RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 NBPF4Q96M43 638 aa27.03■■□□□ 1.92
IRF3-222ENST00000599144 TFCP2L1Q9NZI6 479 aa27.03■■□□□ 1.92
IRF3-222ENST00000599144 FAM208AQ9UK61 1670 aaKnown RBP27.02■■□□□ 1.92
IRF3-222ENST00000599144 FYB1O15117 783 aa27■■□□□ 1.91
IRF3-222ENST00000599144 GPR162Q16538 588 aa27■■□□□ 1.91
IRF3-222ENST00000599144 PELP1Q8IZL8 1130 aaKnown RBP27■■□□□ 1.91
IRF3-222ENST00000599144 DOT1LQ8TEK3 1739 aa26.99■■□□□ 1.91
IRF3-222ENST00000599144 MAP3K5Q99683 1374 aa26.98■■□□□ 1.91
IRF3-222ENST00000599144 NLGN2Q8NFZ4 835 aa26.98■■□□□ 1.91
IRF3-222ENST00000599144 CCNL1Q9UK58 526 aaPredicted RBP26.98■■□□□ 1.91
IRF3-222ENST00000599144 KAT6BQ8WYB5 2073 aa26.97■■□□□ 1.91
IRF3-222ENST00000599144 RGPD2P0DJD1 1756 aa26.97■■□□□ 1.91
IRF3-222ENST00000599144 UTRNP46939 3433 aa26.97■■□□□ 1.91
IRF3-222ENST00000599144 POLD1P28340 1107 aa26.97■■□□□ 1.91
IRF3-222ENST00000599144 SLC16A10Q8TF71 515 aa26.96■■□□□ 1.91
IRF3-222ENST00000599144 MSH5O43196 834 aa26.95■■□□□ 1.9
IRF3-222ENST00000599144 HSP90AB2PQ58FF8 381 aa26.95■■□□□ 1.9
IRF3-222ENST00000599144 SHANK3Q9BYB0 1731 aa26.95■■□□□ 1.9
IRF3-222ENST00000599144 RTL1A6NKG5 1358 aa26.94■■□□□ 1.9
IRF3-222ENST00000599144 MSL1Q68DK7 614 aa26.93■■□□□ 1.9
IRF3-222ENST00000599144 COL23A1Q86Y22 540 aaPredicted RBP26.93■■□□□ 1.9
IRF3-222ENST00000599144 TMF1P82094 1093 aa26.92■■□□□ 1.9
IRF3-222ENST00000599144 RAPGEF4Q8WZA2 1011 aa26.92■■□□□ 1.9
IRF3-222ENST00000599144 USP47Q96K76 1375 aa26.92■■□□□ 1.9
IRF3-222ENST00000599144 TATP17735 454 aaPredicted RBP26.9■■□□□ 1.9
IRF3-222ENST00000599144 TUBGCP6Q96RT7 1819 aa26.9■■□□□ 1.9
IRF3-222ENST00000599144 SMG6Q86US8 1419 aaKnown RBP26.88■■□□□ 1.89
IRF3-222ENST00000599144 EMILIN1Q9Y6C2 1016 aa26.87■■□□□ 1.89
IRF3-222ENST00000599144 LY75O60449 1722 aa26.87■■□□□ 1.89
IRF3-222ENST00000599144 CARD14Q9BXL6 1004 aa26.86■■□□□ 1.89
IRF3-222ENST00000599144 INSRP06213 1382 aa26.85■■□□□ 1.89
IRF3-222ENST00000599144 SENP3-EIF4A1A0A087X0R7 540 aa26.85■■□□□ 1.89
IRF3-222ENST00000599144 SLC24A1O60721 1099 aa26.85■■□□□ 1.89
IRF3-222ENST00000599144 MPRIPQ6WCQ1 1025 aa26.85■■□□□ 1.89
IRF3-222ENST00000599144 SMIM5Q71RC9 77 aa26.85■■□□□ 1.89
IRF3-222ENST00000599144 QSER1Q2KHR3 1735 aa26.85■■□□□ 1.89
IRF3-222ENST00000599144 CYP27B1O15528 508 aa26.84■■□□□ 1.89
IRF3-222ENST00000599144 YBX3P16989 372 aaKnown RBP eCLIP26.84■■□□□ 1.89
IRF3-222ENST00000599144 C1QTNF8P60827 252 aa26.83■■□□□ 1.89
IRF3-222ENST00000599144 CGNL1Q0VF96 1302 aa26.83■■□□□ 1.89
IRF3-222ENST00000599144 FLT4P35916 1363 aa26.83■■□□□ 1.88
IRF3-222ENST00000599144 PALLDQ8WX93 1383 aa26.83■■□□□ 1.88
IRF3-222ENST00000599144 PCDH11XQ9BZA7 1347 aa26.82■■□□□ 1.88
IRF3-222ENST00000599144 PCDH11YQ9BZA8 1340 aa26.82■■□□□ 1.88
IRF3-222ENST00000599144 PPM1GO15355 546 aaPredicted RBP26.81■■□□□ 1.88
IRF3-222ENST00000599144 AMIGO3Q86WK7 504 aa26.81■■□□□ 1.88
IRF3-222ENST00000599144 COL24A1Q17RW2 1714 aa26.81■■□□□ 1.88
IRF3-222ENST00000599144 NSD3Q9BZ95 1437 aa26.8■■□□□ 1.88
IRF3-222ENST00000599144 CHD4Q14839 1912 aa26.77■■□□□ 1.88
IRF3-222ENST00000599144 WWC3Q9ULE0 1092 aa26.76■■□□□ 1.87
IRF3-222ENST00000599144 PHF14O94880 888 aa26.75■■□□□ 1.87
IRF3-222ENST00000599144 PIGBQ92521 554 aa26.75■■□□□ 1.87
IRF3-222ENST00000599144 CDCA8Q53HL2 280 aa26.74■■□□□ 1.87
IRF3-222ENST00000599144 KIF20BQ96Q89 1820 aa26.74■■□□□ 1.87
IRF3-222ENST00000599144 TOGARAM1Q9Y4F4 1720 aa26.73■■□□□ 1.87
IRF3-222ENST00000599144 GIGYF1O75420 1035 aaPredicted RBP26.73■■□□□ 1.87
IRF3-222ENST00000599144 C5P01031 1676 aa26.73■■□□□ 1.87
IRF3-222ENST00000599144 AK7Q96M32 723 aa26.72■■□□□ 1.87
IRF3-222ENST00000599144 KIF24Q5T7B8 1368 aa26.71■■□□□ 1.87
IRF3-222ENST00000599144 POLR3GLQ9BT43 218 aa26.71■■□□□ 1.87
IRF3-222ENST00000599144 EYA1Q99502 592 aa26.7■■□□□ 1.86
IRF3-222ENST00000599144 GRIN3BO60391 1043 aa26.69■■□□□ 1.86
IRF3-222ENST00000599144 LINC00116Q8NCU8 138 aa26.68■■□□□ 1.86
IRF3-222ENST00000599144 SMARCC1Q92922 1105 aaPredicted RBP26.68■■□□□ 1.86
IRF3-222ENST00000599144 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.67■■□□□ 1.86
IRF3-222ENST00000599144 TNNT2P45379 298 aaPredicted RBP26.67■■□□□ 1.86
IRF3-222ENST00000599144 FLAD1Q8NFF5 587 aa26.67■■□□□ 1.86
IRF3-222ENST00000599144 GOLGB1Q14789 3259 aaKnown RBP26.66■■□□□ 1.86
IRF3-222ENST00000599144 TRIM26Q12899 539 aaPredicted RBP26.66■■□□□ 1.86
IRF3-222ENST00000599144 NKX1-1Q15270 411 aaPredicted RBP26.66■■□□□ 1.86
IRF3-222ENST00000599144 ASAP1Q9ULH1 1129 aa26.66■■□□□ 1.86
IRF3-222ENST00000599144 SPG7Q9UQ90 795 aa26.66■■□□□ 1.86
IRF3-222ENST00000599144 CD2APQ9Y5K6 639 aa26.66■■□□□ 1.86
IRF3-222ENST00000599144 WASHC2AQ641Q2 1341 aa26.65■■□□□ 1.86
IRF3-222ENST00000599144 NCAPD2Q15021 1401 aa26.65■■□□□ 1.86
IRF3-222ENST00000599144 C4BP0C0L5 1744 aa26.65■■□□□ 1.86
IRF3-222ENST00000599144 ITPK1Q13572 414 aa26.65■■□□□ 1.86
IRF3-222ENST00000599144 POLKQ9UBT6 870 aa26.65■■□□□ 1.86
IRF3-222ENST00000599144 LOC102724428A0A0B4J2F2 783 aa26.64■■□□□ 1.86
IRF3-222ENST00000599144 SIK1P57059 783 aa26.64■■□□□ 1.86
IRF3-222ENST00000599144 PKD1L3Q7Z443 1732 aa26.64■■□□□ 1.85
IRF3-222ENST00000599144 ATP10DQ9P241 1426 aa26.64■■□□□ 1.85
IRF3-222ENST00000599144 TMOD3Q9NYL9 352 aa26.63■■□□□ 1.85
IRF3-222ENST00000599144 TAF1LQ8IZX4 1826 aa26.61■■□□□ 1.85
IRF3-222ENST00000599144 PHKG2P15735 406 aa26.61■■□□□ 1.85
IRF3-222ENST00000599144 ZNF526Q8TF50 670 aaPredicted RBP26.61■■□□□ 1.85
IRF3-222ENST00000599144 EIF4A2Q14240 407 aaKnown RBP26.6■■□□□ 1.85
IRF3-222ENST00000599144 IGSF1Q8N6C5 1336 aa26.6■■□□□ 1.85
IRF3-222ENST00000599144 ITGB4P16144 1822 aa26.6■■□□□ 1.85
IRF3-222ENST00000599144 GNPATO15228 680 aa26.59■■□□□ 1.85
IRF3-222ENST00000599144 ATP6V1AP38606 617 aa26.59■■□□□ 1.85
IRF3-222ENST00000599144 IFNL2Q8IZJ0 200 aa26.58■■□□□ 1.85
IRF3-222ENST00000599144 ATG3Q9NT62 314 aa26.58■■□□□ 1.85
IRF3-222ENST00000599144 SSFA2P28290 1259 aa26.57■■□□□ 1.84
IRF3-222ENST00000599144 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.55■■□□□ 1.84
IRF3-222ENST00000599144 ANKRD26Q9UPS8 1709 aa26.55■■□□□ 1.84
IRF3-222ENST00000599144 MAP2P11137 1827 aaKnown RBP26.53■■□□□ 1.84
IRF3-222ENST00000599144 UBR3Q6ZT12 1888 aa26.53■■□□□ 1.84
IRF3-222ENST00000599144 SLC4A9Q96Q91 983 aa26.53■■□□□ 1.84
IRF3-222ENST00000599144 PCGF6Q9BYE7 350 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms