RNA–Protein interactions for RNA: ENST00000600447.1

PPFIA4-212, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 385 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-212ENST00000600447 DDX54Q8TDD1 881 aaKnown RBP19.83■□□□□ 0.77
PPFIA4-212ENST00000600447 USHBP1Q8N6Y0 703 aa19.82■□□□□ 0.76
PPFIA4-212ENST00000600447 NSD2O96028 1365 aa19.82■□□□□ 0.76
PPFIA4-212ENST00000600447 WASHC2AQ641Q2 1341 aa19.81■□□□□ 0.76
PPFIA4-212ENST00000600447 TXNRD1Q16881 649 aa19.81■□□□□ 0.76
PPFIA4-212ENST00000600447 RAPGEF4Q8WZA2 1011 aa19.81■□□□□ 0.76
PPFIA4-212ENST00000600447 DOT1LQ8TEK3 1739 aa19.81■□□□□ 0.76
PPFIA4-212ENST00000600447 PPM1GO15355 546 aaPredicted RBP19.8■□□□□ 0.76
PPFIA4-212ENST00000600447 POLKQ9UBT6 870 aa19.8■□□□□ 0.76
PPFIA4-212ENST00000600447 NCAPD2Q15021 1401 aa19.79■□□□□ 0.76
PPFIA4-212ENST00000600447 TATP17735 454 aaPredicted RBP19.79■□□□□ 0.76
PPFIA4-212ENST00000600447 ANO8Q9HCE9 1232 aaPredicted RBP19.78■□□□□ 0.76
PPFIA4-212ENST00000600447 KIF7Q2M1P5 1343 aa19.77■□□□□ 0.76
PPFIA4-212ENST00000600447 PKD1L3Q7Z443 1732 aa19.77■□□□□ 0.76
PPFIA4-212ENST00000600447 TNNT2P45379 298 aaPredicted RBP19.77■□□□□ 0.76
PPFIA4-212ENST00000600447 CASZ1Q86V15 1759 aa19.77■□□□□ 0.76
PPFIA4-212ENST00000600447 KNSTRNQ9Y448 316 aa19.75■□□□□ 0.75
PPFIA4-212ENST00000600447 PAPPAQ13219 1627 aa19.75■□□□□ 0.75
PPFIA4-212ENST00000600447 PCDH11XQ9BZA7 1347 aa19.75■□□□□ 0.75
PPFIA4-212ENST00000600447 PCDH11YQ9BZA8 1340 aa19.75■□□□□ 0.75
PPFIA4-212ENST00000600447 PRIM1P49642 420 aaKnown RBP19.74■□□□□ 0.75
PPFIA4-212ENST00000600447 EYA1Q99502 592 aa19.73■□□□□ 0.75
PPFIA4-212ENST00000600447 STK32BQ9NY57 414 aa19.73■□□□□ 0.75
PPFIA4-212ENST00000600447 LY75O60449 1722 aa19.73■□□□□ 0.75
PPFIA4-212ENST00000600447 EIF4A2Q14240 407 aaKnown RBP19.72■□□□□ 0.75
PPFIA4-212ENST00000600447 SLC15A2Q16348 729 aa19.72■□□□□ 0.75
PPFIA4-212ENST00000600447 MORC1Q86VD1 984 aa19.72■□□□□ 0.75
PPFIA4-212ENST00000600447 SYTL4Q96C24 671 aaPredicted RBP19.72■□□□□ 0.75
PPFIA4-212ENST00000600447 CYP27B1O15528 508 aa19.7■□□□□ 0.74
PPFIA4-212ENST00000600447 AMER1Q5JTC6 1135 aaPredicted RBP19.7■□□□□ 0.74
PPFIA4-212ENST00000600447 SPON1Q9HCB6 807 aa19.7■□□□□ 0.74
PPFIA4-212ENST00000600447 ITGB4P16144 1822 aa19.69■□□□□ 0.74
PPFIA4-212ENST00000600447 SLC27A3Q5K4L6 730 aa19.69■□□□□ 0.74
PPFIA4-212ENST00000600447 LRRC4BQ9NT99 713 aa19.69■□□□□ 0.74
PPFIA4-212ENST00000600447 PLEKHG2Q9H7P9 1386 aa19.69■□□□□ 0.74
PPFIA4-212ENST00000600447 TOGARAM1Q9Y4F4 1720 aa19.68■□□□□ 0.74
PPFIA4-212ENST00000600447 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.68■□□□□ 0.74
PPFIA4-212ENST00000600447 SPG7Q9UQ90 795 aa19.68■□□□□ 0.74
PPFIA4-212ENST00000600447 QSER1Q2KHR3 1735 aa19.68■□□□□ 0.74
PPFIA4-212ENST00000600447 PDGFDQ9GZP0 370 aaPredicted RBP19.67■□□□□ 0.74
PPFIA4-212ENST00000600447 IGSF1Q8N6C5 1336 aa19.67■□□□□ 0.74
PPFIA4-212ENST00000600447 PER1O15534 1290 aaPredicted RBP19.66■□□□□ 0.74
PPFIA4-212ENST00000600447 NKX1-1Q15270 411 aaPredicted RBP19.65■□□□□ 0.74
PPFIA4-212ENST00000600447 TUBGCP6Q96RT7 1819 aa19.63■□□□□ 0.73
PPFIA4-212ENST00000600447 ZNF827Q17R98 1081 aa19.63■□□□□ 0.73
PPFIA4-212ENST00000600447 ZBTB7AO95365 584 aa19.62■□□□□ 0.73
PPFIA4-212ENST00000600447 AKT1S1Q96B36 256 aa19.62■□□□□ 0.73
PPFIA4-212ENST00000600447 PPP1R1BQ9UD71 204 aaPredicted RBP19.62■□□□□ 0.73
PPFIA4-212ENST00000600447 MPRIPQ6WCQ1 1025 aa19.61■□□□□ 0.73
PPFIA4-212ENST00000600447 CCNL1Q9UK58 526 aaPredicted RBP19.61■□□□□ 0.73
PPFIA4-212ENST00000600447 TAF1LQ8IZX4 1826 aa19.6■□□□□ 0.73
PPFIA4-212ENST00000600447 NPC1L1Q9UHC9 1359 aa19.6■□□□□ 0.73
PPFIA4-212ENST00000600447 C5P01031 1676 aa19.6■□□□□ 0.73
PPFIA4-212ENST00000600447 PHKG2P15735 406 aa19.6■□□□□ 0.73
PPFIA4-212ENST00000600447 KCNQ4P56696 695 aa19.6■□□□□ 0.73
PPFIA4-212ENST00000600447 IFNL2Q8IZJ0 200 aa19.6■□□□□ 0.73
PPFIA4-212ENST00000600447 MTFR1LQ9H019 292 aa19.6■□□□□ 0.73
PPFIA4-212ENST00000600447 PTGER2P43116 358 aa19.59■□□□□ 0.73
PPFIA4-212ENST00000600447 PALLDQ8WX93 1383 aa19.58■□□□□ 0.73
PPFIA4-212ENST00000600447 ATF5Q9Y2D1 282 aaPredicted RBP19.58■□□□□ 0.72
PPFIA4-212ENST00000600447 HMGB2P26583 209 aaKnown RBP19.57■□□□□ 0.72
PPFIA4-212ENST00000600447 IL13P35225 146 aa19.57■□□□□ 0.72
PPFIA4-212ENST00000600447 CC2D1BQ5T0F9 858 aaKnown RBP19.57■□□□□ 0.72
PPFIA4-212ENST00000600447 PIGBQ92521 554 aa19.57■□□□□ 0.72
PPFIA4-212ENST00000600447 SMARCC1Q92922 1105 aaPredicted RBP19.57■□□□□ 0.72
PPFIA4-212ENST00000600447 TFCP2L1Q9NZI6 479 aa19.57■□□□□ 0.72
PPFIA4-212ENST00000600447 KDRP35968 1356 aa19.57■□□□□ 0.72
PPFIA4-212ENST00000600447 MTHFSP49914 203 aa19.56■□□□□ 0.72
PPFIA4-212ENST00000600447 PLEKHO1Q53GL0 409 aaPredicted RBP19.56■□□□□ 0.72
PPFIA4-212ENST00000600447 COL24A1Q17RW2 1714 aa19.56■□□□□ 0.72
PPFIA4-212ENST00000600447 PNPLA7Q6ZV29 1317 aa19.55■□□□□ 0.72
PPFIA4-212ENST00000600447 AMOTQ4VCS5 1084 aa19.55■□□□□ 0.72
PPFIA4-212ENST00000600447 AEBP1Q8IUX7 1158 aa19.55■□□□□ 0.72
PPFIA4-212ENST00000600447 TMOD3Q9NYL9 352 aa19.55■□□□□ 0.72
PPFIA4-212ENST00000600447 SULT6B1Q6IMI4 303 aa19.54■□□□□ 0.72
PPFIA4-212ENST00000600447 SLC16A10Q8TF71 515 aa19.54■□□□□ 0.72
PPFIA4-212ENST00000600447 SGIP1Q9BQI5 828 aa19.54■□□□□ 0.72
PPFIA4-212ENST00000600447 HSP90AB1P08238 724 aaKnown RBP19.53■□□□□ 0.72
PPFIA4-212ENST00000600447 C4BP0C0L5 1744 aa19.52■□□□□ 0.72
PPFIA4-212ENST00000600447 ERVV-2B6SEH9 535 aa19.52■□□□□ 0.72
PPFIA4-212ENST00000600447 ZNF530Q6P9A1 599 aaPredicted RBP19.52■□□□□ 0.72
PPFIA4-212ENST00000600447 DCAF5Q96JK2 942 aa19.52■□□□□ 0.72
PPFIA4-212ENST00000600447 KDM6AO15550 1401 aaPredicted RBP19.5■□□□□ 0.71
PPFIA4-212ENST00000600447 DIAPH1O60610 1272 aaKnown RBP19.49■□□□□ 0.71
PPFIA4-212ENST00000600447 ASAP1Q9ULH1 1129 aa19.49■□□□□ 0.71
PPFIA4-212ENST00000600447 UBR3Q6ZT12 1888 aa19.49■□□□□ 0.71
PPFIA4-212ENST00000600447 SCN11AQ9UI33 1791 aa19.49■□□□□ 0.71
PPFIA4-212ENST00000600447 COL3A1P02461 1466 aaPredicted RBP19.48■□□□□ 0.71
PPFIA4-212ENST00000600447 LOC102724428A0A0B4J2F2 783 aa19.48■□□□□ 0.71
PPFIA4-212ENST00000600447 SIK1P57059 783 aa19.48■□□□□ 0.71
PPFIA4-212ENST00000600447 C1orf141Q5JVX7 400 aa19.48■□□□□ 0.71
PPFIA4-212ENST00000600447 ARXQ96QS3 562 aa19.48■□□□□ 0.71
PPFIA4-212ENST00000600447 ZNF831Q5JPB2 1677 aa19.48■□□□□ 0.71
PPFIA4-212ENST00000600447 VIRMAQ69YN4 1812 aaKnown RBP19.48■□□□□ 0.71
PPFIA4-212ENST00000600447 CNGB1Q14028 1251 aaPredicted RBP19.46■□□□□ 0.71
PPFIA4-212ENST00000600447 COL23A1Q86Y22 540 aaPredicted RBP19.46■□□□□ 0.71
PPFIA4-212ENST00000600447 FLAD1Q8NFF5 587 aa19.46■□□□□ 0.71
PPFIA4-212ENST00000600447 FHDC1Q9C0D6 1143 aaPredicted RBP19.46■□□□□ 0.71
PPFIA4-212ENST00000600447 ATG3Q9NT62 314 aa19.46■□□□□ 0.71
PPFIA4-212ENST00000600447 MAP3K5Q99683 1374 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms