RNA–Protein interactions for RNA: ENST00000600408.1

KCNN4-206, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 2

Gene KCNN4, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-206ENST00000600408 CCDC125Q86Z20 511 aa23.37■■□□□ 1.33
KCNN4-206ENST00000600408 SPG7Q9UQ90 795 aa23.37■■□□□ 1.33
KCNN4-206ENST00000600408 U2SURPO15042 1029 aaKnown RBP23.36■■□□□ 1.33
KCNN4-206ENST00000600408 ANP32CO43423 234 aa23.36■■□□□ 1.33
KCNN4-206ENST00000600408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.36■■□□□ 1.33
KCNN4-206ENST00000600408 KDRP35968 1356 aa23.36■■□□□ 1.33
KCNN4-206ENST00000600408 PCDH11XQ9BZA7 1347 aa23.35■■□□□ 1.33
KCNN4-206ENST00000600408 PCDH11YQ9BZA8 1340 aa23.35■■□□□ 1.33
KCNN4-206ENST00000600408 BCL9O00512 1426 aa23.34■■□□□ 1.33
KCNN4-206ENST00000600408 FAM182BQ5T319 152 aa23.34■■□□□ 1.33
KCNN4-206ENST00000600408 MARCH10Q8NA82 808 aaPredicted RBP23.34■■□□□ 1.33
KCNN4-206ENST00000600408 DDX54Q8TDD1 881 aaKnown RBP23.34■■□□□ 1.33
KCNN4-206ENST00000600408 SF3B2Q13435 895 aaKnown RBP23.33■■□□□ 1.33
KCNN4-206ENST00000600408 UPF1Q92900 1129 aaKnown RBP eCLIP23.33■■□□□ 1.33
KCNN4-206ENST00000600408 AMOTQ4VCS5 1084 aa23.32■■□□□ 1.32
KCNN4-206ENST00000600408 PLEKHO1Q53GL0 409 aaPredicted RBP23.31■■□□□ 1.32
KCNN4-206ENST00000600408 AEBP1Q8IUX7 1158 aa23.31■■□□□ 1.32
KCNN4-206ENST00000600408 PKD1L3Q7Z443 1732 aa23.3■■□□□ 1.32
KCNN4-206ENST00000600408 HMOX1P09601 288 aa23.3■■□□□ 1.32
KCNN4-206ENST00000600408 U2AF1L5P0DN76 240 aaPredicted RBP23.29■■□□□ 1.32
KCNN4-206ENST00000600408 U2AF1Q01081 240 aaKnown RBP eCLIP23.29■■□□□ 1.32
KCNN4-206ENST00000600408 SHANK3Q9BYB0 1731 aa23.26■■□□□ 1.31
KCNN4-206ENST00000600408 TRIM37O94972 964 aa23.26■■□□□ 1.31
KCNN4-206ENST00000600408 IFNL2Q8IZJ0 200 aa23.26■■□□□ 1.31
KCNN4-206ENST00000600408 EP400Q96L91 3159 aa23.26■■□□□ 1.31
KCNN4-206ENST00000600408 PNNQ9H307 717 aaKnown RBP23.25■■□□□ 1.31
KCNN4-206ENST00000600408 FCHSD2O94868 740 aa23.24■■□□□ 1.31
KCNN4-206ENST00000600408 NEFMP07197 916 aa23.24■■□□□ 1.31
KCNN4-206ENST00000600408 HSP90AB1P08238 724 aaKnown RBP23.24■■□□□ 1.31
KCNN4-206ENST00000600408 C1orf141Q5JVX7 400 aa23.24■■□□□ 1.31
KCNN4-206ENST00000600408 CYP27B1O15528 508 aa23.23■■□□□ 1.31
KCNN4-206ENST00000600408 ZNF530Q6P9A1 599 aaPredicted RBP23.23■■□□□ 1.31
KCNN4-206ENST00000600408 BCL11BQ9C0K0 894 aaPredicted RBP23.23■■□□□ 1.31
KCNN4-206ENST00000600408 BAG6P46379 1132 aa23.22■■□□□ 1.31
KCNN4-206ENST00000600408 PHKG2P15735 406 aa23.21■■□□□ 1.31
KCNN4-206ENST00000600408 WDR43Q15061 677 aaKnown RBP eCLIP23.21■■□□□ 1.31
KCNN4-206ENST00000600408 NKX1-1Q15270 411 aaPredicted RBP23.21■■□□□ 1.31
KCNN4-206ENST00000600408 RSPH6AQ9H0K4 717 aa23.21■■□□□ 1.31
KCNN4-206ENST00000600408 PRKAR2BP31323 418 aa23.2■■□□□ 1.3
KCNN4-206ENST00000600408 NHSQ6T4R5 1651 aa23.19■■□□□ 1.3
KCNN4-206ENST00000600408 GAS2L2Q8NHY3 880 aa23.19■■□□□ 1.3
KCNN4-206ENST00000600408 ACSBG1Q96GR2 724 aa23.19■■□□□ 1.3
KCNN4-206ENST00000600408 SBF2Q86WG5 1849 aa23.19■■□□□ 1.3
KCNN4-206ENST00000600408 APBA3O96018 575 aa23.18■■□□□ 1.3
KCNN4-206ENST00000600408 SYTL4Q96C24 671 aaPredicted RBP23.18■■□□□ 1.3
KCNN4-206ENST00000600408 TNS1Q9HBL0 1735 aaKnown RBP23.18■■□□□ 1.3
KCNN4-206ENST00000600408 AKAP4Q5JQC9 854 aa23.17■■□□□ 1.3
KCNN4-206ENST00000600408 DCAF5Q96JK2 942 aa23.17■■□□□ 1.3
KCNN4-206ENST00000600408 DOT1LQ8TEK3 1739 aa23.16■■□□□ 1.3
KCNN4-206ENST00000600408 PRIM1P49642 420 aaKnown RBP23.15■■□□□ 1.3
KCNN4-206ENST00000600408 MAPK8IP3Q9UPT6 1336 aa23.14■■□□□ 1.3
KCNN4-206ENST00000600408 KCNQ2O43526 872 aa23.14■■□□□ 1.29
KCNN4-206ENST00000600408 MTHFSDQ2M296 383 aaKnown RBP23.14■■□□□ 1.29
KCNN4-206ENST00000600408 ERVV-2B6SEH9 535 aa23.12■■□□□ 1.29
KCNN4-206ENST00000600408 MRS2Q9HD23 443 aa23.12■■□□□ 1.29
KCNN4-206ENST00000600408 PLSCR1O15162 318 aa23.11■■□□□ 1.29
KCNN4-206ENST00000600408 DEFB132Q7Z7B7 95 aa23.11■■□□□ 1.29
KCNN4-206ENST00000600408 TMOD3Q9NYL9 352 aa23.11■■□□□ 1.29
KCNN4-206ENST00000600408 GNAT3A8MTJ3 354 aa23.1■■□□□ 1.29
KCNN4-206ENST00000600408 EN1Q05925 392 aaPredicted RBP23.1■■□□□ 1.29
KCNN4-206ENST00000600408 PHACTR3Q96KR7 559 aa23.1■■□□□ 1.29
KCNN4-206ENST00000600408 MAP3K5Q99683 1374 aa23.1■■□□□ 1.29
KCNN4-206ENST00000600408 DIEXFQ68CQ4 756 aaKnown RBP23.09■■□□□ 1.29
KCNN4-206ENST00000600408 MPRIPQ6WCQ1 1025 aa23.09■■□□□ 1.29
KCNN4-206ENST00000600408 RGPD3A6NKT7 1758 aaPredicted RBP23.09■■□□□ 1.29
KCNN4-206ENST00000600408 RGPD4Q7Z3J3 1758 aa23.09■■□□□ 1.29
KCNN4-206ENST00000600408 KAT6BQ8WYB5 2073 aa23.09■■□□□ 1.29
KCNN4-206ENST00000600408 TOGARAM1Q9Y4F4 1720 aa23.08■■□□□ 1.29
KCNN4-206ENST00000600408 CABP4P57796 275 aa23.08■■□□□ 1.29
KCNN4-206ENST00000600408 PTF1AQ7RTS3 328 aa23.08■■□□□ 1.29
KCNN4-206ENST00000600408 PLEKHF1Q96S99 279 aa23.08■■□□□ 1.29
KCNN4-206ENST00000600408 BTAF1O14981 1849 aa23.08■■□□□ 1.28
KCNN4-206ENST00000600408 KDM6AO15550 1401 aaPredicted RBP23.08■■□□□ 1.28
KCNN4-206ENST00000600408 ADAMTS8Q9UP79 889 aa23.07■■□□□ 1.28
KCNN4-206ENST00000600408 RTF1Q92541 710 aaKnown RBP23.06■■□□□ 1.28
KCNN4-206ENST00000600408 CAMKK2Q96RR4 588 aa23.06■■□□□ 1.28
KCNN4-206ENST00000600408 SMARCC1Q92922 1105 aaPredicted RBP23.05■■□□□ 1.28
KCNN4-206ENST00000600408 RUNDC1Q96C34 613 aa23.05■■□□□ 1.28
KCNN4-206ENST00000600408 RNMTO43148 476 aaKnown RBP23.04■■□□□ 1.28
KCNN4-206ENST00000600408 HTATSF1O43719 755 aaKnown RBP23.04■■□□□ 1.28
KCNN4-206ENST00000600408 HMGB2P26583 209 aaKnown RBP23.04■■□□□ 1.28
KCNN4-206ENST00000600408 EZH2Q15910 746 aaKnown RBP23.04■■□□□ 1.28
KCNN4-206ENST00000600408 PIGBQ92521 554 aa23.04■■□□□ 1.28
KCNN4-206ENST00000600408 ITGB4P16144 1822 aa23.03■■□□□ 1.28
KCNN4-206ENST00000600408 NFE2L2Q16236 605 aa23.03■■□□□ 1.28
KCNN4-206ENST00000600408 CCDC184Q52MB2 194 aa23.03■■□□□ 1.28
KCNN4-206ENST00000600408 SCN11AQ9UI33 1791 aa23.03■■□□□ 1.28
KCNN4-206ENST00000600408 ADAMTS7Q9UKP4 1686 aa23.01■■□□□ 1.27
KCNN4-206ENST00000600408 TEFQ10587 303 aa23.01■■□□□ 1.27
KCNN4-206ENST00000600408 PNISRQ8TF01 805 aaKnown RBP23.01■■□□□ 1.27
KCNN4-206ENST00000600408 SLC52A2Q9HAB3 445 aa23.01■■□□□ 1.27
KCNN4-206ENST00000600408 MRC1P22897 1456 aa23■■□□□ 1.27
KCNN4-206ENST00000600408 LMOD3Q0VAK6 560 aa23■■□□□ 1.27
KCNN4-206ENST00000600408 TXNRD1Q16881 649 aa23■■□□□ 1.27
KCNN4-206ENST00000600408 SLC27A3Q5K4L6 730 aa23■■□□□ 1.27
KCNN4-206ENST00000600408 CCDC146Q8IYE0 955 aa23■■□□□ 1.27
KCNN4-206ENST00000600408 NFATC2IPQ8NCF5 419 aa23■■□□□ 1.27
KCNN4-206ENST00000600408 LGR6Q9HBX8 967 aa23■■□□□ 1.27
KCNN4-206ENST00000600408 PALLDQ8WX93 1383 aa23■■□□□ 1.27
KCNN4-206ENST00000600408 RREB1Q92766 1687 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms