RNA–Protein interactions for RNA: ENST00000599316.1

AC243960.3-201, humanhuman

TSL 4 BASIC

Gene AC243960.3, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243960.3-201ENST00000599316 POLD1P28340 1107 aa11.12□□□□□ -0.63
AC243960.3-201ENST00000599316 ARHGEF25Q86VW2 580 aa11.12□□□□□ -0.63
AC243960.3-201ENST00000599316 RGPD5Q99666 1765 aa11.12□□□□□ -0.63
AC243960.3-201ENST00000599316 KIAA1210Q9ULL0 1709 aa11.12□□□□□ -0.63
AC243960.3-201ENST00000599316 USP6P35125 1406 aa11.11□□□□□ -0.63
AC243960.3-201ENST00000599316 SOX12O15370 315 aa11.11□□□□□ -0.63
AC243960.3-201ENST00000599316 GALR2O43603 387 aaPredicted RBP11.11□□□□□ -0.63
AC243960.3-201ENST00000599316 NBPF1Q3BBV0 1214 aa11.11□□□□□ -0.63
AC243960.3-201ENST00000599316 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
AC243960.3-201ENST00000599316 KLHL34Q8N239 644 aa11.11□□□□□ -0.63
AC243960.3-201ENST00000599316 SLC16A10Q8TF71 515 aa11.11□□□□□ -0.63
AC243960.3-201ENST00000599316 ACSBG1Q96GR2 724 aa11.11□□□□□ -0.63
AC243960.3-201ENST00000599316 SGIP1Q9BQI5 828 aa11.11□□□□□ -0.63
AC243960.3-201ENST00000599316 CCDC7Q96M83 1385 aa11.11□□□□□ -0.63
AC243960.3-201ENST00000599316 WNK3Q9BYP7 1800 aa11.11□□□□□ -0.63
AC243960.3-201ENST00000599316 COL18A1P39060 1754 aa11.11□□□□□ -0.63
AC243960.3-201ENST00000599316 EVC2Q86UK5 1308 aa11.1□□□□□ -0.63
AC243960.3-201ENST00000599316 MIER1Q8N108 512 aa11.1□□□□□ -0.63
AC243960.3-201ENST00000599316 SLIT3O75094 1523 aa11.09□□□□□ -0.63
AC243960.3-201ENST00000599316 MAP3K5Q99683 1374 aa11.09□□□□□ -0.63
AC243960.3-201ENST00000599316 CPSF1Q10570 1443 aaKnown RBP11.09□□□□□ -0.63
AC243960.3-201ENST00000599316 TTC21AQ8NDW8 1320 aa11.09□□□□□ -0.63
AC243960.3-201ENST00000599316 NLRP2Q9NX02 1062 aa11.08□□□□□ -0.64
AC243960.3-201ENST00000599316 TTC21BQ7Z4L5 1316 aa11.08□□□□□ -0.64
AC243960.3-201ENST00000599316 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
AC243960.3-201ENST00000599316 GRIN3BO60391 1043 aa11.07□□□□□ -0.64
AC243960.3-201ENST00000599316 IL2RBP14784 551 aa11.07□□□□□ -0.64
AC243960.3-201ENST00000599316 QRICH2Q9H0J4 1663 aa11.06□□□□□ -0.64
AC243960.3-201ENST00000599316 SLC27A3Q5K4L6 730 aa11.06□□□□□ -0.64
AC243960.3-201ENST00000599316 TFCP2L1Q9NZI6 479 aa11.06□□□□□ -0.64
AC243960.3-201ENST00000599316 TNS2Q63HR2 1409 aa11.05□□□□□ -0.64
AC243960.3-201ENST00000599316 PHF12Q96QT6 1004 aa11.05□□□□□ -0.64
AC243960.3-201ENST00000599316 PIK3C2AO00443 1686 aa11.04□□□□□ -0.64
AC243960.3-201ENST00000599316 NHSQ6T4R5 1651 aa11.04□□□□□ -0.64
AC243960.3-201ENST00000599316 CLCN6P51797 869 aa11.04□□□□□ -0.64
AC243960.3-201ENST00000599316 YTHDC1Q96MU7 727 aaKnown RBP11.04□□□□□ -0.64
AC243960.3-201ENST00000599316 BTAF1O14981 1849 aa11.04□□□□□ -0.64
AC243960.3-201ENST00000599316 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
AC243960.3-201ENST00000599316 HMGB2P26583 209 aaKnown RBP11.03□□□□□ -0.64
AC243960.3-201ENST00000599316 ZNF827Q17R98 1081 aa11.03□□□□□ -0.64
AC243960.3-201ENST00000599316 LRRC4BQ9NT99 713 aa11.03□□□□□ -0.64
AC243960.3-201ENST00000599316 TRPM1Q7Z4N2 1603 aa11.02□□□□□ -0.64
AC243960.3-201ENST00000599316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.02□□□□□ -0.65
AC243960.3-201ENST00000599316 DDX54Q8TDD1 881 aaKnown RBP11.02□□□□□ -0.65
AC243960.3-201ENST00000599316 ABCC6O95255 1503 aa11.01□□□□□ -0.65
AC243960.3-201ENST00000599316 ANKRD24Q8TF21 1146 aa11.01□□□□□ -0.65
AC243960.3-201ENST00000599316 SYTL4Q96C24 671 aaPredicted RBP11.01□□□□□ -0.65
AC243960.3-201ENST00000599316 ERBB3P21860 1342 aa11.01□□□□□ -0.65
AC243960.3-201ENST00000599316 QSER1Q2KHR3 1735 aa11.01□□□□□ -0.65
AC243960.3-201ENST00000599316 POTEB2H3BUK9 544 aa11□□□□□ -0.65
AC243960.3-201ENST00000599316 GPBP1L1Q9HC44 474 aaPredicted RBP11□□□□□ -0.65
AC243960.3-201ENST00000599316 DDX10Q13206 875 aaKnown RBP10.99□□□□□ -0.65
AC243960.3-201ENST00000599316 HDGFL2Q7Z4V5 671 aaPredicted RBP10.99□□□□□ -0.65
AC243960.3-201ENST00000599316 NLGN2Q8NFZ4 835 aa10.99□□□□□ -0.65
AC243960.3-201ENST00000599316 PNPLA7Q6ZV29 1317 aa10.99□□□□□ -0.65
AC243960.3-201ENST00000599316 PAPPAQ13219 1627 aa10.98□□□□□ -0.65
AC243960.3-201ENST00000599316 PRIM1P49642 420 aaKnown RBP10.98□□□□□ -0.65
AC243960.3-201ENST00000599316 EIF4G2P78344 907 aaKnown RBP eCLIP10.98□□□□□ -0.65
AC243960.3-201ENST00000599316 PLSCR2Q9NRY7 297 aa10.98□□□□□ -0.65
AC243960.3-201ENST00000599316 NFAT5O94916 1531 aa10.98□□□□□ -0.65
AC243960.3-201ENST00000599316 LTN1O94822 1766 aa10.98□□□□□ -0.65
AC243960.3-201ENST00000599316 ANP32CO43423 234 aa10.97□□□□□ -0.65
AC243960.3-201ENST00000599316 TMC1Q8TDI8 760 aa10.97□□□□□ -0.65
AC243960.3-201ENST00000599316 L3MBTL2Q969R5 705 aa10.97□□□□□ -0.65
AC243960.3-201ENST00000599316 CCNL1Q9UK58 526 aaPredicted RBP10.97□□□□□ -0.65
AC243960.3-201ENST00000599316 USP31Q70CQ4 1352 aa10.97□□□□□ -0.65
AC243960.3-201ENST00000599316 COL24A1Q17RW2 1714 aa10.96□□□□□ -0.65
AC243960.3-201ENST00000599316 YBX3P16989 372 aaKnown RBP eCLIP10.96□□□□□ -0.65
AC243960.3-201ENST00000599316 MNX1P50219 401 aaPredicted RBP10.96□□□□□ -0.65
AC243960.3-201ENST00000599316 KCNQ4P56696 695 aa10.96□□□□□ -0.65
AC243960.3-201ENST00000599316 NME9Q86XW9 330 aa10.96□□□□□ -0.65
AC243960.3-201ENST00000599316 FLAD1Q8NFF5 587 aa10.96□□□□□ -0.65
AC243960.3-201ENST00000599316 OTUD5Q96G74 571 aa10.96□□□□□ -0.65
AC243960.3-201ENST00000599316 LTV1Q96GA3 475 aaPredicted RBP10.96□□□□□ -0.65
AC243960.3-201ENST00000599316 ROCK2O75116 1388 aaKnown RBP10.95□□□□□ -0.66
AC243960.3-201ENST00000599316 HSPA6P17066 643 aa10.95□□□□□ -0.66
AC243960.3-201ENST00000599316 ZCRB1Q8TBF4 217 aaKnown RBP10.95□□□□□ -0.66
AC243960.3-201ENST00000599316 IP6K1Q92551 441 aa10.95□□□□□ -0.66
AC243960.3-201ENST00000599316 TERF2IPQ9NYB0 399 aa10.95□□□□□ -0.66
AC243960.3-201ENST00000599316 CD2APQ9Y5K6 639 aa10.95□□□□□ -0.66
AC243960.3-201ENST00000599316 SHANK3Q9BYB0 1731 aa10.95□□□□□ -0.66
AC243960.3-201ENST00000599316 UTRNP46939 3433 aa10.94□□□□□ -0.66
AC243960.3-201ENST00000599316 USP47Q96K76 1375 aa10.94□□□□□ -0.66
AC243960.3-201ENST00000599316 COL23A1Q86Y22 540 aaPredicted RBP10.94□□□□□ -0.66
AC243960.3-201ENST00000599316 ATP10DQ9P241 1426 aa10.93□□□□□ -0.66
AC243960.3-201ENST00000599316 TUBGCP6Q96RT7 1819 aa10.93□□□□□ -0.66
AC243960.3-201ENST00000599316 ANKRD36BQ8N2N9 1353 aa10.93□□□□□ -0.66
AC243960.3-201ENST00000599316 MON2Q7Z3U7 1717 aa10.93□□□□□ -0.66
AC243960.3-201ENST00000599316 AMPHP49418 695 aa10.93□□□□□ -0.66
AC243960.3-201ENST00000599316 ZNF526Q8TF50 670 aaPredicted RBP10.93□□□□□ -0.66
AC243960.3-201ENST00000599316 MSL1Q68DK7 614 aa10.92□□□□□ -0.66
AC243960.3-201ENST00000599316 LY75O60449 1722 aa10.92□□□□□ -0.66
AC243960.3-201ENST00000599316 FAM208AQ9UK61 1670 aaKnown RBP10.92□□□□□ -0.66
AC243960.3-201ENST00000599316 HSPA5P11021 654 aaKnown RBP10.91□□□□□ -0.66
AC243960.3-201ENST00000599316 COG3Q96JB2 828 aa10.91□□□□□ -0.66
AC243960.3-201ENST00000599316 SLC12A5Q9H2X9 1139 aa10.91□□□□□ -0.66
AC243960.3-201ENST00000599316 USP54Q70EL1 1684 aa10.9□□□□□ -0.66
AC243960.3-201ENST00000599316 RAPGEF4Q8WZA2 1011 aa10.9□□□□□ -0.66
AC243960.3-201ENST00000599316 EDC4Q6P2E9 1401 aaKnown RBP10.9□□□□□ -0.66
AC243960.3-201ENST00000599316 SBNO2Q9Y2G9 1366 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms