L1A6NGE4 600 aa29.72■■■□□ 2.35
FARP1-231ENST00000600648 CYP27B1O15528 508 aa29.72■■■□□ 2.35
FARP1-231ENST00000600648 CCNL1Q9UK58 526 aaPredicted RBP29.72■■■□□ 2.35
FARP1-231ENST00000600648 TFCP2L1Q9NZI6 479 aa29.71■■■□□ 2.35
FARP1-231ENST00000600648 EYA1Q99502 592 aa29.7■■■□□ 2.35
FARP1-231ENST00000600648 SGIP1Q9BQI5 828 aa29.7■■■□□ 2.35
FARP1-231ENST00000600648 FHDC1Q9C0D6 1143 aaPredicted RBP29.7■■■□□ 2.35
FARP1-231ENST00000600648 MAP2P11137 1827 aaKnown RBP29.7■■■□□ 2.34
FARP1-231ENST00000600648 MPRIPQ6WCQ1 1025 aa29.68■■■□□ 2.34
FARP1-231ENST00000600648 PNPLA7Q6ZV29 1317 aa29.68■■■□□ 2.34
FARP1-231ENST00000600648 ANKRD26Q9UPS8 1709 aa29.68■■■□□ 2.34
FARP1-231ENST00000600648 LY75O60449 1722 aa29.67■■■□□ 2.34
FARP1-231ENST00000600648 ARXQ96QS3 562 aa29.66■■■□□ 2.34
FARP1-231ENST00000600648 NCAPD2Q15021 1401 aa29.65■■■□□ 2.34
FARP1-231ENST00000600648 YY1P25490 414 aa29.65■■■□□ 2.34
FARP1-231ENST00000600648 SYT17Q9BSW7 474 aa29.65■■■□□ 2.34
FARP1-231ENST00000600648 EIF4A2Q14240 407 aaKnown RBP29.64■■■□□ 2.34
FARP1-231ENST00000600648 SPG7Q9UQ90 795 aa29.64■■■□□ 2.34
FARP1-231ENST00000600648 SLC16A10Q8TF71 515 aa29.61■■■□□ 2.33
FARP1-231ENST00000600648 PKD1L3Q7Z443 1732 aa29.61■■■□□ 2.33
FARP1-231ENST00000600648 PALLDQ8WX93 1383 aa29.61■■■□□ 2.33
FARP1-231ENST00000600648 TUBGCP6Q96RT7 1819 aa29.6■■■□□ 2.33
FARP1-231ENST00000600648 MSH5O43196 834 aa29.6■■■□□ 2.33
FARP1-231ENST00000600648 TOGARAM1Q9Y4F4 1720 aa29.59■■■□□ 2.33
FARP1-231ENST00000600648 KLHL34Q8N239 644 aa29.59■■■□□ 2.33
FARP1-231ENST00000600648 QSER1Q2KHR3 1735 aa29.58■■■□□ 2.33
FARP1-231ENST00000600648 MORC1Q86VD1 984 aa29.58■■■□□ 2.33
FARP1-231ENST00000600648 POLD1P28340 1107 aa29.57■■■□□ 2.32
FARP1-231ENST00000600648 PIGBQ92521 554 aa29.57■■■□□ 2.32
FARP1-231ENST00000600648 NKX1-1Q15270 411 aaPredicted RBP29.56■■■□□ 2.32
FARP1-231ENST00000600648 COL23A1Q86Y22 540 aaPredicted RBP29.55■■■□□ 2.32
FARP1-231ENST00000600648 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.55■■■□□ 2.32
FARP1-231ENST00000600648 SMARCC1Q92922 1105 aaPredicted RBP29.54■■■□□ 2.32
FARP1-231ENST00000600648 KNSTRNQ9Y448 316 aa29.54■■■□□ 2.32
FARP1-231ENST00000600648 ITGB4P16144 1822 aa29.54■■■□□ 2.32
FARP1-231ENST00000600648 PHKG2P15735 406 aa29.53■■■□□ 2.32
FARP1-231ENST00000600648 IFNL2Q8IZJ0 200 aa29.53■■■□□ 2.32
FARP1-231ENST00000600648 MSL1Q68DK7 614 aa29.51■■■□□ 2.31
FARP1-231ENST00000600648 TMOD3Q9NYL9 352 aa29.51■■■□□ 2.31
FARP1-231ENST00000600648 UTRNP46939 3433 aa29.51■■■□□ 2.31
FARP1-231ENST00000600648 C5P01031 1676 aa29.5■■■□□ 2.31
FARP1-231ENST00000600648 IGSF1Q8N6C5 1336 aa29.5■■■□□ 2.31
FARP1-231ENST00000600648 KIF7Q2M1P5 1343 aa29.49■■■□□ 2.31
FARP1-231ENST00000600648 MAP3K5Q99683 1374 aa29.49■■■□□ 2.31
FARP1-231ENST00000600648 ASAP1Q9ULH1 1129 aa29.47■■■□□ 2.31
FARP1-231ENST00000600648 AK7Q96M32 723 aa29.46■■■□□ 2.31
FARP1-231ENST00000600648 SMIM5Q71RC9 77 aa29.45■■■□□ 2.31
FARP1-231ENST00000600648 AEBP1Q8IUX7 1158 aa29.45■■■□□ 2.31
FARP1-231ENST00000600648 TAF1LQ8IZX4 1826 aa29.44■■■□□ 2.3
FARP1-231ENST00000600648 LOC102724428A0A0B4J2F2 783 aa29.44■■■□□ 2.3
FARP1-231ENST00000600648 SIK1P57059 783 aa29.44■■■□□ 2.3
FARP1-231ENST00000600648 COL24A1Q17RW2 1714 aa29.43■■■□□ 2.3
FARP1-231ENST00000600648 PHF14O94880 888 aa29.43■■■□□ 2.3
FARP1-231ENST00000600648 HMGB2P26583 209 aaKnown RBP29.43■■■□□ 2.3
FARP1-231ENST00000600648 PLEKHO1Q53GL0 409 aaPredicted RBP29.43■■■□□ 2.3
FARP1-231ENST00000600648 AMER1Q5JTC6 1135 aaPredicted RBP29.43■■■□□ 2.3
FARP1-231ENST00000600648 AMIGO3Q86WK7 504 aa29.43■■■□□ 2.3
FARP1-231ENST00000600648 PELP1Q8IZL8 1130 aaKnown RBP29.43■■■□□ 2.3
FARP1-231ENST00000600648 GPR162Q16538 588 aa29.42■■■□□ 2.3
FARP1-231ENST00000600648 ZNF530Q6P9A1 599 aaPredicted RBP29.42■■■□□ 2.3
FARP1-231ENST00000600648 NLGN2Q8NFZ4 835 aa29.42■■■□□ 2.3
FARP1-231ENST00000600648 C4BP0C0L5 1744 aa29.42■■■□□ 2.3
FARP1-231ENST00000600648 LINC00116Q8NCU8 138 aa29.41■■■□□ 2.3
FARP1-231ENST00000600648 FLAD1Q8NFF5 587 aa29.41■■■□□ 2.3
FARP1-231ENST00000600648 ATG3Q9NT62 314 aa29.41■■■□□ 2.3
FARP1-231ENST00000600648 ATP6V1AP38606 617 aa29.39■■■□□ 2.3
FARP1-231ENST00000600648 ITPK1Q13572 414 aa29.39■■■□□ 2.3
FARP1-231ENST00000600648 SULT6B1Q6IMI4 303 aa29.39■■■□□ 2.3
FARP1-231ENST00000600648 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.37■■■□□ 2.29
FARP1-231ENST00000600648 HSP90AB1P08238 724 aaKnown RBP29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms